Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RNU6-966P-201ENST00000516479 104 ntBASIC-1.15□□□□□ -2.59
LSM3P62310 RNA5SP66-201ENST00000517178 101 ntBASIC-1.15□□□□□ -2.59
LSM3P62310 RNU7-161P-201ENST00000517289 62 ntBASIC-1.15□□□□□ -2.59
LSM3P62310 MIR6759-201ENST00000638110 65 ntBASIC-1.15□□□□□ -2.59
LSM3P62310 RNU6-961P-201ENST00000363893 105 ntBASIC-1.16□□□□□ -2.6
LSM3P62310 RNU6-522P-201ENST00000364497 107 ntBASIC-1.16□□□□□ -2.6
LSM3P62310 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.16□□□□□ -2.6
LSM3P62310 MTCO2P19-201ENST00000427513 598 ntBASIC-1.16□□□□□ -2.6
LSM3P62310 RNU6-408P-201ENST00000515910 100 ntBASIC-1.16□□□□□ -2.6
LSM3P62310 RNU7-53P-201ENST00000516705 60 ntBASIC-1.16□□□□□ -2.6
LSM3P62310 AC060788.1-201ENST00000521318 469 ntBASIC-1.16□□□□□ -2.6
LSM3P62310 AP003072.1-201ENST00000531740 145 ntBASIC-1.16□□□□□ -2.6
LSM3P62310 AC124303.1-201ENST00000605703 360 ntBASIC-1.16□□□□□ -2.6
LSM3P62310 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.17□□□□□ -2.6
LSM3P62310 Y_RNA.85-201ENST00000363014 111 ntBASIC-1.17□□□□□ -2.6
LSM3P62310 RNU4-75P-201ENST00000364621 146 ntBASIC-1.17□□□□□ -2.6
LSM3P62310 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.17□□□□□ -2.6
LSM3P62310 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.17□□□□□ -2.6
LSM3P62310 Y_RNA.549-201ENST00000384657 102 ntBASIC-1.17□□□□□ -2.6
LSM3P62310 MIR190B-201ENST00000401119 79 ntBASIC-1.17□□□□□ -2.6
LSM3P62310 RNA5SP237-201ENST00000410414 113 ntBASIC-1.17□□□□□ -2.6
LSM3P62310 MTND3P16-201ENST00000452205 344 ntBASIC-1.17□□□□□ -2.6
LSM3P62310 SNORA25.13-201ENST00000516395 103 ntBASIC-1.17□□□□□ -2.6
LSM3P62310 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.17□□□□□ -2.6
LSM3P62310 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.17□□□□□ -2.6
LSM3P62310 MIR4802-201ENST00000581881 80 ntBASIC-1.17□□□□□ -2.6
LSM3P62310 MIR4273-201ENST00000582824 84 ntBASIC-1.17□□□□□ -2.6
LSM3P62310 AC063944.3-201ENST00000609969 533 ntBASIC-1.17□□□□□ -2.6
LSM3P62310 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.17□□□□□ -2.6
LSM3P62310 AC073869.9-201ENST00000641610 120 ntBASIC-1.17□□□□□ -2.6
LSM3P62310 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.18□□□□□ -2.6
LSM3P62310 Y_RNA.269-201ENST00000364685 89 ntBASIC-1.18□□□□□ -2.6
LSM3P62310 Y_RNA.355-201ENST00000365462 98 ntBASIC-1.18□□□□□ -2.6
LSM3P62310 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.18□□□□□ -2.6
LSM3P62310 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.18□□□□□ -2.6
LSM3P62310 RNU6-938P-201ENST00000411285 103 ntBASIC-1.18□□□□□ -2.6
LSM3P62310 USP9YP30-201ENST00000430729 455 ntBASIC-1.18□□□□□ -2.6
LSM3P62310 RNU6-436P-201ENST00000516171 114 ntBASIC-1.18□□□□□ -2.6
LSM3P62310 MIR5188-201ENST00000583467 113 ntBASIC-1.18□□□□□ -2.6
LSM3P62310 Y_RNA.205-201ENST00000364128 113 ntBASIC-1.19□□□□□ -2.6
LSM3P62310 MIR514A2-201ENST00000385131 88 ntBASIC-1.19□□□□□ -2.6
LSM3P62310 MIR514A3-201ENST00000385132 88 ntBASIC-1.19□□□□□ -2.6
LSM3P62310 MIR548I3-201ENST00000408378 149 ntBASIC-1.19□□□□□ -2.6
LSM3P62310 SNORD12B-201ENST00000410433 91 ntBASIC-1.19□□□□□ -2.6
LSM3P62310 RNA5SP451-201ENST00000410588 110 ntBASIC-1.19□□□□□ -2.6
LSM3P62310 MTND4LP16-201ENST00000440828 295 ntBASIC-1.19□□□□□ -2.6
LSM3P62310 AC010655.3-201ENST00000478818 450 ntBASIC-1.19□□□□□ -2.6
LSM3P62310 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.19□□□□□ -2.6
LSM3P62310 MRPS36P3-201ENST00000519284 130 ntBASIC-1.19□□□□□ -2.6
LSM3P62310 AC007751.1-201ENST00000529260 376 ntBASIC-1.19□□□□□ -2.6
LSM3P62310 AC060780.3-201ENST00000589464 80 ntBASIC-1.19□□□□□ -2.6
LSM3P62310 FGF7P2-201ENST00000332473 296 ntBASIC-1.2□□□□□ -2.6
LSM3P62310 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.2□□□□□ -2.6
LSM3P62310 RNA5SP484-201ENST00000458857 111 ntBASIC-1.2□□□□□ -2.6
LSM3P62310 MTND3P7-201ENST00000474435 343 ntBASIC-1.2□□□□□ -2.6
LSM3P62310 RPS29P24-201ENST00000486345 171 ntBASIC-1.2□□□□□ -2.6
LSM3P62310 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.2□□□□□ -2.6
LSM3P62310 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.2□□□□□ -2.6
LSM3P62310 RNU6-674P-201ENST00000363831 107 ntBASIC-1.21□□□□□ -2.6
LSM3P62310 SNORA27-201ENST00000384323 126 ntBASIC-1.21□□□□□ -2.6
LSM3P62310 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.21□□□□□ -2.6
LSM3P62310 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.21□□□□□ -2.6
LSM3P62310 MTATP6P17-201ENST00000431030 672 ntBASIC-1.21□□□□□ -2.6
LSM3P62310 MTND2P14-201ENST00000482139 351 ntBASIC-1.21□□□□□ -2.6
LSM3P62310 RNU6-311P-201ENST00000516224 102 ntBASIC-1.21□□□□□ -2.6
LSM3P62310 RNU6-759P-201ENST00000516740 103 ntBASIC-1.21□□□□□ -2.6
LSM3P62310 AC141846.1-201ENST00000568348 142 ntBASIC-1.21□□□□□ -2.6
LSM3P62310 MIR4493-201ENST00000584016 73 ntBASIC-1.21□□□□□ -2.6
LSM3P62310 AP003357.1-201ENST00000604497 148 ntBASIC-1.21□□□□□ -2.6
LSM3P62310 AC097520.1-201ENST00000624435 385 ntBASIC-1.21□□□□□ -2.6
LSM3P62310 RNU6-47P-201ENST00000383866 107 ntBASIC-1.22□□□□□ -2.6
LSM3P62310 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.22□□□□□ -2.6
LSM3P62310 RNU6-735P-201ENST00000410612 107 ntBASIC-1.22□□□□□ -2.6
LSM3P62310 RPL30P15-201ENST00000457129 321 ntBASIC-1.22□□□□□ -2.6
LSM3P62310 SNORD11-201ENST00000459124 84 ntBASIC-1.22□□□□□ -2.6
LSM3P62310 RNU7-45P-201ENST00000459460 63 ntBASIC-1.22□□□□□ -2.6
LSM3P62310 RNU6-261P-201ENST00000459506 102 ntBASIC-1.22□□□□□ -2.6
LSM3P62310 RNA5SP285-201ENST00000516619 119 ntBASIC-1.22□□□□□ -2.6
LSM3P62310 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.22□□□□□ -2.6
LSM3P62310 RNU7-116P-201ENST00000516940 62 ntBASIC-1.22□□□□□ -2.6
LSM3P62310 ZNF519P2-201ENST00000557032 169 ntBASIC-1.22□□□□□ -2.6
LSM3P62310 AC127455.1-201ENST00000565496 145 ntBASIC-1.22□□□□□ -2.6
LSM3P62310 AC018462.2-201ENST00000605375 395 ntBASIC-1.22□□□□□ -2.6
LSM3P62310 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 RNU6-865P-201ENST00000364772 107 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 RNU6-702P-201ENST00000364982 107 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 RNU6-455P-201ENST00000384681 107 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 RNY3P10-201ENST00000384764 102 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 MIR613-201ENST00000385248 95 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 SNORD41.1-201ENST00000391000 69 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 SNORA40.5-201ENST00000391061 128 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 AL590004.1-201ENST00000405321 300 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 MTND3P21-201ENST00000433774 331 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.23□□□□□ -2.61
LSM3P62310 AL445193.1-201ENST00000441183 141 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 RNU6-155P-201ENST00000516347 100 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 RNU7-188P-201ENST00000517063 64 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 AF246928.1-201ENST00000623768 87 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 AC093726.3-201ENST00000637588 150 ntBASIC-1.23□□□□□ -2.61
LSM3P62310 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms