Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 RNU7-25P-201ENST00000516544 62 ntBASIC0.38□□□□□ -2.35
UFD1Q92890 MIR4264-201ENST00000583520 66 ntBASIC0.38□□□□□ -2.35
UFD1Q92890 AC122108.2-201ENST00000611946 526 ntBASIC0.38□□□□□ -2.35
UFD1Q92890 Y_RNA.222-201ENST00000364264 102 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 Y_RNA.547-201ENST00000384654 119 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 MIR520H-201ENST00000385126 88 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 RNU6-308P-201ENST00000390957 107 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 SNORD83.1-201ENST00000411362 77 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 AC244023.1-201ENST00000426884 112 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.37□□□□□ -2.35
UFD1Q92890 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.37□□□□□ -2.35
UFD1Q92890 RNU6-977P-201ENST00000516411 103 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 RNU6-875P-201ENST00000516488 106 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.37□□□□□ -2.35
UFD1Q92890 MIR4771-2-201ENST00000577758 74 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 MIR4771-1-201ENST00000582617 74 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 MIR4452-201ENST00000583004 71 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 AC242498.1-201ENST00000604134 111 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 AC006157.1-201ENST00000611750 366 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 MIR6504-201ENST00000613520 61 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 AC022140.2-201ENST00000623500 188 ntBASIC0.37□□□□□ -2.35
UFD1Q92890 Y_RNA.4-201ENST00000362333 112 ntBASIC0.36□□□□□ -2.35
UFD1Q92890 Y_RNA.303-201ENST00000364998 94 ntBASIC0.36□□□□□ -2.35
UFD1Q92890 Y_RNA.315-201ENST00000365117 102 ntBASIC0.36□□□□□ -2.35
UFD1Q92890 Y_RNA.418-201ENST00000384029 102 ntBASIC0.36□□□□□ -2.35
UFD1Q92890 SNORA24-201ENST00000384096 131 ntBASIC0.36□□□□□ -2.35
UFD1Q92890 MIR548O-201ENST00000408583 114 ntBASIC0.36□□□□□ -2.35
UFD1Q92890 MIR1276-201ENST00000408707 83 ntBASIC0.36□□□□□ -2.35
UFD1Q92890 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
UFD1Q92890 AC023449.1-201ENST00000454464 154 ntBASIC0.36□□□□□ -2.35
UFD1Q92890 snoU13.16-201ENST00000459350 104 ntBASIC0.36□□□□□ -2.35
UFD1Q92890 AC107297.1-201ENST00000459991 176 ntBASIC0.36□□□□□ -2.35
UFD1Q92890 RNU6-1170P-201ENST00000515974 106 ntBASIC0.36□□□□□ -2.35
UFD1Q92890 RNU6-475P-201ENST00000516073 104 ntBASIC0.36□□□□□ -2.35
UFD1Q92890 Y_RNA.263-201ENST00000364659 114 ntBASIC0.35□□□□□ -2.35
UFD1Q92890 Y_RNA.356-201ENST00000365475 113 ntBASIC0.35□□□□□ -2.35
UFD1Q92890 RNU6-144P-201ENST00000383951 107 ntBASIC0.35□□□□□ -2.35
UFD1Q92890 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.35□□□□□ -2.35
UFD1Q92890 AC090844.1-201ENST00000422019 156 ntBASIC0.35□□□□□ -2.35
UFD1Q92890 AC015818.7-201ENST00000428754 109 ntBASIC0.35□□□□□ -2.35
UFD1Q92890 AC087499.7-201ENST00000441958 109 ntBASIC0.35□□□□□ -2.35
UFD1Q92890 RNU6-229P-201ENST00000516614 102 ntBASIC0.35□□□□□ -2.35
UFD1Q92890 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.35□□□□□ -2.35
UFD1Q92890 MIR4714-201ENST00000580728 77 ntBASIC0.35□□□□□ -2.35
UFD1Q92890 AL078603.1-201ENST00000603824 313 ntBASIC0.35□□□□□ -2.35
UFD1Q92890 LARP7P1-201ENST00000605576 316 ntBASIC0.35□□□□□ -2.35
UFD1Q92890 MIR8070-201ENST00000616510 88 ntBASIC0.35□□□□□ -2.35
UFD1Q92890 MIR18A-201ENST00000362310 71 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 Y_RNA.58-201ENST00000362807 102 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 SNORD113-8-201ENST00000363497 74 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 Y_RNA.154-201ENST00000363624 102 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 RNU6-1205P-201ENST00000363625 106 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 RNY3P1-201ENST00000365085 102 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
UFD1Q92890 RNU6-763P-201ENST00000390865 106 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 RNU6-1009P-201ENST00000390996 107 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 MIR1302-11-201ENST00000408051 138 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 MIR1302-9-201ENST00000408365 138 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 MIR1302-10-201ENST00000408734 138 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 MTCO2P12-201ENST00000427426 682 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
UFD1Q92890 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 RNU6-764P-201ENST00000516396 105 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 RNU6-1046P-201ENST00000516538 107 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 RNU7-149P-201ENST00000516739 59 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
UFD1Q92890 MIR4804-201ENST00000581683 73 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 MIR1302-2-201ENST00000607096 138 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 AL021707.8-201ENST00000609428 183 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 AC134878.1-201ENST00000619901 243 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
UFD1Q92890 SNORD115-34-201ENST00000362441 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 RNA5SP347-201ENST00000362445 119 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-12-201ENST00000362583 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-29-201ENST00000362834 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-9-201ENST00000362912 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-21-201ENST00000362963 81 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-14-201ENST00000363090 81 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-13-201ENST00000363358 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 Y_RNA.136-201ENST00000363444 102 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-41-201ENST00000363608 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-11-201ENST00000363616 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-5-201ENST00000363633 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-39-201ENST00000363694 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-4-201ENST00000363810 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-16-201ENST00000363887 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-6-201ENST00000363942 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 RNA5SP499-201ENST00000363982 119 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 Y_RNA.197-201ENST00000364004 102 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-42-201ENST00000364273 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 Y_RNA.224-201ENST00000364308 111 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 Y_RNA.241-201ENST00000364470 117 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-15-201ENST00000364809 81 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-1-201ENST00000364961 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-26-201ENST00000365067 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-10-201ENST00000365073 81 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 RNU4-45P-201ENST00000365469 141 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-43-201ENST00000365503 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 SNORD115-36-201ENST00000365629 82 ntBASIC0.33□□□□□ -2.36
UFD1Q92890 Y_RNA.494-201ENST00000384432 111 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms