Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC087499.7-201ENST00000441958 109 ntBASIC0.16□□□□□ -2.38
ECHDC3Q96DC8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.16□□□□□ -2.38
ECHDC3Q96DC8 AC023932.2-201ENST00000603176 175 ntBASIC0.16□□□□□ -2.38
ECHDC3Q96DC8 AC084782.3-201ENST00000612282 578 ntBASIC0.16□□□□□ -2.38
ECHDC3Q96DC8 AC073869.6-201ENST00000640656 341 ntBASIC0.16□□□□□ -2.38
ECHDC3Q96DC8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
ECHDC3Q96DC8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.15□□□□□ -2.38
ECHDC3Q96DC8 Y_RNA.242-201ENST00000364473 110 ntBASIC0.15□□□□□ -2.39
ECHDC3Q96DC8 RNA5SP517-201ENST00000364724 117 ntBASIC0.15□□□□□ -2.39
ECHDC3Q96DC8 MIR802-201ENST00000390235 94 ntBASIC0.15□□□□□ -2.39
ECHDC3Q96DC8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.15□□□□□ -2.39
ECHDC3Q96DC8 snoU13.16-201ENST00000459350 104 ntBASIC0.15□□□□□ -2.39
ECHDC3Q96DC8 RNU6-437P-201ENST00000459408 95 ntBASIC0.15□□□□□ -2.39
ECHDC3Q96DC8 AC006600.1-201ENST00000572529 153 ntBASIC0.15□□□□□ -2.39
ECHDC3Q96DC8 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.15□□□□□ -2.39
ECHDC3Q96DC8 uc_338.6-201ENST00000613544 171 ntBASIC0.15□□□□□ -2.39
ECHDC3Q96DC8 MIR6718-201ENST00000616153 80 ntBASIC0.15□□□□□ -2.39
ECHDC3Q96DC8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.14□□□□□ -2.39
ECHDC3Q96DC8 Y_RNA.331-201ENST00000365267 102 ntBASIC0.14□□□□□ -2.39
ECHDC3Q96DC8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
ECHDC3Q96DC8 Y_RNA.474-201ENST00000384341 102 ntBASIC0.14□□□□□ -2.39
ECHDC3Q96DC8 MIR1278-201ENST00000408753 81 ntBASIC0.14□□□□□ -2.39
ECHDC3Q96DC8 MIR1197-201ENST00000408818 88 ntBASIC0.14□□□□□ -2.39
ECHDC3Q96DC8 SNORA40.8-201ENST00000411034 126 ntBASIC0.14□□□□□ -2.39
ECHDC3Q96DC8 RNA5SP127-201ENST00000411051 133 ntBASIC0.14□□□□□ -2.39
ECHDC3Q96DC8 MTND1P34-201ENST00000438556 671 ntBASIC0.14□□□□□ -2.39
ECHDC3Q96DC8 AC099799.1-201ENST00000439809 192 ntBASIC0.14□□□□□ -2.39
ECHDC3Q96DC8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.14□□□□□ -2.39
ECHDC3Q96DC8 SNRPGP12-201ENST00000449481 213 ntBASIC0.14□□□□□ -2.39
ECHDC3Q96DC8 RPL23AP91-201ENST00000569211 455 ntBASIC0.14□□□□□ -2.39
ECHDC3Q96DC8 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.14□□□□□ -2.39
ECHDC3Q96DC8 RNU6-490P-201ENST00000362985 107 ntBASIC0.13□□□□□ -2.39
ECHDC3Q96DC8 MIR628-201ENST00000385229 95 ntBASIC0.13□□□□□ -2.39
ECHDC3Q96DC8 SNORA36B-201ENST00000410438 131 ntBASIC0.13□□□□□ -2.39
ECHDC3Q96DC8 AC024067.1-201ENST00000426199 223 ntBASIC0.13□□□□□ -2.39
ECHDC3Q96DC8 RNU6-1007P-201ENST00000516586 107 ntBASIC0.13□□□□□ -2.39
ECHDC3Q96DC8 AP003327.1-201ENST00000529684 127 ntBASIC0.13□□□□□ -2.39
ECHDC3Q96DC8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.13□□□□□ -2.39
ECHDC3Q96DC8 AC022523.2-201ENST00000561045 150 ntBASIC0.13□□□□□ -2.39
ECHDC3Q96DC8 AC090897.1-201ENST00000580909 226 ntBASIC0.13□□□□□ -2.39
ECHDC3Q96DC8 VN1R91P-201ENST00000594377 169 ntBASIC0.13□□□□□ -2.39
ECHDC3Q96DC8 AL080274.1-201ENST00000605565 220 ntBASIC0.13□□□□□ -2.39
ECHDC3Q96DC8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.13□□□□□ -2.39
ECHDC3Q96DC8 SNORD118-201ENST00000363593 134 ntBASIC0.12□□□□□ -2.39
ECHDC3Q96DC8 RNA5SP457-201ENST00000363657 124 ntBASIC0.12□□□□□ -2.39
ECHDC3Q96DC8 Y_RNA.258-201ENST00000364613 105 ntBASIC0.12□□□□□ -2.39
ECHDC3Q96DC8 Y_RNA.314-201ENST00000365114 102 ntBASIC0.12□□□□□ -2.39
ECHDC3Q96DC8 Y_RNA.547-201ENST00000384654 119 ntBASIC0.12□□□□□ -2.39
ECHDC3Q96DC8 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
ECHDC3Q96DC8 MIR938-201ENST00000401216 83 ntBASIC0.12□□□□□ -2.39
ECHDC3Q96DC8 RNU7-62P-201ENST00000458856 62 ntBASIC0.12□□□□□ -2.39
ECHDC3Q96DC8 RNU7-141P-201ENST00000459304 62 ntBASIC0.12□□□□□ -2.39
ECHDC3Q96DC8 RNA5SP94-201ENST00000516917 108 ntBASIC0.12□□□□□ -2.39
ECHDC3Q96DC8 SNORA63C-201ENST00000364578 129 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 SNORD81.2-201ENST00000365153 76 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 Y_RNA.476-201ENST00000384347 108 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 Y_RNA.494-201ENST00000384432 111 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 RNA5SP63-201ENST00000391225 112 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 RNU2-14P-201ENST00000411053 191 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 AC096644.2-201ENST00000429278 159 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 MIR18B-201ENST00000454574 71 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 RNU6-863P-201ENST00000515989 104 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 SNORA25.12-201ENST00000516202 82 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 SNORA18.4-201ENST00000516440 124 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 AC008608.1-201ENST00000603910 127 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 AL355297.3-201ENST00000604082 446 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 AC093783.1-201ENST00000612976 329 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 MIR6740-201ENST00000618268 113 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 AL109933.3-201ENST00000619095 188 ntBASIC0.11□□□□□ -2.39
ECHDC3Q96DC8 RNA5SP62-201ENST00000363457 110 ntBASIC0.1□□□□□ -2.39
ECHDC3Q96DC8 RNU6-801P-201ENST00000364087 105 ntBASIC0.1□□□□□ -2.39
ECHDC3Q96DC8 SNORA72.4-201ENST00000384174 132 ntBASIC0.1□□□□□ -2.39
ECHDC3Q96DC8 SNORD63-201ENST00000384262 68 ntBASIC0.1□□□□□ -2.39
ECHDC3Q96DC8 RNU6-679P-201ENST00000391003 106 ntBASIC0.1□□□□□ -2.39
ECHDC3Q96DC8 Y_RNA.653-201ENST00000459091 95 ntBASIC0.1□□□□□ -2.39
ECHDC3Q96DC8 AC010655.3-201ENST00000478818 450 ntBASIC0.1□□□□□ -2.39
ECHDC3Q96DC8 RNU7-25P-201ENST00000516544 62 ntBASIC0.1□□□□□ -2.39
ECHDC3Q96DC8 AC005357.1-201ENST00000588399 301 ntBASIC0.1□□□□□ -2.39
ECHDC3Q96DC8 MIR8055-201ENST00000610739 97 ntBASIC0.1□□□□□ -2.39
ECHDC3Q96DC8 AC025253.1-201ENST00000613623 543 ntBASIC0.1□□□□□ -2.39
ECHDC3Q96DC8 AC022140.2-201ENST00000623500 188 ntBASIC0.1□□□□□ -2.39
ECHDC3Q96DC8 MIR4272-201ENST00000635924 64 ntBASIC0.1□□□□□ -2.39
ECHDC3Q96DC8 SNORD115-34-201ENST00000362441 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-12-201ENST00000362583 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-29-201ENST00000362834 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-9-201ENST00000362912 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-21-201ENST00000362963 81 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-14-201ENST00000363090 81 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-13-201ENST00000363358 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-41-201ENST00000363608 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-11-201ENST00000363616 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-5-201ENST00000363633 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-39-201ENST00000363694 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-4-201ENST00000363810 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-16-201ENST00000363887 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-6-201ENST00000363942 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-42-201ENST00000364273 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-15-201ENST00000364809 81 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-1-201ENST00000364961 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-26-201ENST00000365067 82 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms