Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 Y_RNA.641-201ENST00000459414 105 ntBASIC1.07□□□□□ -2.24
CCDC60Q8IWA6 RNU6-1007P-201ENST00000516586 107 ntBASIC1.07□□□□□ -2.24
CCDC60Q8IWA6 SNORA74.3-201ENST00000517108 154 ntBASIC1.07□□□□□ -2.24
CCDC60Q8IWA6 RNA5SP404-201ENST00000517118 132 ntBASIC1.07□□□□□ -2.24
CCDC60Q8IWA6 MIR3973-201ENST00000579824 107 ntBASIC1.07□□□□□ -2.24
CCDC60Q8IWA6 MIR3192-201ENST00000584920 77 ntBASIC1.07□□□□□ -2.24
CCDC60Q8IWA6 AC008737.2-201ENST00000599446 118 ntBASIC1.07□□□□□ -2.24
CCDC60Q8IWA6 BX284668.6-201ENST00000606899 438 ntBASIC1.07□□□□□ -2.24
CCDC60Q8IWA6 RNU4-10P-201ENST00000364383 140 ntBASIC1.06□□□□□ -2.24
CCDC60Q8IWA6 Y_RNA.237-201ENST00000364439 102 ntBASIC1.06□□□□□ -2.24
CCDC60Q8IWA6 MIR532-201ENST00000385025 91 ntBASIC1.06□□□□□ -2.24
CCDC60Q8IWA6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.06□□□□□ -2.24
CCDC60Q8IWA6 AC023449.1-201ENST00000454464 154 ntBASIC1.06□□□□□ -2.24
CCDC60Q8IWA6 SNORD123-201ENST00000459473 70 ntBASIC1.06□□□□□ -2.24
CCDC60Q8IWA6 RPS29P1-201ENST00000465274 159 ntBASIC1.06□□□□□ -2.24
CCDC60Q8IWA6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC60Q8IWA6 MIR4724-201ENST00000579485 89 ntBASIC1.06□□□□□ -2.24
CCDC60Q8IWA6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CCDC60Q8IWA6 AP001282.2-201ENST00000616149 309 ntBASIC1.06□□□□□ -2.24
CCDC60Q8IWA6 AC015726.2-201ENST00000620112 122 ntBASIC1.06□□□□□ -2.24
CCDC60Q8IWA6 Y_RNA.117-201ENST00000363294 101 ntBASIC1.05□□□□□ -2.24
CCDC60Q8IWA6 SNORA63C-201ENST00000364578 129 ntBASIC1.05□□□□□ -2.24
CCDC60Q8IWA6 Y_RNA.461-201ENST00000384263 103 ntBASIC1.05□□□□□ -2.24
CCDC60Q8IWA6 RNU6-1289P-201ENST00000384431 106 ntBASIC1.05□□□□□ -2.24
CCDC60Q8IWA6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CCDC60Q8IWA6 AL603910.2-201ENST00000407268 136 ntBASIC1.05□□□□□ -2.24
CCDC60Q8IWA6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.05□□□□□ -2.24
CCDC60Q8IWA6 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
CCDC60Q8IWA6 RNU7-41P-201ENST00000515917 61 ntBASIC1.05□□□□□ -2.24
CCDC60Q8IWA6 MIR4764-201ENST00000580680 88 ntBASIC1.05□□□□□ -2.24
CCDC60Q8IWA6 AL049861.1-201ENST00000603130 150 ntBASIC1.05□□□□□ -2.24
CCDC60Q8IWA6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC60Q8IWA6 Y_RNA.44-201ENST00000362676 108 ntBASIC1.04□□□□□ -2.24
CCDC60Q8IWA6 RNU6-268P-201ENST00000364174 107 ntBASIC1.04□□□□□ -2.24
CCDC60Q8IWA6 SNORA70.7-201ENST00000384159 133 ntBASIC1.04□□□□□ -2.24
CCDC60Q8IWA6 Y_RNA.459-201ENST00000384251 102 ntBASIC1.04□□□□□ -2.24
CCDC60Q8IWA6 Y_RNA.574-201ENST00000384766 95 ntBASIC1.04□□□□□ -2.24
CCDC60Q8IWA6 MIR1302-6-201ENST00000408466 90 ntBASIC1.04□□□□□ -2.24
CCDC60Q8IWA6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC60Q8IWA6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC60Q8IWA6 AC006006.1-201ENST00000603082 144 ntBASIC1.04□□□□□ -2.24
CCDC60Q8IWA6 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
CCDC60Q8IWA6 AC027335.2-201ENST00000624030 375 ntBASIC1.04□□□□□ -2.24
CCDC60Q8IWA6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC60Q8IWA6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC60Q8IWA6 UBE2WP1-201ENST00000362030 340 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 SNORA25.3-201ENST00000363205 127 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 Y_RNA.145-201ENST00000363527 102 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 Y_RNA.275-201ENST00000364726 110 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 Y_RNA.363-201ENST00000365529 113 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 RNU6-211P-201ENST00000384047 107 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 Y_RNA.483-201ENST00000384380 101 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 SNRPGP14-201ENST00000435400 219 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 AC245047.8-201ENST00000456455 284 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 snoU13.25-201ENST00000458945 104 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 RNU7-43P-201ENST00000516554 64 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 SNORA4-201ENST00000584302 138 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 Pinc.1-201ENST00000616452 154 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 MIR8062-201ENST00000621515 85 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 U6.104-201ENST00000637979 90 ntBASIC1.03□□□□□ -2.24
CCDC60Q8IWA6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 Y_RNA.176-201ENST00000363815 109 ntBASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 RNU6-740P-201ENST00000364734 105 ntBASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 Y_RNA.355-201ENST00000365462 98 ntBASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 MIR518E-201ENST00000385252 88 ntBASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 MT-TW-201ENST00000387382 68 ntBASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 SNORD28B-201ENST00000390993 75 ntBASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 MIR548F4-201ENST00000408515 105 ntBASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 RN7SKP164-201ENST00000516138 266 ntBASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 RNU7-149P-201ENST00000516739 59 ntBASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 AL391903.3-201ENST00000612158 163 ntBASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 Y_RNA.802-201ENST00000614892 130 ntBASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 U2.14-201ENST00000615943 113 ntBASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 uc_338.4-201ENST00000616635 176 ntBASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.02□□□□□ -2.25
CCDC60Q8IWA6 Y_RNA.242-201ENST00000364473 110 ntBASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 Y_RNA.508-201ENST00000384502 114 ntBASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 RNA5SP496-201ENST00000391240 109 ntBASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 SNORD79.1-201ENST00000516069 84 ntBASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 RNU7-181P-201ENST00000517234 74 ntBASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 MIR4698-201ENST00000577795 80 ntBASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 MIR548AR-201ENST00000582191 57 ntBASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 AL360085.1-201ENST00000604713 532 ntBASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 AL021707.8-201ENST00000609428 183 ntBASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 MIR6857-201ENST00000613267 93 ntBASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC60Q8IWA6 MIR103A2-201ENST00000362154 78 ntBASIC1□□□□□ -2.25
CCDC60Q8IWA6 Y_RNA.24-201ENST00000362508 103 ntBASIC1□□□□□ -2.25
CCDC60Q8IWA6 SNORA80D-201ENST00000384488 135 ntBASIC1□□□□□ -2.25
CCDC60Q8IWA6 RNU6-738P-201ENST00000384531 106 ntBASIC1□□□□□ -2.25
CCDC60Q8IWA6 Y_RNA.572-201ENST00000384757 98 ntBASIC1□□□□□ -2.25
CCDC60Q8IWA6 MIR570-201ENST00000384917 97 ntBASIC1□□□□□ -2.25
CCDC60Q8IWA6 SNORA75.2-201ENST00000391138 150 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms