Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU7-41P-201ENST00000515917 61 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 SNORD79.1-201ENST00000516069 84 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 SNORD116-28-201ENST00000516123 91 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 AC008507.4-201ENST00000585464 127 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 AL049861.1-201ENST00000603130 150 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 AC136443.5-201ENST00000603741 370 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.14-201ENST00000362415 103 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 SNORA25.3-201ENST00000363205 127 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 RNU6-268P-201ENST00000364174 107 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.217-201ENST00000364214 105 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 RNU4-38P-201ENST00000364472 129 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.376-201ENST00000365638 108 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 RNU6-1160P-201ENST00000384546 104 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 RNU6-1011P-201ENST00000384668 107 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 MIR15B-201ENST00000385045 98 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 AL603910.2-201ENST00000407268 136 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.641-201ENST00000459414 105 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 MIR4724-201ENST00000579485 89 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 MIR4764-201ENST00000580680 88 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 AL008718.3-201ENST00000610217 321 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.812-201ENST00000610788 101 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.784-201ENST00000613803 101 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.787-201ENST00000616522 101 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.780-201ENST00000617336 101 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.801-201ENST00000619005 101 ntBASIC0.81□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.117-201ENST00000363294 101 ntBASIC0.8□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.226-201ENST00000364337 114 ntBASIC0.8□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.237-201ENST00000364439 102 ntBASIC0.8□□□□□ -2.28
CCDC71LQ8N9Z2 RNU6-1289P-201ENST00000384431 106 ntBASIC0.8□□□□□ -2.28
CCDC71LQ8N9Z2 SNORA75.2-201ENST00000391138 150 ntBASIC0.8□□□□□ -2.28
CCDC71LQ8N9Z2 SNORA75.3-201ENST00000391231 150 ntBASIC0.8□□□□□ -2.28
CCDC71LQ8N9Z2 MIR1287-201ENST00000408492 90 ntBASIC0.8□□□□□ -2.28
CCDC71LQ8N9Z2 AL442663.2-201ENST00000554385 511 ntBASIC0.8□□□□□ -2.28
CCDC71LQ8N9Z2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC71LQ8N9Z2 MIR548AR-201ENST00000582191 57 ntBASIC0.8□□□□□ -2.28
CCDC71LQ8N9Z2 AC008737.2-201ENST00000599446 118 ntBASIC0.8□□□□□ -2.28
CCDC71LQ8N9Z2 AC015726.2-201ENST00000620112 122 ntBASIC0.8□□□□□ -2.28
CCDC71LQ8N9Z2 RNU6-211P-201ENST00000384047 107 ntBASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 SNORA80D-201ENST00000384488 135 ntBASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 POLR2J4-204ENST00000418424 324 ntBASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 SNRPGP14-201ENST00000435400 219 ntBASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 AC245047.8-201ENST00000456455 284 ntBASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 RN7SKP164-201ENST00000516138 266 ntBASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 RNU7-43P-201ENST00000516554 64 ntBASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 RNU7-149P-201ENST00000516739 59 ntBASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 AC006006.1-201ENST00000603082 144 ntBASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 AC211469.2-201ENST00000605461 205 ntBASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 AL391903.3-201ENST00000612158 163 ntBASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 AP001282.2-201ENST00000616149 309 ntBASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 Pinc.1-201ENST00000616452 154 ntBASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 MIR8070-201ENST00000616510 88 ntBASIC0.79□□□□□ -2.28
CCDC71LQ8N9Z2 UBE2WP1-201ENST00000362030 340 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 MIR103A2-201ENST00000362154 78 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.44-201ENST00000362676 108 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 SNORA63C-201ENST00000364578 129 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.275-201ENST00000364726 110 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.330-201ENST00000365230 109 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.461-201ENST00000384263 103 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 MIR570-201ENST00000384917 97 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 SNORD28B-201ENST00000390993 75 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 RNA5SP496-201ENST00000391240 109 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 MIR1302-6-201ENST00000408466 90 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 RNU7-181P-201ENST00000517234 74 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 PRELID3BP2-201ENST00000605362 201 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.802-201ENST00000614892 130 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 uc_338.4-201ENST00000616635 176 ntBASIC0.78□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.24-201ENST00000362508 103 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 RNA5SP264-201ENST00000363115 107 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 Y_RNA.242-201ENST00000364473 110 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 RNU6-740P-201ENST00000364734 105 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 RNU1-36P-201ENST00000365130 165 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 Y_RNA.459-201ENST00000384251 102 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 Y_RNA.483-201ENST00000384380 101 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 Y_RNA.572-201ENST00000384757 98 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 MT-TW-201ENST00000387382 68 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 U8.17-201ENST00000391292 132 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 RNU6-651P-201ENST00000411040 105 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 AL020996.3-201ENST00000606617 222 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 AC006441.5-201ENST00000612680 209 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 MIR8062-201ENST00000621515 85 ntBASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
CCDC71LQ8N9Z2 Y_RNA.145-201ENST00000363527 102 ntBASIC0.76□□□□□ -2.29
CCDC71LQ8N9Z2 Y_RNA.176-201ENST00000363815 109 ntBASIC0.76□□□□□ -2.29
CCDC71LQ8N9Z2 Y_RNA.574-201ENST00000384766 95 ntBASIC0.76□□□□□ -2.29
CCDC71LQ8N9Z2 MIR19B1-201ENST00000384829 87 ntBASIC0.76□□□□□ -2.29
CCDC71LQ8N9Z2 Y_RNA.587-201ENST00000391210 103 ntBASIC0.76□□□□□ -2.29
CCDC71LQ8N9Z2 RNU7-21P-201ENST00000459430 62 ntBASIC0.76□□□□□ -2.29
CCDC71LQ8N9Z2 Y_RNA.673-201ENST00000516306 88 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms