Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.15□□□□□ -2.59
SPG11Q96JI7 UBL5P4-201ENST00000562584 236 ntBASIC-1.15□□□□□ -2.59
SPG11Q96JI7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.15□□□□□ -2.59
SPG11Q96JI7 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.16□□□□□ -2.59
SPG11Q96JI7 MTND2P6-201ENST00000455337 1030 ntBASIC-1.16□□□□□ -2.59
SPG11Q96JI7 AC091133.4-201ENST00000511142 308 ntBASIC-1.16□□□□□ -2.59
SPG11Q96JI7 RNA5SP20-201ENST00000515976 84 ntBASIC-1.16□□□□□ -2.59
SPG11Q96JI7 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.16□□□□□ -2.59
SPG11Q96JI7 RNU6-324P-201ENST00000363957 106 ntBASIC-1.16□□□□□ -2.6
SPG11Q96JI7 RNU6-597P-201ENST00000365620 102 ntBASIC-1.16□□□□□ -2.6
SPG11Q96JI7 RNA5SP86-201ENST00000390869 98 ntBASIC-1.16□□□□□ -2.6
SPG11Q96JI7 AC010587.1-201ENST00000505809 469 ntBASIC-1.16□□□□□ -2.6
SPG11Q96JI7 RNU6-830P-201ENST00000516353 107 ntBASIC-1.16□□□□□ -2.6
SPG11Q96JI7 RNU7-13P-201ENST00000516413 62 ntBASIC-1.16□□□□□ -2.6
SPG11Q96JI7 MTND1P35-201ENST00000526739 508 ntBASIC-1.16□□□□□ -2.6
SPG11Q96JI7 SNORD115-13-201ENST00000363358 82 ntBASIC-1.17□□□□□ -2.6
SPG11Q96JI7 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.17□□□□□ -2.6
SPG11Q96JI7 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.17□□□□□ -2.6
SPG11Q96JI7 MIR626-201ENST00000385032 94 ntBASIC-1.17□□□□□ -2.6
SPG11Q96JI7 SNORD75.2-201ENST00000408784 58 ntBASIC-1.17□□□□□ -2.6
SPG11Q96JI7 RNU6-329P-201ENST00000459618 107 ntBASIC-1.17□□□□□ -2.6
SPG11Q96JI7 RNU6-583P-201ENST00000516012 92 ntBASIC-1.17□□□□□ -2.6
SPG11Q96JI7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.17□□□□□ -2.6
SPG11Q96JI7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.17□□□□□ -2.6
SPG11Q96JI7 AC087752.4-201ENST00000605911 462 ntBASIC-1.17□□□□□ -2.6
SPG11Q96JI7 SNORD115-16-201ENST00000363887 82 ntBASIC-1.17□□□□□ -2.6
SPG11Q96JI7 SNORA72.3-201ENST00000365074 132 ntBASIC-1.17□□□□□ -2.6
SPG11Q96JI7 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.17□□□□□ -2.6
SPG11Q96JI7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.17□□□□□ -2.6
SPG11Q96JI7 MTCO2P27-201ENST00000420740 428 ntBASIC-1.17□□□□□ -2.6
SPG11Q96JI7 MTND3P25-201ENST00000509243 135 ntBASIC-1.17□□□□□ -2.6
SPG11Q96JI7 PART1_1.1-201ENST00000611761 217 ntBASIC-1.17□□□□□ -2.6
SPG11Q96JI7 SNORD115-27-201ENST00000364430 82 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 RNU6-291P-201ENST00000384720 107 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 MTCYBP8-201ENST00000422855 651 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.18□□□□□ -2.6
SPG11Q96JI7 snoU13.6-201ENST00000458785 104 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 RNU6-685P-201ENST00000517088 95 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 YWHAEP2-201ENST00000580066 112 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 U6.109-201ENST00000636749 87 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 AC099654.12-201ENST00000639868 649 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
SPG11Q96JI7 RNA5SP405-201ENST00000363059 114 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 RNU6-164P-201ENST00000364604 103 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 SNORA27.3-201ENST00000364937 134 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 SNORD50B-201ENST00000364995 70 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 MIR582-201ENST00000365731 98 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 RNU6-767P-201ENST00000384132 107 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 RNU6-541P-201ENST00000384709 110 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 AC023449.1-201ENST00000454464 154 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 RNU7-25P-201ENST00000516544 62 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 RNU6-107P-201ENST00000516643 102 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 RNU6-958P-201ENST00000516995 106 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 AL137161.1-201ENST00000532231 390 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 MTND1P24-201ENST00000552175 861 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 AC093783.1-201ENST00000612976 329 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 AL157770.1-201ENST00000623049 439 ntBASIC-1.18□□□□□ -2.6
SPG11Q96JI7 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 RNU6-136P-201ENST00000384663 107 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 RPL39P5-202ENST00000512505 151 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 RNU7-51P-201ENST00000516560 62 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 SNORA25.16-201ENST00000516741 121 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 AC005776.1-201ENST00000603164 290 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 AC005828.6-201ENST00000606610 232 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 RNU6-949P-201ENST00000384040 107 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 RNU6-481P-201ENST00000384194 107 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 RNU6-607P-201ENST00000411283 108 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 TPTE2P1-204ENST00000435256 593 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 AC069113.1-201ENST00000517763 267 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 RNU6-323P-201ENST00000521915 107 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 AC072039.2-201ENST00000608883 439 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 AC092574.1-201ENST00000609771 420 ntBASIC-1.19□□□□□ -2.6
SPG11Q96JI7 RNU6-227P-201ENST00000362865 103 ntBASIC-1.2□□□□□ -2.6
SPG11Q96JI7 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.2□□□□□ -2.6
SPG11Q96JI7 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.2□□□□□ -2.6
SPG11Q96JI7 MIR487B-201ENST00000385021 84 ntBASIC-1.2□□□□□ -2.6
SPG11Q96JI7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.2□□□□□ -2.6
SPG11Q96JI7 SERF1AP1-201ENST00000514575 187 ntBASIC-1.2□□□□□ -2.6
SPG11Q96JI7 SNORD11B-201ENST00000607707 90 ntBASIC-1.2□□□□□ -2.6
SPG11Q96JI7 SNORA20.2-201ENST00000383922 131 ntBASIC-1.2□□□□□ -2.6
SPG11Q96JI7 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.2□□□□□ -2.6
SPG11Q96JI7 MIR652-201ENST00000385278 98 ntBASIC-1.2□□□□□ -2.6
SPG11Q96JI7 SNORD12C-201ENST00000386307 89 ntBASIC-1.2□□□□□ -2.6
SPG11Q96JI7 SNORA26.6-201ENST00000391256 115 ntBASIC-1.2□□□□□ -2.6
SPG11Q96JI7 RNU2-14P-201ENST00000411053 191 ntBASIC-1.2□□□□□ -2.6
SPG11Q96JI7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.2□□□□□ -2.6
SPG11Q96JI7 MIR548H5-201ENST00000580314 60 ntBASIC-1.2□□□□□ -2.6
SPG11Q96JI7 SNORD14E-201ENST00000364009 85 ntBASIC-1.21□□□□□ -2.6
SPG11Q96JI7 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.21□□□□□ -2.6
SPG11Q96JI7 RPS27AP14-201ENST00000422868 454 ntBASIC-1.21□□□□□ -2.6
SPG11Q96JI7 MTND4P24-201ENST00000424002 397 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms