Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 Y_RNA.82-201ENST00000363000 102 ntBASIC1.25□□□□□ -2.21
PDX1P52945 Y_RNA.92-201ENST00000363043 102 ntBASIC1.25□□□□□ -2.21
PDX1P52945 Y_RNA.235-201ENST00000364412 102 ntBASIC1.25□□□□□ -2.21
PDX1P52945 Y_RNA.288-201ENST00000364854 92 ntBASIC1.25□□□□□ -2.21
PDX1P52945 Y_RNA.306-201ENST00000365015 102 ntBASIC1.25□□□□□ -2.21
PDX1P52945 Y_RNA.312-201ENST00000365089 102 ntBASIC1.25□□□□□ -2.21
PDX1P52945 Y_RNA.322-201ENST00000365151 102 ntBASIC1.25□□□□□ -2.21
PDX1P52945 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.25□□□□□ -2.21
PDX1P52945 SNRPGP14-201ENST00000435400 219 ntBASIC1.25□□□□□ -2.21
PDX1P52945 HMGN2P32-201ENST00000444648 269 ntBASIC1.25□□□□□ -2.21
PDX1P52945 Y_RNA.650-201ENST00000459002 102 ntBASIC1.25□□□□□ -2.21
PDX1P52945 RPL30P7-201ENST00000479312 323 ntBASIC1.25□□□□□ -2.21
PDX1P52945 Y_RNA.777-201ENST00000516982 102 ntBASIC1.25□□□□□ -2.21
PDX1P52945 Y_RNA.771-201ENST00000598668 102 ntBASIC1.25□□□□□ -2.21
PDX1P52945 Y_RNA.789-201ENST00000622480 102 ntBASIC1.25□□□□□ -2.21
PDX1P52945 Y_RNA.54-201ENST00000362766 105 ntBASIC1.24□□□□□ -2.21
PDX1P52945 SNORD14E-201ENST00000364009 85 ntBASIC1.24□□□□□ -2.21
PDX1P52945 Y_RNA.277-201ENST00000364754 102 ntBASIC1.24□□□□□ -2.21
PDX1P52945 Y_RNA.352-201ENST00000365439 102 ntBASIC1.24□□□□□ -2.21
PDX1P52945 Y_RNA.562-201ENST00000384695 113 ntBASIC1.24□□□□□ -2.21
PDX1P52945 Y_RNA.590-201ENST00000410140 107 ntBASIC1.24□□□□□ -2.21
PDX1P52945 MTND1P19-201ENST00000511780 315 ntBASIC1.24□□□□□ -2.21
PDX1P52945 SNORD111.1-201ENST00000516421 86 ntBASIC1.24□□□□□ -2.21
PDX1P52945 RN7SKP88-201ENST00000516847 250 ntBASIC1.24□□□□□ -2.21
PDX1P52945 Y_RNA.714-201ENST00000517065 90 ntBASIC1.24□□□□□ -2.21
PDX1P52945 AC068338.1-201ENST00000565567 176 ntBASIC1.24□□□□□ -2.21
PDX1P52945 MIR4724-201ENST00000579485 89 ntBASIC1.24□□□□□ -2.21
PDX1P52945 AC087685.1-201ENST00000587507 141 ntBASIC1.24□□□□□ -2.21
PDX1P52945 AL049861.1-201ENST00000603130 150 ntBASIC1.24□□□□□ -2.21
PDX1P52945 GHRLOS.1-201ENST00000610995 70 ntBASIC1.24□□□□□ -2.21
PDX1P52945 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.24□□□□□ -2.21
PDX1P52945 7SK.8-201ENST00000612110 250 ntBASIC1.24□□□□□ -2.21
PDX1P52945 7SK.11-201ENST00000615477 250 ntBASIC1.24□□□□□ -2.21
PDX1P52945 RMST_2.1-201ENST00000617263 136 ntBASIC1.24□□□□□ -2.21
PDX1P52945 7SK.13-201ENST00000622040 250 ntBASIC1.24□□□□□ -2.21
PDX1P52945 RNU1-93P-201ENST00000364704 169 ntBASIC1.23□□□□□ -2.21
PDX1P52945 MIR150-201ENST00000385048 84 ntBASIC1.23□□□□□ -2.21
PDX1P52945 MIR526A2-201ENST00000390198 65 ntBASIC1.23□□□□□ -2.21
PDX1P52945 MIR758-201ENST00000390227 88 ntBASIC1.23□□□□□ -2.21
PDX1P52945 AC015922.2-201ENST00000435593 184 ntBASIC1.23□□□□□ -2.21
PDX1P52945 RNU6-1132P-201ENST00000459214 107 ntBASIC1.23□□□□□ -2.21
PDX1P52945 RNU6-322P-201ENST00000516010 103 ntBASIC1.23□□□□□ -2.21
PDX1P52945 SNORD116-28-201ENST00000516123 91 ntBASIC1.23□□□□□ -2.21
PDX1P52945 AL160236.1-201ENST00000556317 195 ntBASIC1.23□□□□□ -2.21
PDX1P52945 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.23□□□□□ -2.21
PDX1P52945 MIR4503-201ENST00000582187 83 ntBASIC1.23□□□□□ -2.21
PDX1P52945 MIR4282-201ENST00000583613 67 ntBASIC1.23□□□□□ -2.21
PDX1P52945 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
PDX1P52945 Y_RNA.802-201ENST00000614892 130 ntBASIC1.23□□□□□ -2.21
PDX1P52945 AL161722.3-201ENST00000605789 2983 ntBASIC1.22□□□□□ -2.21
PDX1P52945 Y_RNA.24-201ENST00000362508 103 ntBASIC1.22□□□□□ -2.21
PDX1P52945 Y_RNA.76-201ENST00000362931 109 ntBASIC1.22□□□□□ -2.21
PDX1P52945 Y_RNA.477-201ENST00000384352 108 ntBASIC1.22□□□□□ -2.21
PDX1P52945 MIR1302-3-201ENST00000408128 138 ntBASIC1.22□□□□□ -2.21
PDX1P52945 RPS29P23-201ENST00000458635 123 ntBASIC1.22□□□□□ -2.21
PDX1P52945 Y_RNA.680-201ENST00000516441 93 ntBASIC1.22□□□□□ -2.21
PDX1P52945 AC006006.1-201ENST00000603082 144 ntBASIC1.22□□□□□ -2.21
PDX1P52945 AL162730.1-201ENST00000605734 292 ntBASIC1.22□□□□□ -2.21
PDX1P52945 AL096861.1-201ENST00000610899 123 ntBASIC1.22□□□□□ -2.21
PDX1P52945 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.22□□□□□ -2.21
PDX1P52945 MIR6767-201ENST00000637302 66 ntBASIC1.22□□□□□ -2.21
PDX1P52945 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PDX1P52945 SNORD114-27-201ENST00000363766 70 ntBASIC1.21□□□□□ -2.22
PDX1P52945 Y_RNA.193-201ENST00000363979 102 ntBASIC1.21□□□□□ -2.22
PDX1P52945 RNU6-268P-201ENST00000364174 107 ntBASIC1.21□□□□□ -2.22
PDX1P52945 Y_RNA.229-201ENST00000364347 113 ntBASIC1.21□□□□□ -2.22
PDX1P52945 RNU6-442P-201ENST00000383968 104 ntBASIC1.21□□□□□ -2.22
PDX1P52945 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
PDX1P52945 RNU6-196P-201ENST00000384315 107 ntBASIC1.21□□□□□ -2.22
PDX1P52945 MIR802-201ENST00000390235 94 ntBASIC1.21□□□□□ -2.22
PDX1P52945 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.21□□□□□ -2.22
PDX1P52945 snoU13.25-201ENST00000458945 104 ntBASIC1.21□□□□□ -2.22
PDX1P52945 COX6CP14-201ENST00000469580 174 ntBASIC1.21□□□□□ -2.22
PDX1P52945 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.21□□□□□ -2.22
PDX1P52945 Y_RNA.679-201ENST00000516416 91 ntBASIC1.21□□□□□ -2.22
PDX1P52945 RNU7-149P-201ENST00000516739 59 ntBASIC1.21□□□□□ -2.22
PDX1P52945 AC011921.3-201ENST00000605540 361 ntBASIC1.21□□□□□ -2.22
PDX1P52945 uc_338.4-201ENST00000616635 176 ntBASIC1.21□□□□□ -2.22
PDX1P52945 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
PDX1P52945 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
PDX1P52945 SNORD27-201ENST00000363981 72 ntBASIC1.2□□□□□ -2.22
PDX1P52945 Y_RNA.540-201ENST00000384638 111 ntBASIC1.2□□□□□ -2.22
PDX1P52945 Y_RNA.556-201ENST00000384677 113 ntBASIC1.2□□□□□ -2.22
PDX1P52945 SNORA8.3-201ENST00000384679 139 ntBASIC1.2□□□□□ -2.22
PDX1P52945 MIR136-201ENST00000385207 82 ntBASIC1.2□□□□□ -2.22
PDX1P52945 MIR548H3-201ENST00000408771 118 ntBASIC1.2□□□□□ -2.22
PDX1P52945 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.2□□□□□ -2.22
PDX1P52945 RNU6-947P-201ENST00000516264 106 ntBASIC1.2□□□□□ -2.22
PDX1P52945 SNORA18.7-201ENST00000516910 131 ntBASIC1.2□□□□□ -2.22
PDX1P52945 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
PDX1P52945 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PDX1P52945 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
PDX1P52945 RNA5SP327-201ENST00000362494 101 ntBASIC1.19□□□□□ -2.22
PDX1P52945 Y_RNA.144-201ENST00000363521 113 ntBASIC1.19□□□□□ -2.22
PDX1P52945 snoU2_19.4-201ENST00000364329 80 ntBASIC1.19□□□□□ -2.22
PDX1P52945 Y_RNA.304-201ENST00000365011 112 ntBASIC1.19□□□□□ -2.22
PDX1P52945 Y_RNA.416-201ENST00000384014 113 ntBASIC1.19□□□□□ -2.22
PDX1P52945 Y_RNA.539-201ENST00000384635 107 ntBASIC1.19□□□□□ -2.22
PDX1P52945 MIR626-201ENST00000385032 94 ntBASIC1.19□□□□□ -2.22
PDX1P52945 RNA5SP496-201ENST00000391240 109 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms