Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 MIR518F-201ENST00000384973 87 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 MIR548H2-201ENST00000408874 88 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 RNU6-710P-201ENST00000410424 105 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 MCFD2P1-201ENST00000417812 300 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 AF228730.4-201ENST00000421457 183 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 FCF1P4-201ENST00000448326 183 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 snoU13.2-201ENST00000459201 104 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 MIR2053-201ENST00000459295 91 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 RNU4-49P-201ENST00000516080 140 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 AC127455.1-201ENST00000565496 145 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 AC022441.3-201ENST00000605737 136 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 Z97988.1-201ENST00000637697 135 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 RNU6-593P-201ENST00000364716 112 ntBASIC-0.26□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.26□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.26□□□□□ -2.45
CCDC112Q8NEF3 MIR563-201ENST00000385080 79 ntBASIC-0.26□□□□□ -2.45
CCDC112Q8NEF3 AC009161.1-201ENST00000417306 376 ntBASIC-0.26□□□□□ -2.45
CCDC112Q8NEF3 RPL7P42-201ENST00000481005 679 ntBASIC-0.26□□□□□ -2.45
CCDC112Q8NEF3 RNU6-848P-201ENST00000515948 107 ntBASIC-0.26□□□□□ -2.45
CCDC112Q8NEF3 RNU6-617P-201ENST00000516147 107 ntBASIC-0.26□□□□□ -2.45
CCDC112Q8NEF3 RNU6-473P-201ENST00000516164 107 ntBASIC-0.26□□□□□ -2.45
CCDC112Q8NEF3 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.26□□□□□ -2.45
CCDC112Q8NEF3 MIR6828-201ENST00000636181 60 ntBASIC-0.26□□□□□ -2.45
CCDC112Q8NEF3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 RNU6-99P-201ENST00000364721 107 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 SNORD116-9-201ENST00000384000 95 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 RNU6-187P-201ENST00000384139 106 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 SNORD116-3-201ENST00000384287 95 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 SNORD116-7-201ENST00000384404 95 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 SNORD116-5-201ENST00000384462 95 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 MIR593-201ENST00000384856 100 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 MIR643-201ENST00000385267 97 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 RNU6-913P-201ENST00000390913 95 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 AL590004.1-201ENST00000405321 300 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 MIR1265-201ENST00000408444 86 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 MIR1278-201ENST00000408753 81 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 AL512326.2-201ENST00000426359 151 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 AC109635.3-201ENST00000529536 185 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 MIR4802-201ENST00000581881 80 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 MIR4743-201ENST00000584576 69 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 AC022306.2-201ENST00000617563 647 ntBASIC-0.27□□□□□ -2.45
CCDC112Q8NEF3 MIR30D-201ENST00000362283 70 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 RNA5SP98-201ENST00000363158 137 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 RNU4-50P-201ENST00000364361 141 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 SNORA2A-201ENST00000383885 135 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 MIR214-201ENST00000385214 110 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 MIR548K-201ENST00000408406 116 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 AC098826.2-201ENST00000452011 651 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 RNU7-73P-201ENST00000458743 63 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 RNU7-67P-201ENST00000459003 62 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 SNORD11-201ENST00000459124 84 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 AC107297.1-201ENST00000459991 176 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 AC091951.2-201ENST00000500762 203 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 RNU6-470P-201ENST00000515954 104 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 RNU6-958P-201ENST00000516995 106 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 MIR2681-201ENST00000581814 105 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 AC005899.2-201ENST00000584353 90 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 MIR6086-201ENST00000638065 55 ntBASIC-0.28□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.29□□□□□ -2.46
CCDC112Q8NEF3 RNU6-756P-201ENST00000383997 107 ntBASIC-0.29□□□□□ -2.46
CCDC112Q8NEF3 RNY3P4-201ENST00000384428 101 ntBASIC-0.29□□□□□ -2.46
CCDC112Q8NEF3 SNORA69.1-201ENST00000390904 137 ntBASIC-0.29□□□□□ -2.46
CCDC112Q8NEF3 RNU6-602P-201ENST00000411155 105 ntBASIC-0.29□□□□□ -2.46
CCDC112Q8NEF3 MTND3P10-201ENST00000450967 341 ntBASIC-0.29□□□□□ -2.46
CCDC112Q8NEF3 RNU7-25P-201ENST00000516544 62 ntBASIC-0.29□□□□□ -2.46
CCDC112Q8NEF3 MIR8066-201ENST00000617280 78 ntBASIC-0.29□□□□□ -2.46
CCDC112Q8NEF3 MIR548AY-201ENST00000617669 107 ntBASIC-0.29□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-34-201ENST00000362441 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-12-201ENST00000362583 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-29-201ENST00000362834 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-9-201ENST00000362912 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-21-201ENST00000362963 81 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-14-201ENST00000363090 81 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-13-201ENST00000363358 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-41-201ENST00000363608 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-11-201ENST00000363616 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-5-201ENST00000363633 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-39-201ENST00000363694 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-4-201ENST00000363810 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 RNU6-674P-201ENST00000363831 107 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-16-201ENST00000363887 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-6-201ENST00000363942 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-42-201ENST00000364273 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 RNU4-75P-201ENST00000364621 146 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 RNU6-740P-201ENST00000364734 105 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-15-201ENST00000364809 81 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-1-201ENST00000364961 82 ntBASIC-0.3□□□□□ -2.46
CCDC112Q8NEF3 SNORD115-26-201ENST00000365067 82 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms