Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL022345.2-201ENST00000606307 135 ntBASIC1.17□□□□□ -2.22
CDK3Q00526 uc_338.4-201ENST00000616635 176 ntBASIC1.17□□□□□ -2.22
CDK3Q00526 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
CDK3Q00526 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.16□□□□□ -2.22
CDK3Q00526 SNORA25-201ENST00000384384 134 ntBASIC1.16□□□□□ -2.22
CDK3Q00526 MIR222-201ENST00000384992 110 ntBASIC1.16□□□□□ -2.22
CDK3Q00526 MIR526A2-201ENST00000390198 65 ntBASIC1.16□□□□□ -2.22
CDK3Q00526 RNU6-910P-201ENST00000390844 107 ntBASIC1.16□□□□□ -2.22
CDK3Q00526 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.16□□□□□ -2.22
CDK3Q00526 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.16□□□□□ -2.22
CDK3Q00526 AC090821.2-201ENST00000523552 176 ntBASIC1.16□□□□□ -2.22
CDK3Q00526 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.16□□□□□ -2.22
CDK3Q00526 MIR3192-201ENST00000584920 77 ntBASIC1.16□□□□□ -2.22
CDK3Q00526 AL021707.8-201ENST00000609428 183 ntBASIC1.16□□□□□ -2.22
CDK3Q00526 Y_RNA.24-201ENST00000362508 103 ntBASIC1.15□□□□□ -2.23
CDK3Q00526 SNORA8.3-201ENST00000384679 139 ntBASIC1.15□□□□□ -2.23
CDK3Q00526 Y_RNA.590-201ENST00000410140 107 ntBASIC1.15□□□□□ -2.23
CDK3Q00526 RNU6-651P-201ENST00000411040 105 ntBASIC1.15□□□□□ -2.23
CDK3Q00526 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.15□□□□□ -2.23
CDK3Q00526 RNU6-1045P-201ENST00000516321 107 ntBASIC1.15□□□□□ -2.23
CDK3Q00526 Y_RNA.679-201ENST00000516416 91 ntBASIC1.15□□□□□ -2.23
CDK3Q00526 RNU7-43P-201ENST00000516554 64 ntBASIC1.15□□□□□ -2.23
CDK3Q00526 RNU7-149P-201ENST00000516739 59 ntBASIC1.15□□□□□ -2.23
CDK3Q00526 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.15□□□□□ -2.23
CDK3Q00526 MIR4764-201ENST00000580680 88 ntBASIC1.15□□□□□ -2.23
CDK3Q00526 BX284668.6-201ENST00000606899 438 ntBASIC1.15□□□□□ -2.23
CDK3Q00526 Pinc.1-201ENST00000616452 154 ntBASIC1.15□□□□□ -2.23
CDK3Q00526 MIR8070-201ENST00000616510 88 ntBASIC1.15□□□□□ -2.23
CDK3Q00526 AC015726.2-201ENST00000620112 122 ntBASIC1.15□□□□□ -2.23
CDK3Q00526 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
CDK3Q00526 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CDK3Q00526 AC245047.8-201ENST00000456455 284 ntBASIC1.14□□□□□ -2.23
CDK3Q00526 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.14□□□□□ -2.23
CDK3Q00526 MTCO2P24-201ENST00000515611 426 ntBASIC1.14□□□□□ -2.23
CDK3Q00526 RN7SKP164-201ENST00000516138 266 ntBASIC1.14□□□□□ -2.23
CDK3Q00526 RNU7-40P-201ENST00000516397 64 ntBASIC1.14□□□□□ -2.23
CDK3Q00526 AC012433.1-201ENST00000588916 398 ntBASIC1.14□□□□□ -2.23
CDK3Q00526 AC006441.5-201ENST00000612680 209 ntBASIC1.14□□□□□ -2.23
CDK3Q00526 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CDK3Q00526 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
CDK3Q00526 AL442644.1-201ENST00000454390 3105 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 Y_RNA.82-201ENST00000363000 102 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 Y_RNA.92-201ENST00000363043 102 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 Y_RNA.235-201ENST00000364412 102 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 Y_RNA.306-201ENST00000365015 102 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 Y_RNA.312-201ENST00000365089 102 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 Y_RNA.322-201ENST00000365151 102 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 Y_RNA.518-201ENST00000384552 113 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 Y_RNA.572-201ENST00000384757 98 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 Y_RNA.587-201ENST00000391210 103 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 SNORD2.1-201ENST00000458762 69 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 snoU13.25-201ENST00000458945 104 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 Y_RNA.650-201ENST00000459002 102 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 RNU7-41P-201ENST00000515917 61 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 RNU6-830P-201ENST00000516353 107 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 Y_RNA.777-201ENST00000516982 102 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 Y_RNA.771-201ENST00000598668 102 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 Y_RNA.789-201ENST00000622480 102 ntBASIC1.13□□□□□ -2.23
CDK3Q00526 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
CDK3Q00526 Y_RNA.54-201ENST00000362766 105 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 Y_RNA.133-201ENST00000363428 110 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 Y_RNA.288-201ENST00000364854 92 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 Y_RNA.363-201ENST00000365529 113 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 MIR626-201ENST00000385032 94 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 MIR150-201ENST00000385048 84 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CDK3Q00526 SNORD28B-201ENST00000390993 75 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 RNU2-38P-201ENST00000410856 79 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 MTCYBP9-201ENST00000431021 303 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 COX6CP14-201ENST00000469580 174 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 AC100767.1-201ENST00000528178 123 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 MIR5688-201ENST00000580619 83 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 MIR548AR-201ENST00000582191 57 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 AL391903.3-201ENST00000612158 163 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 AC027335.2-201ENST00000624030 375 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 AC099654.10-201ENST00000640395 161 ntBASIC1.12□□□□□ -2.23
CDK3Q00526 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CDK3Q00526 Y_RNA.229-201ENST00000364347 113 ntBASIC1.11□□□□□ -2.23
CDK3Q00526 Y_RNA.238-201ENST00000364441 102 ntBASIC1.11□□□□□ -2.23
CDK3Q00526 RNU6-1138P-201ENST00000365359 106 ntBASIC1.11□□□□□ -2.23
CDK3Q00526 Y_RNA.352-201ENST00000365439 102 ntBASIC1.11□□□□□ -2.23
CDK3Q00526 U8.17-201ENST00000391292 132 ntBASIC1.11□□□□□ -2.23
CDK3Q00526 MIR1302-3-201ENST00000408128 138 ntBASIC1.11□□□□□ -2.23
CDK3Q00526 SNORD77.4-201ENST00000516158 81 ntBASIC1.11□□□□□ -2.23
CDK3Q00526 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.11□□□□□ -2.23
CDK3Q00526 SNORA25.3-201ENST00000363205 127 ntBASIC1.1□□□□□ -2.23
CDK3Q00526 Y_RNA.122-201ENST00000363331 96 ntBASIC1.1□□□□□ -2.23
CDK3Q00526 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
CDK3Q00526 MIR548O-201ENST00000408583 114 ntBASIC1.1□□□□□ -2.23
CDK3Q00526 AL591704.2-201ENST00000421658 181 ntBASIC1.1□□□□□ -2.23
CDK3Q00526 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.1□□□□□ -2.23
CDK3Q00526 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.1□□□□□ -2.23
CDK3Q00526 SNORD127-201ENST00000458892 86 ntBASIC1.1□□□□□ -2.23
CDK3Q00526 SNORD79.1-201ENST00000516069 84 ntBASIC1.1□□□□□ -2.23
CDK3Q00526 RNA5SP102-201ENST00000516865 106 ntBASIC1.1□□□□□ -2.23
CDK3Q00526 RNU7-181P-201ENST00000517234 74 ntBASIC1.1□□□□□ -2.23
CDK3Q00526 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms