Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RNU6-437P-201ENST00000459408 95 ntBASIC1.17□□□□□ -2.22
NPHP3Q7Z494 AC091959.1-201ENST00000495857 238 ntBASIC1.17□□□□□ -2.22
NPHP3Q7Z494 RNU6-947P-201ENST00000516264 106 ntBASIC1.17□□□□□ -2.22
NPHP3Q7Z494 RNU6-635P-201ENST00000516651 102 ntBASIC1.17□□□□□ -2.22
NPHP3Q7Z494 Y_RNA.720-201ENST00000517166 92 ntBASIC1.17□□□□□ -2.22
NPHP3Q7Z494 GHRLOS.1-201ENST00000610995 70 ntBASIC1.17□□□□□ -2.22
NPHP3Q7Z494 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
NPHP3Q7Z494 SNORA25.1-201ENST00000362326 128 ntBASIC1.16□□□□□ -2.22
NPHP3Q7Z494 AL451046.2-201ENST00000403074 277 ntBASIC1.16□□□□□ -2.22
NPHP3Q7Z494 RNU6-1203P-201ENST00000410703 110 ntBASIC1.16□□□□□ -2.22
NPHP3Q7Z494 NDUFA4P2-201ENST00000489989 244 ntBASIC1.16□□□□□ -2.22
NPHP3Q7Z494 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.16□□□□□ -2.22
NPHP3Q7Z494 RNU6-1338P-201ENST00000516328 91 ntBASIC1.16□□□□□ -2.22
NPHP3Q7Z494 DEFB108E-201ENST00000524692 240 ntBASIC1.16□□□□□ -2.22
NPHP3Q7Z494 Y_RNA.376-201ENST00000365638 108 ntBASIC1.15□□□□□ -2.22
NPHP3Q7Z494 SNORA25-201ENST00000384384 134 ntBASIC1.15□□□□□ -2.22
NPHP3Q7Z494 MRPL35P3-201ENST00000421557 364 ntBASIC1.15□□□□□ -2.22
NPHP3Q7Z494 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.15□□□□□ -2.22
NPHP3Q7Z494 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.15□□□□□ -2.22
NPHP3Q7Z494 RPL23AP91-201ENST00000569211 455 ntBASIC1.15□□□□□ -2.22
NPHP3Q7Z494 AC008737.2-201ENST00000599446 118 ntBASIC1.15□□□□□ -2.22
NPHP3Q7Z494 AC037487.3-201ENST00000606668 112 ntBASIC1.15□□□□□ -2.22
NPHP3Q7Z494 BX284668.6-201ENST00000606899 438 ntBASIC1.15□□□□□ -2.22
NPHP3Q7Z494 JPX_2.1-201ENST00000614161 69 ntBASIC1.15□□□□□ -2.22
NPHP3Q7Z494 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.15□□□□□ -2.22
NPHP3Q7Z494 RNU6-899P-201ENST00000363947 107 ntBASIC1.15□□□□□ -2.23
NPHP3Q7Z494 snoU2-30.1-201ENST00000365012 70 ntBASIC1.15□□□□□ -2.23
NPHP3Q7Z494 RNU6-969P-201ENST00000383900 105 ntBASIC1.15□□□□□ -2.23
NPHP3Q7Z494 RNU6-514P-201ENST00000384208 107 ntBASIC1.15□□□□□ -2.23
NPHP3Q7Z494 MIR936-201ENST00000401264 98 ntBASIC1.15□□□□□ -2.23
NPHP3Q7Z494 RNU6-383P-201ENST00000410864 94 ntBASIC1.15□□□□□ -2.23
NPHP3Q7Z494 BTF3P11-201ENST00000426582 477 ntBASIC1.15□□□□□ -2.23
NPHP3Q7Z494 SERF1AP1-201ENST00000514575 187 ntBASIC1.15□□□□□ -2.23
NPHP3Q7Z494 RNU6-322P-201ENST00000516010 103 ntBASIC1.15□□□□□ -2.23
NPHP3Q7Z494 SNORA27.4-201ENST00000516650 95 ntBASIC1.15□□□□□ -2.23
NPHP3Q7Z494 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
NPHP3Q7Z494 AC090142.3-201ENST00000519012 385 ntBASIC1.15□□□□□ -2.23
NPHP3Q7Z494 AL022345.2-201ENST00000606307 135 ntBASIC1.15□□□□□ -2.23
NPHP3Q7Z494 AC013791.1-201ENST00000616619 62 ntBASIC1.15□□□□□ -2.23
NPHP3Q7Z494 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
NPHP3Q7Z494 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.14□□□□□ -2.23
NPHP3Q7Z494 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.14□□□□□ -2.23
NPHP3Q7Z494 RNU6-1272P-201ENST00000362776 107 ntBASIC1.14□□□□□ -2.23
NPHP3Q7Z494 RNU6-674P-201ENST00000363831 107 ntBASIC1.14□□□□□ -2.23
NPHP3Q7Z494 Y_RNA.336-201ENST00000365307 109 ntBASIC1.14□□□□□ -2.23
NPHP3Q7Z494 AC133485.1-201ENST00000567176 124 ntBASIC1.14□□□□□ -2.23
NPHP3Q7Z494 AC138907.6-201ENST00000568401 126 ntBASIC1.14□□□□□ -2.23
NPHP3Q7Z494 AP001282.2-201ENST00000616149 309 ntBASIC1.14□□□□□ -2.23
NPHP3Q7Z494 snoU18.1-201ENST00000629629 71 ntBASIC1.14□□□□□ -2.23
NPHP3Q7Z494 SNORD114-23-201ENST00000363536 72 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 RNU6-1205P-201ENST00000363625 106 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 Y_RNA.217-201ENST00000364214 105 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 RNU4-10P-201ENST00000364383 140 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 Y_RNA.237-201ENST00000364439 102 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 RNU6-713P-201ENST00000384761 107 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 MIR452-201ENST00000385020 85 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 MT-TW-201ENST00000387382 68 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
NPHP3Q7Z494 Y_RNA.641-201ENST00000459414 105 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 TRBVB-201ENST00000477100 408 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 AC048334.1-201ENST00000477975 159 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 Y_RNA.714-201ENST00000517065 90 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 AL442663.2-201ENST00000554385 511 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 MIR5692C2-201ENST00000577959 77 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 AL008718.3-201ENST00000610217 321 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 AC010487.4-201ENST00000637027 61 ntBASIC1.13□□□□□ -2.23
NPHP3Q7Z494 Y_RNA.115-201ENST00000363272 98 ntBASIC1.12□□□□□ -2.23
NPHP3Q7Z494 Y_RNA.117-201ENST00000363294 101 ntBASIC1.12□□□□□ -2.23
NPHP3Q7Z494 SNORA22-201ENST00000383907 134 ntBASIC1.12□□□□□ -2.23
NPHP3Q7Z494 RNU6-738P-201ENST00000384531 106 ntBASIC1.12□□□□□ -2.23
NPHP3Q7Z494 SNORA22C-201ENST00000384614 134 ntBASIC1.12□□□□□ -2.23
NPHP3Q7Z494 SNORD72-201ENST00000390994 80 ntBASIC1.12□□□□□ -2.23
NPHP3Q7Z494 MIR548F4-201ENST00000408515 105 ntBASIC1.12□□□□□ -2.23
NPHP3Q7Z494 SNORD11-201ENST00000459124 84 ntBASIC1.12□□□□□ -2.23
NPHP3Q7Z494 SNORA31.2-201ENST00000516019 134 ntBASIC1.12□□□□□ -2.23
NPHP3Q7Z494 MIR2681-201ENST00000581814 105 ntBASIC1.12□□□□□ -2.23
NPHP3Q7Z494 AL096861.1-201ENST00000610899 123 ntBASIC1.12□□□□□ -2.23
NPHP3Q7Z494 AC027335.2-201ENST00000624030 375 ntBASIC1.12□□□□□ -2.23
NPHP3Q7Z494 Y_RNA.145-201ENST00000363527 102 ntBASIC1.11□□□□□ -2.23
NPHP3Q7Z494 SNORD14E-201ENST00000364009 85 ntBASIC1.11□□□□□ -2.23
NPHP3Q7Z494 Y_RNA.293-201ENST00000364908 93 ntBASIC1.11□□□□□ -2.23
NPHP3Q7Z494 Y_RNA.483-201ENST00000384380 101 ntBASIC1.11□□□□□ -2.23
NPHP3Q7Z494 MIR136-201ENST00000385207 82 ntBASIC1.11□□□□□ -2.23
NPHP3Q7Z494 RNU6-651P-201ENST00000411040 105 ntBASIC1.11□□□□□ -2.23
NPHP3Q7Z494 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.11□□□□□ -2.23
NPHP3Q7Z494 MTND4LP30-201ENST00000454092 297 ntBASIC1.11□□□□□ -2.23
NPHP3Q7Z494 snoU13.25-201ENST00000458945 104 ntBASIC1.11□□□□□ -2.23
NPHP3Q7Z494 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
NPHP3Q7Z494 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.11□□□□□ -2.23
NPHP3Q7Z494 SNORA18.7-201ENST00000516910 131 ntBASIC1.11□□□□□ -2.23
NPHP3Q7Z494 SNORA70.22-201ENST00000517160 124 ntBASIC1.11□□□□□ -2.23
NPHP3Q7Z494 AL360085.1-201ENST00000604713 532 ntBASIC1.11□□□□□ -2.23
NPHP3Q7Z494 MIR8062-201ENST00000621515 85 ntBASIC1.11□□□□□ -2.23
NPHP3Q7Z494 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
NPHP3Q7Z494 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
NPHP3Q7Z494 UBE2WP1-201ENST00000362030 340 ntBASIC1.1□□□□□ -2.23
NPHP3Q7Z494 Y_RNA.251-201ENST00000364551 99 ntBASIC1.1□□□□□ -2.23
NPHP3Q7Z494 RNU6-144P-201ENST00000383951 107 ntBASIC1.1□□□□□ -2.23
NPHP3Q7Z494 SNORA70.7-201ENST00000384159 133 ntBASIC1.1□□□□□ -2.23
NPHP3Q7Z494 Y_RNA.459-201ENST00000384251 102 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms