Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.75□□□□□ -2.29
LRIT3Q3SXY7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
LRIT3Q3SXY7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
LRIT3Q3SXY7 MIR1185-1-201ENST00000408598 86 ntBASIC0.75□□□□□ -2.29
LRIT3Q3SXY7 RNU6-437P-201ENST00000459408 95 ntBASIC0.75□□□□□ -2.29
LRIT3Q3SXY7 RNA5SP255-201ENST00000516370 107 ntBASIC0.75□□□□□ -2.29
LRIT3Q3SXY7 AC023827.1-201ENST00000569247 97 ntBASIC0.75□□□□□ -2.29
LRIT3Q3SXY7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LRIT3Q3SXY7 MIR1302-11-201ENST00000408051 138 ntBASIC0.74□□□□□ -2.29
LRIT3Q3SXY7 MIR1302-9-201ENST00000408365 138 ntBASIC0.74□□□□□ -2.29
LRIT3Q3SXY7 MIR1302-10-201ENST00000408734 138 ntBASIC0.74□□□□□ -2.29
LRIT3Q3SXY7 SNORA36B-201ENST00000410438 131 ntBASIC0.74□□□□□ -2.29
LRIT3Q3SXY7 AC067940.1-201ENST00000458411 300 ntBASIC0.74□□□□□ -2.29
LRIT3Q3SXY7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.74□□□□□ -2.29
LRIT3Q3SXY7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.74□□□□□ -2.29
LRIT3Q3SXY7 AC109810.1-201ENST00000534066 224 ntBASIC0.74□□□□□ -2.29
LRIT3Q3SXY7 AC131055.1-201ENST00000584626 316 ntBASIC0.74□□□□□ -2.29
LRIT3Q3SXY7 MIR1302-2-201ENST00000607096 138 ntBASIC0.74□□□□□ -2.29
LRIT3Q3SXY7 Pinc.1-201ENST00000616452 154 ntBASIC0.74□□□□□ -2.29
LRIT3Q3SXY7 MIR4251-201ENST00000635819 61 ntBASIC0.74□□□□□ -2.29
LRIT3Q3SXY7 AC134026.1-201ENST00000623249 2239 ntBASIC0.73□□□□□ -2.29
LRIT3Q3SXY7 Y_RNA.370-201ENST00000365589 108 ntBASIC0.73□□□□□ -2.29
LRIT3Q3SXY7 RNU7-141P-201ENST00000459304 62 ntBASIC0.73□□□□□ -2.29
LRIT3Q3SXY7 RN7SKP164-201ENST00000516138 266 ntBASIC0.73□□□□□ -2.29
LRIT3Q3SXY7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LRIT3Q3SXY7 AC104695.3-201ENST00000604052 296 ntBASIC0.73□□□□□ -2.29
LRIT3Q3SXY7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.73□□□□□ -2.29
LRIT3Q3SXY7 RNU4-80P-201ENST00000363200 141 ntBASIC0.72□□□□□ -2.29
LRIT3Q3SXY7 Y_RNA.431-201ENST00000384086 102 ntBASIC0.72□□□□□ -2.29
LRIT3Q3SXY7 Y_RNA.518-201ENST00000384552 113 ntBASIC0.72□□□□□ -2.29
LRIT3Q3SXY7 MIR1265-201ENST00000408444 86 ntBASIC0.72□□□□□ -2.29
LRIT3Q3SXY7 AC022028.1-201ENST00000412054 408 ntBASIC0.72□□□□□ -2.29
LRIT3Q3SXY7 RPL23AP91-201ENST00000569211 455 ntBASIC0.72□□□□□ -2.29
LRIT3Q3SXY7 MIR548AR-201ENST00000582191 57 ntBASIC0.72□□□□□ -2.29
LRIT3Q3SXY7 AL133255.1-201ENST00000606374 441 ntBASIC0.72□□□□□ -2.29
LRIT3Q3SXY7 AC007485.1-201ENST00000616755 206 ntBASIC0.72□□□□□ -2.29
LRIT3Q3SXY7 RNU6-674P-201ENST00000363831 107 ntBASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 SNORA63.7-201ENST00000365579 123 ntBASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 SNORA72.4-201ENST00000384174 132 ntBASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 RNY3P14-201ENST00000384309 102 ntBASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 RNA5SP63-201ENST00000391225 112 ntBASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 SNORD111-201ENST00000408139 94 ntBASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 RNU6-994P-201ENST00000410507 111 ntBASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 AC023449.1-201ENST00000454464 154 ntBASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 U7.7-201ENST00000459276 60 ntBASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 NDUFA4P2-201ENST00000489989 244 ntBASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 RNU6-830P-201ENST00000516353 107 ntBASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 AC008507.4-201ENST00000585464 127 ntBASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 AL136317.1-201ENST00000612653 226 ntBASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 MIR5087-201ENST00000635826 76 ntBASIC0.71□□□□□ -2.3
LRIT3Q3SXY7 RNU6-268P-201ENST00000364174 107 ntBASIC0.7□□□□□ -2.3
LRIT3Q3SXY7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.7□□□□□ -2.3
LRIT3Q3SXY7 SNORA62.5-201ENST00000516634 120 ntBASIC0.7□□□□□ -2.3
LRIT3Q3SXY7 AC025627.3-201ENST00000582078 182 ntBASIC0.7□□□□□ -2.3
LRIT3Q3SXY7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.7□□□□□ -2.3
LRIT3Q3SXY7 PART1_1.1-201ENST00000611761 217 ntBASIC0.7□□□□□ -2.3
LRIT3Q3SXY7 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
LRIT3Q3SXY7 MIR376A1-201ENST00000616574 68 ntBASIC0.7□□□□□ -2.3
LRIT3Q3SXY7 uc_338.22-201ENST00000622722 187 ntBASIC0.7□□□□□ -2.3
LRIT3Q3SXY7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
LRIT3Q3SXY7 SNORD113-8-201ENST00000363497 74 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 RNU6-899P-201ENST00000363947 107 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 RNA5SP499-201ENST00000363982 119 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 RNU6-1048P-201ENST00000364054 107 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 Y_RNA.286-201ENST00000364813 102 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 SNORA1.2-201ENST00000365189 134 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 SNORD89-201ENST00000390981 114 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 SNORD28B-201ENST00000390993 75 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 U8.17-201ENST00000391292 132 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 RNU6-130P-201ENST00000411112 103 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 SCARNA8-201ENST00000515924 131 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 AC005357.1-201ENST00000588399 301 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 AC124312.5-201ENST00000604451 268 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 AL353765.1-201ENST00000605514 183 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 AC015726.2-201ENST00000620112 122 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 AC090971.5-201ENST00000621102 293 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 AC090574.1-201ENST00000623186 233 ntBASIC0.69□□□□□ -2.3
LRIT3Q3SXY7 RNU6-801P-201ENST00000364087 105 ntBASIC0.68□□□□□ -2.3
LRIT3Q3SXY7 SNORD113.3-201ENST00000364630 78 ntBASIC0.68□□□□□ -2.3
LRIT3Q3SXY7 MIR605-201ENST00000385078 83 ntBASIC0.68□□□□□ -2.3
LRIT3Q3SXY7 MTCO2P33-201ENST00000402100 465 ntBASIC0.68□□□□□ -2.3
LRIT3Q3SXY7 MIR1278-201ENST00000408753 81 ntBASIC0.68□□□□□ -2.3
LRIT3Q3SXY7 RNU2-14P-201ENST00000411053 191 ntBASIC0.68□□□□□ -2.3
LRIT3Q3SXY7 SNRPGP14-201ENST00000435400 219 ntBASIC0.68□□□□□ -2.3
LRIT3Q3SXY7 AL392103.1-201ENST00000447000 198 ntBASIC0.68□□□□□ -2.3
LRIT3Q3SXY7 AC010655.3-201ENST00000478818 450 ntBASIC0.68□□□□□ -2.3
LRIT3Q3SXY7 RNU6-1046P-201ENST00000516538 107 ntBASIC0.68□□□□□ -2.3
LRIT3Q3SXY7 MIR2115-201ENST00000516657 100 ntBASIC0.68□□□□□ -2.3
LRIT3Q3SXY7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.68□□□□□ -2.3
LRIT3Q3SXY7 AC104465.1-201ENST00000611365 139 ntBASIC0.68□□□□□ -2.3
LRIT3Q3SXY7 7SK.10-201ENST00000621414 298 ntBASIC0.68□□□□□ -2.3
LRIT3Q3SXY7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
LRIT3Q3SXY7 MIR369-201ENST00000362155 70 ntBASIC0.67□□□□□ -2.3
LRIT3Q3SXY7 RNU4-90P-201ENST00000362773 141 ntBASIC0.67□□□□□ -2.3
LRIT3Q3SXY7 Y_RNA.395-201ENST00000383945 109 ntBASIC0.67□□□□□ -2.3
LRIT3Q3SXY7 Y_RNA.445-201ENST00000384168 102 ntBASIC0.67□□□□□ -2.3
LRIT3Q3SXY7 SNORA51.10-201ENST00000384418 136 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms