Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RNU6-1115P-201ENST00000362490 106 ntBASIC0.37□□□□□ -2.35
CCNA1P78396 RNU6-937P-201ENST00000384325 106 ntBASIC0.37□□□□□ -2.35
CCNA1P78396 RNU6-437P-201ENST00000459408 95 ntBASIC0.37□□□□□ -2.35
CCNA1P78396 Y_RNA.661-201ENST00000516003 99 ntBASIC0.37□□□□□ -2.35
CCNA1P78396 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.37□□□□□ -2.35
CCNA1P78396 RPL23AP91-201ENST00000569211 455 ntBASIC0.37□□□□□ -2.35
CCNA1P78396 AL080274.1-201ENST00000605565 220 ntBASIC0.37□□□□□ -2.35
CCNA1P78396 AC010205.1-201ENST00000616668 449 ntBASIC0.37□□□□□ -2.35
CCNA1P78396 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.37□□□□□ -2.35
CCNA1P78396 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 RNU6-369P-201ENST00000362515 102 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 RNU4-80P-201ENST00000363200 141 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 Y_RNA.142-201ENST00000363491 102 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 RNU6-396P-201ENST00000365369 105 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 Y_RNA.384-201ENST00000383909 102 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 Y_RNA.458-201ENST00000384240 102 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 Y_RNA.462-201ENST00000384268 102 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 Y_RNA.505-201ENST00000384489 102 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 RNU6-21P-201ENST00000384710 107 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 RNU6-205P-201ENST00000390858 107 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 AL603910.2-201ENST00000407268 136 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 RNU2-14P-201ENST00000411053 191 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 AC015818.7-201ENST00000428754 109 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 AC087499.7-201ENST00000441958 109 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 RNU7-141P-201ENST00000459304 62 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 AC010655.3-201ENST00000478818 450 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 AC005357.1-201ENST00000588399 301 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 AC092447.9-201ENST00000603395 144 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 MIR4791-201ENST00000607666 84 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 MTND1P7-201ENST00000632801 297 ntBASIC0.36□□□□□ -2.35
CCNA1P78396 SNORD45.3-201ENST00000363836 72 ntBASIC0.35□□□□□ -2.35
CCNA1P78396 Y_RNA.390-201ENST00000383932 102 ntBASIC0.35□□□□□ -2.35
CCNA1P78396 Y_RNA.551-201ENST00000384661 102 ntBASIC0.35□□□□□ -2.35
CCNA1P78396 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.35□□□□□ -2.35
CCNA1P78396 SNORA36B-201ENST00000410438 131 ntBASIC0.35□□□□□ -2.35
CCNA1P78396 AC138393.2-201ENST00000414742 246 ntBASIC0.35□□□□□ -2.35
CCNA1P78396 MTCO2P12-201ENST00000427426 682 ntBASIC0.35□□□□□ -2.35
CCNA1P78396 RNU6-830P-201ENST00000516353 107 ntBASIC0.35□□□□□ -2.35
CCNA1P78396 RNU4-77P-201ENST00000516692 156 ntBASIC0.35□□□□□ -2.35
CCNA1P78396 RPS29P30-201ENST00000600975 111 ntBASIC0.35□□□□□ -2.35
CCNA1P78396 AL132765.2-201ENST00000610812 351 ntBASIC0.35□□□□□ -2.35
CCNA1P78396 AC099654.14-201ENST00000638599 341 ntBASIC0.35□□□□□ -2.35
CCNA1P78396 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
CCNA1P78396 Y_RNA.143-201ENST00000363520 106 ntBASIC0.34□□□□□ -2.36
CCNA1P78396 Y_RNA.813-201ENST00000364639 102 ntBASIC0.34□□□□□ -2.36
CCNA1P78396 Y_RNA.537-201ENST00000384626 109 ntBASIC0.34□□□□□ -2.36
CCNA1P78396 MIR520F-201ENST00000384824 87 ntBASIC0.34□□□□□ -2.36
CCNA1P78396 MIR573-201ENST00000384964 99 ntBASIC0.34□□□□□ -2.36
CCNA1P78396 MIR520H-201ENST00000385126 88 ntBASIC0.34□□□□□ -2.36
CCNA1P78396 MIR140-201ENST00000385282 100 ntBASIC0.34□□□□□ -2.36
CCNA1P78396 RNA5SP63-201ENST00000391225 112 ntBASIC0.34□□□□□ -2.36
CCNA1P78396 SNORD83.1-201ENST00000411362 77 ntBASIC0.34□□□□□ -2.36
CCNA1P78396 AL160004.2-201ENST00000432935 350 ntBASIC0.34□□□□□ -2.36
CCNA1P78396 SNORD11-201ENST00000459124 84 ntBASIC0.34□□□□□ -2.36
CCNA1P78396 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
CCNA1P78396 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.34□□□□□ -2.36
CCNA1P78396 AC104695.3-201ENST00000604052 296 ntBASIC0.34□□□□□ -2.36
CCNA1P78396 AL121655.1-201ENST00000605811 308 ntBASIC0.34□□□□□ -2.36
CCNA1P78396 MIR377-201ENST00000362145 69 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 Y_RNA.39-201ENST00000362620 98 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 Y_RNA.286-201ENST00000364813 102 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 Y_RNA.376-201ENST00000365638 108 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 Y_RNA.439-201ENST00000384119 94 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 SNORA72.4-201ENST00000384174 132 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 RNU6-177P-201ENST00000411257 104 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 POLR2KP2-201ENST00000438155 177 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 Y_RNA.632-201ENST00000459189 102 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 SNORA68.3-201ENST00000515906 83 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.33□□□□□ -2.36
CCNA1P78396 MIR4771-2-201ENST00000577758 74 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 MIR2681-201ENST00000581814 105 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 MIR4771-1-201ENST00000582617 74 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 SNORD58B-201ENST00000607313 66 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 MIR2909-201ENST00000617113 69 ntBASIC0.33□□□□□ -2.36
CCNA1P78396 Y_RNA.68-201ENST00000362881 102 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 Y_RNA.80-201ENST00000362996 102 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 SNORA1.2-201ENST00000365189 134 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 RNY3-201ENST00000365484 102 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 Y_RNA.383-201ENST00000383855 97 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 Y_RNA.485-201ENST00000384395 102 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 RNU6-125P-201ENST00000384505 107 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 MT-TN-201ENST00000387400 73 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 RBMX2P4-201ENST00000441256 376 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 RNU7-152P-201ENST00000458982 64 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 SCARNA8-201ENST00000515924 131 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 RNU6-977P-201ENST00000516411 103 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 RNU7-25P-201ENST00000516544 62 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.32□□□□□ -2.36
CCNA1P78396 AP000753.3-201ENST00000604083 169 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 AC006441.5-201ENST00000612680 209 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 AL138825.1-201ENST00000618587 192 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 AL606534.2-204ENST00000635008 178 ntBASIC0.32□□□□□ -2.36
CCNA1P78396 RNU6-674P-201ENST00000363831 107 ntBASIC0.31□□□□□ -2.36
CCNA1P78396 Y_RNA.187-201ENST00000363918 113 ntBASIC0.31□□□□□ -2.36
CCNA1P78396 RNU6-801P-201ENST00000364087 105 ntBASIC0.31□□□□□ -2.36
CCNA1P78396 RNU4-67P-201ENST00000364569 141 ntBASIC0.31□□□□□ -2.36
CCNA1P78396 Y_RNA.471-201ENST00000384312 102 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms