Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNU6-508P-201ENST00000363231 103 ntBASIC2.24□□□□□ -2.05
GFRA1P56159 Y_RNA.241-201ENST00000364470 117 ntBASIC2.24□□□□□ -2.05
GFRA1P56159 RNU1-138P-201ENST00000384093 164 ntBASIC2.24□□□□□ -2.05
GFRA1P56159 AL627390.1-201ENST00000396055 340 ntBASIC2.24□□□□□ -2.05
GFRA1P56159 AL359511.1-201ENST00000402970 211 ntBASIC2.24□□□□□ -2.05
GFRA1P56159 RNU6-735P-201ENST00000410612 107 ntBASIC2.24□□□□□ -2.05
GFRA1P56159 RNU6-938P-201ENST00000411285 103 ntBASIC2.24□□□□□ -2.05
GFRA1P56159 Y_RNA.629-201ENST00000411368 105 ntBASIC2.24□□□□□ -2.05
GFRA1P56159 AL021397.1-201ENST00000451806 248 ntBASIC2.24□□□□□ -2.05
GFRA1P56159 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.24□□□□□ -2.05
GFRA1P56159 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.24□□□□□ -2.05
GFRA1P56159 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.24□□□□□ -2.05
GFRA1P56159 MIR203B-201ENST00000636080 86 ntBASIC2.24□□□□□ -2.05
GFRA1P56159 RNU6-1123P-201ENST00000362347 106 ntBASIC2.23□□□□□ -2.05
GFRA1P56159 Y_RNA.440-201ENST00000384120 114 ntBASIC2.23□□□□□ -2.05
GFRA1P56159 Y_RNA.651-201ENST00000459380 103 ntBASIC2.23□□□□□ -2.05
GFRA1P56159 RNU7-80P-201ENST00000459562 61 ntBASIC2.23□□□□□ -2.05
GFRA1P56159 RNU6-772P-201ENST00000516042 105 ntBASIC2.23□□□□□ -2.05
GFRA1P56159 RNU6-1061P-201ENST00000516530 99 ntBASIC2.23□□□□□ -2.05
GFRA1P56159 SNORA31.15-201ENST00000516771 132 ntBASIC2.23□□□□□ -2.05
GFRA1P56159 MIR4446-201ENST00000578505 67 ntBASIC2.23□□□□□ -2.05
GFRA1P56159 MIR4287-201ENST00000579398 78 ntBASIC2.23□□□□□ -2.05
GFRA1P56159 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
GFRA1P56159 ZNF720P1-201ENST00000562403 1939 ntBASIC2.23□□□□□ -2.05
GFRA1P56159 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.22□□□□□ -2.05
GFRA1P56159 AL442644.1-201ENST00000454390 3105 ntBASIC2.22□□□□□ -2.05
GFRA1P56159 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
GFRA1P56159 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
GFRA1P56159 SNORA1.2-201ENST00000365189 134 ntBASIC2.22□□□□□ -2.05
GFRA1P56159 Y_RNA.454-201ENST00000384224 113 ntBASIC2.22□□□□□ -2.05
GFRA1P56159 SNORA40.5-201ENST00000391061 128 ntBASIC2.22□□□□□ -2.05
GFRA1P56159 MIR1267-201ENST00000408723 78 ntBASIC2.22□□□□□ -2.05
GFRA1P56159 Y_RNA.712-201ENST00000517011 92 ntBASIC2.22□□□□□ -2.05
GFRA1P56159 IGLV3-17-201ENST00000519099 244 ntBASIC2.22□□□□□ -2.05
GFRA1P56159 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.22□□□□□ -2.05
GFRA1P56159 FO624990.1-201ENST00000636373 85 ntBASIC2.22□□□□□ -2.05
GFRA1P56159 RNU6-414P-201ENST00000363705 104 ntBASIC2.21□□□□□ -2.06
GFRA1P56159 Y_RNA.273-201ENST00000364703 102 ntBASIC2.21□□□□□ -2.06
GFRA1P56159 RNU1-133P-201ENST00000364867 167 ntBASIC2.21□□□□□ -2.06
GFRA1P56159 Y_RNA.351-201ENST00000365436 96 ntBASIC2.21□□□□□ -2.06
GFRA1P56159 U8.17-201ENST00000391292 132 ntBASIC2.21□□□□□ -2.06
GFRA1P56159 AC107297.1-201ENST00000459991 176 ntBASIC2.21□□□□□ -2.06
GFRA1P56159 MIR4435-1-201ENST00000582552 80 ntBASIC2.21□□□□□ -2.06
GFRA1P56159 AC016717.2-201ENST00000609089 5141 ntBASIC2.21□□□□□ -2.06
GFRA1P56159 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
GFRA1P56159 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
GFRA1P56159 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
GFRA1P56159 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
GFRA1P56159 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-34-201ENST00000362441 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-12-201ENST00000362583 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-29-201ENST00000362834 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-9-201ENST00000362912 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-21-201ENST00000362963 81 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-14-201ENST00000363090 81 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-13-201ENST00000363358 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-41-201ENST00000363608 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-11-201ENST00000363616 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-5-201ENST00000363633 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-39-201ENST00000363694 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-4-201ENST00000363810 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-16-201ENST00000363887 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-6-201ENST00000363942 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-42-201ENST00000364273 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORA16B-201ENST00000364674 135 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-15-201ENST00000364809 81 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-1-201ENST00000364961 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-26-201ENST00000365067 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-10-201ENST00000365073 81 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 RNA5SP126-201ENST00000365092 109 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-43-201ENST00000365503 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-36-201ENST00000365629 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORA27-201ENST00000384323 126 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.2□□□□□ -2.06
GFRA1P56159 RNU7-181P-201ENST00000517234 74 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 AC090821.2-201ENST00000523552 176 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 SNORD115-40-201ENST00000606510 82 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 AC010297.1-201ENST00000623948 149 ntBASIC2.2□□□□□ -2.06
GFRA1P56159 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.2□□□□□ -2.06
GFRA1P56159 Y_RNA.525-201ENST00000384570 113 ntBASIC2.19□□□□□ -2.06
GFRA1P56159 Y_RNA.563-201ENST00000384707 108 ntBASIC2.19□□□□□ -2.06
GFRA1P56159 AC244636.1-201ENST00000421152 228 ntBASIC2.19□□□□□ -2.06
GFRA1P56159 AC234781.5-201ENST00000508429 271 ntBASIC2.19□□□□□ -2.06
GFRA1P56159 AC103810.6-201ENST00000606708 136 ntBASIC2.19□□□□□ -2.06
GFRA1P56159 AL773524.1-201ENST00000614065 229 ntBASIC2.19□□□□□ -2.06
GFRA1P56159 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.19□□□□□ -2.06
GFRA1P56159 U6.95-201ENST00000636931 70 ntBASIC2.19□□□□□ -2.06
GFRA1P56159 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
GFRA1P56159 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
GFRA1P56159 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.18□□□□□ -2.06
GFRA1P56159 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
GFRA1P56159 Z82195.2-201ENST00000612348 18351 ntBASIC2.18□□□□□ -2.06
GFRA1P56159 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
GFRA1P56159 RNU6-834P-201ENST00000362367 110 ntBASIC2.18□□□□□ -2.06
GFRA1P56159 SNORD58C-201ENST00000365223 64 ntBASIC2.18□□□□□ -2.06
GFRA1P56159 RNU6-203P-201ENST00000384038 104 ntBASIC2.18□□□□□ -2.06
GFRA1P56159 MIR526A1-201ENST00000384897 85 ntBASIC2.18□□□□□ -2.06
GFRA1P56159 Y_RNA.617-201ENST00000410920 90 ntBASIC2.18□□□□□ -2.06
GFRA1P56159 RN7SKP192-201ENST00000411291 327 ntBASIC2.18□□□□□ -2.06
GFRA1P56159 RN7SKP19-201ENST00000516016 252 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms