Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SIX5Q8N196 AC096644.4-201ENST00000563417 2912 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-34-201ENST00000362441 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 RNU6-766P-201ENST00000362478 107 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-12-201ENST00000362583 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-29-201ENST00000362834 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-9-201ENST00000362912 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-21-201ENST00000362963 81 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-14-201ENST00000363090 81 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-13-201ENST00000363358 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-41-201ENST00000363608 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-11-201ENST00000363616 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-5-201ENST00000363633 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-39-201ENST00000363694 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-4-201ENST00000363810 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-16-201ENST00000363887 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-6-201ENST00000363942 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-42-201ENST00000364273 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-15-201ENST00000364809 81 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-1-201ENST00000364961 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-26-201ENST00000365067 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-10-201ENST00000365073 81 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORA4.2-201ENST00000365313 147 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-43-201ENST00000365503 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 Y_RNA.362-201ENST00000365518 110 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-36-201ENST00000365629 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 RNU1-109P-201ENST00000383960 147 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORA51.5-201ENST00000384126 131 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 RNU6-1113P-201ENST00000384348 107 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 MIR1283-2-201ENST00000408621 87 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.01□□□□□ -1.93
SIX5Q8N196 UBL5P3-201ENST00000475112 231 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 MIR3683-201ENST00000580847 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 MIR3163-201ENST00000581592 73 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 SNORD115-40-201ENST00000606510 82 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SIX5Q8N196 AP000648.3-201ENST00000623539 4507 ntBASIC3.01□□□□□ -1.93
SIX5Q8N196 AC093831.2-201ENST00000624393 3427 ntBASIC3□□□□□ -1.93
SIX5Q8N196 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SIX5Q8N196 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SIX5Q8N196 SNORA1.2-201ENST00000365189 134 ntBASIC3□□□□□ -1.93
SIX5Q8N196 RNU6-1014P-201ENST00000383940 103 ntBASIC3□□□□□ -1.93
SIX5Q8N196 RNU6-1031P-201ENST00000384773 107 ntBASIC3□□□□□ -1.93
SIX5Q8N196 MIR452-201ENST00000385020 85 ntBASIC3□□□□□ -1.93
SIX5Q8N196 RNVU1-2-201ENST00000516326 135 ntBASIC3□□□□□ -1.93
SIX5Q8N196 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SIX5Q8N196 AC073325.2-201ENST00000339545 159 ntBASIC2.99□□□□□ -1.93
SIX5Q8N196 RNA5SP270-201ENST00000411361 118 ntBASIC2.99□□□□□ -1.93
SIX5Q8N196 RNU7-181P-201ENST00000517234 74 ntBASIC2.99□□□□□ -1.93
SIX5Q8N196 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.99□□□□□ -1.93
SIX5Q8N196 AL590808.1-201ENST00000618696 141 ntBASIC2.99□□□□□ -1.93
SIX5Q8N196 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.99□□□□□ -1.93
SIX5Q8N196 MIR516B2-201ENST00000385190 85 ntBASIC2.98□□□□□ -1.93
SIX5Q8N196 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SIX5Q8N196 SNORA48.1-201ENST00000390879 135 ntBASIC2.98□□□□□ -1.93
SIX5Q8N196 HMGN2P39-201ENST00000398005 273 ntBASIC2.98□□□□□ -1.93
SIX5Q8N196 AL513328.1-201ENST00000446460 224 ntBASIC2.98□□□□□ -1.93
SIX5Q8N196 RN7SL75P-201ENST00000461926 281 ntBASIC2.98□□□□□ -1.93
SIX5Q8N196 RPL23AP63-201ENST00000498752 471 ntBASIC2.98□□□□□ -1.93
SIX5Q8N196 RNU6-998P-201ENST00000515894 101 ntBASIC2.98□□□□□ -1.93
SIX5Q8N196 RNU1-41P-201ENST00000516161 162 ntBASIC2.98□□□□□ -1.93
SIX5Q8N196 RNU1-48P-201ENST00000516400 162 ntBASIC2.98□□□□□ -1.93
SIX5Q8N196 RNA5SP281-201ENST00000516504 135 ntBASIC2.98□□□□□ -1.93
SIX5Q8N196 MIR4709-201ENST00000577272 72 ntBASIC2.98□□□□□ -1.93
SIX5Q8N196 ZNF861P-201ENST00000588126 639 ntBASIC2.98□□□□□ -1.93
SIX5Q8N196 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.98□□□□□ -1.93
SIX5Q8N196 MIR6733-201ENST00000635723 61 ntBASIC2.98□□□□□ -1.93
SIX5Q8N196 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SIX5Q8N196 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.97□□□□□ -1.93
SIX5Q8N196 Y_RNA.323-201ENST00000365157 109 ntBASIC2.97□□□□□ -1.93
SIX5Q8N196 SNORA9.2-201ENST00000365361 133 ntBASIC2.97□□□□□ -1.93
SIX5Q8N196 SNORA70.7-201ENST00000384159 133 ntBASIC2.97□□□□□ -1.93
SIX5Q8N196 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.97□□□□□ -1.93
SIX5Q8N196 RNA5SP481-201ENST00000516814 122 ntBASIC2.97□□□□□ -1.93
SIX5Q8N196 Y_RNA.328-201ENST00000365208 113 ntBASIC2.96□□□□□ -1.94
SIX5Q8N196 MIR548D2-201ENST00000384955 97 ntBASIC2.96□□□□□ -1.94
SIX5Q8N196 MIR136-201ENST00000385207 82 ntBASIC2.96□□□□□ -1.94
SIX5Q8N196 AL022718.1-201ENST00000412004 84 ntBASIC2.96□□□□□ -1.94
SIX5Q8N196 AC022523.2-201ENST00000561045 150 ntBASIC2.96□□□□□ -1.94
SIX5Q8N196 HSPE1P19-201ENST00000603327 295 ntBASIC2.96□□□□□ -1.94
SIX5Q8N196 AC007318.2-201ENST00000620999 243 ntBASIC2.96□□□□□ -1.94
SIX5Q8N196 AC073476.4-201ENST00000628409 72 ntBASIC2.96□□□□□ -1.94
SIX5Q8N196 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.96□□□□□ -1.94
SIX5Q8N196 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.96□□□□□ -1.94
SIX5Q8N196 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SIX5Q8N196 RNU6-859P-201ENST00000362728 107 ntBASIC2.95□□□□□ -1.94
SIX5Q8N196 MIR504-201ENST00000385065 83 ntBASIC2.95□□□□□ -1.94
SIX5Q8N196 RNY4P30-201ENST00000410216 95 ntBASIC2.95□□□□□ -1.94
SIX5Q8N196 RNU2-11P-201ENST00000459191 187 ntBASIC2.95□□□□□ -1.94
SIX5Q8N196 RNU2-35P-201ENST00000516446 142 ntBASIC2.95□□□□□ -1.94
SIX5Q8N196 MIR4524B-201ENST00000581569 115 ntBASIC2.95□□□□□ -1.94
SIX5Q8N196 MIR4769-201ENST00000584126 77 ntBASIC2.95□□□□□ -1.94
SIX5Q8N196 RNU6-94P-201ENST00000607728 107 ntBASIC2.95□□□□□ -1.94
SIX5Q8N196 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SIX5Q8N196 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SIX5Q8N196 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.94□□□□□ -1.94
SIX5Q8N196 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SIX5Q8N196 RNA5SP501-201ENST00000410990 112 ntBASIC2.94□□□□□ -1.94
SIX5Q8N196 snoU13.27-201ENST00000459278 104 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms