Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 ELOCP20-201ENST00000422460 345 ntBASIC0.7□□□□□ -2.3
SKA3Q8IX90 MTND4LP30-201ENST00000454092 297 ntBASIC0.7□□□□□ -2.3
SKA3Q8IX90 AC091959.1-201ENST00000495857 238 ntBASIC0.7□□□□□ -2.3
SKA3Q8IX90 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
SKA3Q8IX90 RNY3P15-201ENST00000516297 97 ntBASIC0.7□□□□□ -2.3
SKA3Q8IX90 RNU6-830P-201ENST00000516353 107 ntBASIC0.7□□□□□ -2.3
SKA3Q8IX90 RNU2-31P-201ENST00000516954 155 ntBASIC0.7□□□□□ -2.3
SKA3Q8IX90 RNU7-181P-201ENST00000517234 74 ntBASIC0.7□□□□□ -2.3
SKA3Q8IX90 AC109810.1-201ENST00000534066 224 ntBASIC0.7□□□□□ -2.3
SKA3Q8IX90 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.7□□□□□ -2.3
SKA3Q8IX90 MIR3171-201ENST00000584270 74 ntBASIC0.7□□□□□ -2.3
SKA3Q8IX90 AL512605.2-201ENST00000592972 256 ntBASIC0.7□□□□□ -2.3
SKA3Q8IX90 MIR367-201ENST00000362299 68 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 Y_RNA.26-201ENST00000362539 101 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 snoU2_19.2-201ENST00000363024 80 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 Y_RNA.242-201ENST00000364473 110 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 Y_RNA.276-201ENST00000364732 109 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 MIR215-201ENST00000384858 110 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 MIR520E-201ENST00000384867 87 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 U8.17-201ENST00000391292 132 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 RNU6-383P-201ENST00000410864 94 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 BTF3P11-201ENST00000426582 477 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 Y_RNA.637-201ENST00000459424 114 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 AC098869.1-201ENST00000481627 292 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 RNA5SP255-201ENST00000516370 107 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 RNU6-197P-201ENST00000516680 100 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 AC020661.2-201ENST00000560114 134 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 MIR4680-201ENST00000580906 66 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.69□□□□□ -2.3
SKA3Q8IX90 AC006441.5-201ENST00000612680 209 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 AC106800.4-201ENST00000614905 153 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 AC013791.1-201ENST00000616619 62 ntBASIC0.69□□□□□ -2.3
SKA3Q8IX90 AC068700.1-201ENST00000565862 3754 ntBASIC0.68□□□□□ -2.3
SKA3Q8IX90 Y_RNA.19-201ENST00000362462 99 ntBASIC0.68□□□□□ -2.3
SKA3Q8IX90 RNU6-797P-201ENST00000363101 109 ntBASIC0.68□□□□□ -2.3
SKA3Q8IX90 RNU6-770P-201ENST00000363929 105 ntBASIC0.68□□□□□ -2.3
SKA3Q8IX90 Y_RNA.214-201ENST00000364201 112 ntBASIC0.68□□□□□ -2.3
SKA3Q8IX90 RNU6-654P-201ENST00000364373 107 ntBASIC0.68□□□□□ -2.3
SKA3Q8IX90 Y_RNA.370-201ENST00000365589 108 ntBASIC0.68□□□□□ -2.3
SKA3Q8IX90 RNU6-144P-201ENST00000383951 107 ntBASIC0.68□□□□□ -2.3
SKA3Q8IX90 RNU6-662P-201ENST00000384253 104 ntBASIC0.68□□□□□ -2.3
SKA3Q8IX90 MIR1302-7-201ENST00000408841 72 ntBASIC0.68□□□□□ -2.3
SKA3Q8IX90 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.68□□□□□ -2.3
SKA3Q8IX90 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.68□□□□□ -2.3
SKA3Q8IX90 FABP5P4-201ENST00000437203 171 ntBASIC0.68□□□□□ -2.3
SKA3Q8IX90 RNU6-94P-201ENST00000607728 107 ntBASIC0.68□□□□□ -2.3
SKA3Q8IX90 AL021707.8-201ENST00000609428 183 ntBASIC0.68□□□□□ -2.3
SKA3Q8IX90 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.67□□□□□ -2.3
SKA3Q8IX90 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
SKA3Q8IX90 SNORA25.9-201ENST00000365087 128 ntBASIC0.67□□□□□ -2.3
SKA3Q8IX90 RNU6-326P-201ENST00000365480 107 ntBASIC0.67□□□□□ -2.3
SKA3Q8IX90 SNORA51.10-201ENST00000384418 136 ntBASIC0.67□□□□□ -2.3
SKA3Q8IX90 Y_RNA.604-201ENST00000410574 102 ntBASIC0.67□□□□□ -2.3
SKA3Q8IX90 AC005534.2-201ENST00000431047 433 ntBASIC0.67□□□□□ -2.3
SKA3Q8IX90 AC023449.1-201ENST00000454464 154 ntBASIC0.67□□□□□ -2.3
SKA3Q8IX90 RNU4-57P-201ENST00000515980 135 ntBASIC0.67□□□□□ -2.3
SKA3Q8IX90 RNU7-25P-201ENST00000516544 62 ntBASIC0.67□□□□□ -2.3
SKA3Q8IX90 RNU7-149P-201ENST00000516739 59 ntBASIC0.67□□□□□ -2.3
SKA3Q8IX90 AL049861.1-201ENST00000603130 150 ntBASIC0.67□□□□□ -2.3
SKA3Q8IX90 MIR6516-201ENST00000630554 81 ntBASIC0.67□□□□□ -2.3
SKA3Q8IX90 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
SKA3Q8IX90 Y_RNA.14-201ENST00000362415 103 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 Y_RNA.16-201ENST00000362421 102 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 Y_RNA.153-201ENST00000363615 91 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 Y_RNA.191-201ENST00000363972 113 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 Y_RNA.293-201ENST00000364908 93 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 MIR605-201ENST00000385078 83 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 MIR548O-201ENST00000408583 114 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 RNA5SP95-201ENST00000410319 137 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 RNU6-994P-201ENST00000410507 111 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 RNU2-64P-201ENST00000411315 191 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 AL392103.1-201ENST00000447000 198 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.66□□□□□ -2.3
SKA3Q8IX90 RNU11-2P-201ENST00000516898 142 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 AP003733.2-201ENST00000529409 171 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 MIR5692C2-201ENST00000577959 77 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 AC012433.1-201ENST00000588916 398 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 AL356055.1-201ENST00000602528 446 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 MIR4791-201ENST00000607666 84 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 AC022140.2-201ENST00000623500 188 ntBASIC0.66□□□□□ -2.3
SKA3Q8IX90 Y_RNA.64-201ENST00000362845 102 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 Y_RNA.152-201ENST00000363578 100 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 SNORA1.2-201ENST00000365189 134 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 RNU6-1335P-201ENST00000365426 107 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 RNU6-1067P-201ENST00000384752 107 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 MIR608-201ENST00000384820 100 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 AC004941.2-201ENST00000427009 228 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 MTND5P22-201ENST00000458380 195 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 RPS29P1-201ENST00000465274 159 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 AC036111.3-201ENST00000526389 112 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 MIR4724-201ENST00000579485 89 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 MIR4452-201ENST00000583004 71 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 AL008718.3-201ENST00000610217 321 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 AC108706.1-201ENST00000611053 297 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 uc_338.4-201ENST00000616635 176 ntBASIC0.65□□□□□ -2.31
SKA3Q8IX90 Y_RNA.217-201ENST00000364214 105 ntBASIC0.64□□□□□ -2.31
SKA3Q8IX90 SNORA2B-201ENST00000384583 137 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms