Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.673-201ENST00000516306 88 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 AL442067.1-201ENST00000613261 223 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RTL3Q8N8U3 RNY4P28-201ENST00000365281 93 ntBASIC1.19□□□□□ -2.22
RTL3Q8N8U3 MIR626-201ENST00000385032 94 ntBASIC1.19□□□□□ -2.22
RTL3Q8N8U3 SNRPGP10-201ENST00000432323 225 ntBASIC1.19□□□□□ -2.22
RTL3Q8N8U3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.19□□□□□ -2.22
RTL3Q8N8U3 COX6CP14-201ENST00000469580 174 ntBASIC1.19□□□□□ -2.22
RTL3Q8N8U3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.19□□□□□ -2.22
RTL3Q8N8U3 SNORD116-28-201ENST00000516123 91 ntBASIC1.19□□□□□ -2.22
RTL3Q8N8U3 AC087685.1-201ENST00000587507 141 ntBASIC1.19□□□□□ -2.22
RTL3Q8N8U3 AC120024.3-201ENST00000603167 156 ntBASIC1.19□□□□□ -2.22
RTL3Q8N8U3 AL513534.2-201ENST00000603836 250 ntBASIC1.19□□□□□ -2.22
RTL3Q8N8U3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.19□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.802-201ENST00000614892 130 ntBASIC1.19□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.54-201ENST00000362766 105 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 SNORD68-201ENST00000363214 84 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.269-201ENST00000364685 89 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.292-201ENST00000364904 97 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 SNORA70.7-201ENST00000384159 133 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.477-201ENST00000384352 108 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 SNORA25-201ENST00000384384 134 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 MIR653-201ENST00000385279 96 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 RNA5SP496-201ENST00000391240 109 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 RNU6-383P-201ENST00000410864 94 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 RNU4-71P-201ENST00000516258 113 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 RNU6-922P-201ENST00000516753 99 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 RNU6-111P-201ENST00000517179 105 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.18□□□□□ -2.22
RTL3Q8N8U3 MIR4724-201ENST00000579485 89 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 AL365265.1-201ENST00000621045 234 ntBASIC1.18□□□□□ -2.22
RTL3Q8N8U3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RTL3Q8N8U3 RNU6-199P-201ENST00000362954 107 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 SNORD27-201ENST00000363981 72 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 RNU6-392P-201ENST00000364926 101 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 SNORD50B-201ENST00000364995 70 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 SNORA8.3-201ENST00000384679 139 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 AL591704.2-201ENST00000421658 181 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 SNRPGP14-201ENST00000435400 219 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.17□□□□□ -2.22
RTL3Q8N8U3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.17□□□□□ -2.22
RTL3Q8N8U3 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 RPL23AP91-201ENST00000569211 455 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 MIR4778-201ENST00000577635 80 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 MIR4781-201ENST00000585250 76 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 AC008507.4-201ENST00000585464 127 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 AL022345.2-201ENST00000606307 135 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 JPX_2.1-201ENST00000614161 69 ntBASIC1.17□□□□□ -2.22
RTL3Q8N8U3 MIR367-201ENST00000362299 68 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 RNU6-379P-201ENST00000363813 104 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.188-201ENST00000363952 111 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 RNU4-10P-201ENST00000364383 140 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 SNORA20.1-201ENST00000364790 130 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.293-201ENST00000364908 93 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
RTL3Q8N8U3 RNU6-131P-201ENST00000391144 107 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 MIR891A-201ENST00000401237 79 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 RNU6-321P-201ENST00000410912 106 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.16□□□□□ -2.22
RTL3Q8N8U3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.16□□□□□ -2.22
RTL3Q8N8U3 AC114811.1-201ENST00000507207 168 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 RNU6-322P-201ENST00000516010 103 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.679-201ENST00000516416 91 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 SNORA70.22-201ENST00000517160 124 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 AC009779.6-201ENST00000603972 165 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 AP000942.4-201ENST00000604811 241 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.16□□□□□ -2.22
RTL3Q8N8U3 RNY1P10-201ENST00000363268 113 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 snoU2_19.4-201ENST00000364329 80 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.229-201ENST00000364347 113 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 snoU2-30.1-201ENST00000365012 70 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 RNU6-1138P-201ENST00000365359 106 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 RNU6-53P-201ENST00000365367 106 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.489-201ENST00000384410 101 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.572-201ENST00000384757 98 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 RNU6-381P-201ENST00000391259 108 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 PIGPP3-201ENST00000425307 415 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 HMGN2P32-201ENST00000444648 269 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 AC245047.8-201ENST00000456455 284 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 AC005840.1-201ENST00000498412 377 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 TRMT112P2-201ENST00000512910 132 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 RNU7-12P-201ENST00000516030 62 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 SNORA31.4-201ENST00000516049 129 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 SNORD77.4-201ENST00000516158 81 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 SNORD45.4-201ENST00000516629 73 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.714-201ENST00000517065 90 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 RNU6-165P-201ENST00000517170 99 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.15□□□□□ -2.23
RTL3Q8N8U3 uc_338.4-201ENST00000616635 176 ntBASIC1.15□□□□□ -2.23
RTL3Q8N8U3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.262-201ENST00000364641 102 ntBASIC1.14□□□□□ -2.23
RTL3Q8N8U3 RNU6-163P-201ENST00000384396 106 ntBASIC1.14□□□□□ -2.23
RTL3Q8N8U3 MIR526A1-201ENST00000384897 85 ntBASIC1.14□□□□□ -2.23
RTL3Q8N8U3 AL451046.2-201ENST00000403074 277 ntBASIC1.14□□□□□ -2.23
RTL3Q8N8U3 Y_RNA.626-201ENST00000411288 95 ntBASIC1.14□□□□□ -2.23
RTL3Q8N8U3 RNU6-917P-201ENST00000516294 104 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms