Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.13□□□□□ -2.23
CCR9P51686 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.13□□□□□ -2.23
CCR9P51686 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.13□□□□□ -2.23
CCR9P51686 RNU1-123P-201ENST00000458950 160 ntBASIC1.13□□□□□ -2.23
CCR9P51686 Y_RNA.650-201ENST00000459002 102 ntBASIC1.13□□□□□ -2.23
CCR9P51686 COX6CP14-201ENST00000469580 174 ntBASIC1.13□□□□□ -2.23
CCR9P51686 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
CCR9P51686 SCARNA8-201ENST00000515924 131 ntBASIC1.13□□□□□ -2.23
CCR9P51686 RNU11-2P-201ENST00000516898 142 ntBASIC1.13□□□□□ -2.23
CCR9P51686 Y_RNA.777-201ENST00000516982 102 ntBASIC1.13□□□□□ -2.23
CCR9P51686 RNU7-181P-201ENST00000517234 74 ntBASIC1.13□□□□□ -2.23
CCR9P51686 Y_RNA.771-201ENST00000598668 102 ntBASIC1.13□□□□□ -2.23
CCR9P51686 AC012676.2-201ENST00000619258 186 ntBASIC1.13□□□□□ -2.23
CCR9P51686 Y_RNA.789-201ENST00000622480 102 ntBASIC1.13□□□□□ -2.23
CCR9P51686 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CCR9P51686 RNU4-10P-201ENST00000364383 140 ntBASIC1.12□□□□□ -2.23
CCR9P51686 Y_RNA.483-201ENST00000384380 101 ntBASIC1.12□□□□□ -2.23
CCR9P51686 RNU6-738P-201ENST00000384531 106 ntBASIC1.12□□□□□ -2.23
CCR9P51686 Y_RNA.537-201ENST00000384626 109 ntBASIC1.12□□□□□ -2.23
CCR9P51686 MT-TW-201ENST00000387382 68 ntBASIC1.12□□□□□ -2.23
CCR9P51686 MRPL35P3-201ENST00000421557 364 ntBASIC1.12□□□□□ -2.23
CCR9P51686 SNORD2.1-201ENST00000458762 69 ntBASIC1.12□□□□□ -2.23
CCR9P51686 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.12□□□□□ -2.23
CCR9P51686 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.12□□□□□ -2.23
CCR9P51686 RNU7-25P-201ENST00000516544 62 ntBASIC1.12□□□□□ -2.23
CCR9P51686 ZNF209P-201ENST00000593450 2304 ntBASIC1.11□□□□□ -2.23
CCR9P51686 Y_RNA.24-201ENST00000362508 103 ntBASIC1.11□□□□□ -2.23
CCR9P51686 Y_RNA.229-201ENST00000364347 113 ntBASIC1.11□□□□□ -2.23
CCR9P51686 SNORD114-24-201ENST00000365029 72 ntBASIC1.11□□□□□ -2.23
CCR9P51686 SNORA51.10-201ENST00000384418 136 ntBASIC1.11□□□□□ -2.23
CCR9P51686 Y_RNA.547-201ENST00000384654 119 ntBASIC1.11□□□□□ -2.23
CCR9P51686 MIR626-201ENST00000385032 94 ntBASIC1.11□□□□□ -2.23
CCR9P51686 Y_RNA.587-201ENST00000391210 103 ntBASIC1.11□□□□□ -2.23
CCR9P51686 Y_RNA.590-201ENST00000410140 107 ntBASIC1.11□□□□□ -2.23
CCR9P51686 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.11□□□□□ -2.23
CCR9P51686 RPS29P29-201ENST00000456396 171 ntBASIC1.11□□□□□ -2.23
CCR9P51686 AC090821.2-201ENST00000523552 176 ntBASIC1.11□□□□□ -2.23
CCR9P51686 AC100767.1-201ENST00000528178 123 ntBASIC1.11□□□□□ -2.23
CCR9P51686 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CCR9P51686 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.11□□□□□ -2.23
CCR9P51686 HSPE1P19-201ENST00000603327 295 ntBASIC1.11□□□□□ -2.23
CCR9P51686 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CCR9P51686 Y_RNA.149-201ENST00000363558 117 ntBASIC1.1□□□□□ -2.23
CCR9P51686 Y_RNA.330-201ENST00000365230 109 ntBASIC1.1□□□□□ -2.23
CCR9P51686 Y_RNA.459-201ENST00000384251 102 ntBASIC1.1□□□□□ -2.23
CCR9P51686 RNU6-847P-201ENST00000411115 108 ntBASIC1.1□□□□□ -2.23
CCR9P51686 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.1□□□□□ -2.23
CCR9P51686 AC009474.2-201ENST00000451383 136 ntBASIC1.1□□□□□ -2.23
CCR9P51686 UBL5P1-201ENST00000507979 193 ntBASIC1.1□□□□□ -2.23
CCR9P51686 RNU1-92P-201ENST00000517017 135 ntBASIC1.1□□□□□ -2.23
CCR9P51686 MIR3660-201ENST00000584845 100 ntBASIC1.1□□□□□ -2.23
CCR9P51686 RNU6-472P-201ENST00000384299 107 ntBASIC1.09□□□□□ -2.23
CCR9P51686 SNORA40.6-201ENST00000391153 128 ntBASIC1.09□□□□□ -2.23
CCR9P51686 AL392103.1-201ENST00000447000 198 ntBASIC1.09□□□□□ -2.23
CCR9P51686 SNORD124-201ENST00000459577 104 ntBASIC1.09□□□□□ -2.23
CCR9P51686 AC004223.1-201ENST00000479840 271 ntBASIC1.09□□□□□ -2.23
CCR9P51686 Y_RNA.666-201ENST00000516187 112 ntBASIC1.09□□□□□ -2.23
CCR9P51686 Y_RNA.679-201ENST00000516416 91 ntBASIC1.09□□□□□ -2.23
CCR9P51686 AC109810.1-201ENST00000534066 224 ntBASIC1.09□□□□□ -2.23
CCR9P51686 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CCR9P51686 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.08□□□□□ -2.24
CCR9P51686 SNORD24-201ENST00000383884 75 ntBASIC1.08□□□□□ -2.24
CCR9P51686 Y_RNA.486-201ENST00000384398 107 ntBASIC1.08□□□□□ -2.24
CCR9P51686 MIR570-201ENST00000384917 97 ntBASIC1.08□□□□□ -2.24
CCR9P51686 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.08□□□□□ -2.24
CCR9P51686 AC107297.1-201ENST00000459991 176 ntBASIC1.08□□□□□ -2.24
CCR9P51686 RNU2-13P-201ENST00000515909 113 ntBASIC1.08□□□□□ -2.24
CCR9P51686 MIR4661-201ENST00000582720 75 ntBASIC1.08□□□□□ -2.24
CCR9P51686 Y_RNA.47-201ENST00000362697 108 ntBASIC1.07□□□□□ -2.24
CCR9P51686 Y_RNA.352-201ENST00000365439 102 ntBASIC1.07□□□□□ -2.24
CCR9P51686 RNY3P5-201ENST00000384127 102 ntBASIC1.07□□□□□ -2.24
CCR9P51686 Y_RNA.572-201ENST00000384757 98 ntBASIC1.07□□□□□ -2.24
CCR9P51686 SNORA26-201ENST00000391286 122 ntBASIC1.07□□□□□ -2.24
CCR9P51686 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.07□□□□□ -2.24
CCR9P51686 MIR942-201ENST00000401111 86 ntBASIC1.07□□□□□ -2.24
CCR9P51686 MIR4282-201ENST00000583613 67 ntBASIC1.07□□□□□ -2.24
CCR9P51686 MIR4781-201ENST00000585250 76 ntBASIC1.07□□□□□ -2.24
CCR9P51686 AL360085.1-201ENST00000604713 532 ntBASIC1.07□□□□□ -2.24
CCR9P51686 MIR4791-201ENST00000607666 84 ntBASIC1.07□□□□□ -2.24
CCR9P51686 SNORD115-28-201ENST00000363931 81 ntBASIC1.06□□□□□ -2.24
CCR9P51686 Y_RNA.304-201ENST00000365011 112 ntBASIC1.06□□□□□ -2.24
CCR9P51686 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
CCR9P51686 MIR1302-7-201ENST00000408841 72 ntBASIC1.06□□□□□ -2.24
CCR9P51686 RNU2-55P-201ENST00000411146 174 ntBASIC1.06□□□□□ -2.24
CCR9P51686 AL358176.2-201ENST00000425769 204 ntBASIC1.06□□□□□ -2.24
CCR9P51686 AL591806.2-201ENST00000433122 173 ntBASIC1.06□□□□□ -2.24
CCR9P51686 AC087499.4-201ENST00000448505 178 ntBASIC1.06□□□□□ -2.24
CCR9P51686 RNU6-365P-201ENST00000517113 106 ntBASIC1.06□□□□□ -2.24
CCR9P51686 AC131055.1-201ENST00000584626 316 ntBASIC1.06□□□□□ -2.24
CCR9P51686 AP000942.3-201ENST00000603702 160 ntBASIC1.06□□□□□ -2.24
CCR9P51686 AC243994.1-201ENST00000618627 109 ntBASIC1.06□□□□□ -2.24
CCR9P51686 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.06□□□□□ -2.24
CCR9P51686 SNORD115-34-201ENST00000362441 82 ntBASIC1.05□□□□□ -2.24
CCR9P51686 SNORD115-12-201ENST00000362583 82 ntBASIC1.05□□□□□ -2.24
CCR9P51686 SNORD115-29-201ENST00000362834 82 ntBASIC1.05□□□□□ -2.24
CCR9P51686 SNORD115-9-201ENST00000362912 82 ntBASIC1.05□□□□□ -2.24
CCR9P51686 SNORD115-21-201ENST00000362963 81 ntBASIC1.05□□□□□ -2.24
CCR9P51686 RNU1-17P-201ENST00000363022 152 ntBASIC1.05□□□□□ -2.24
CCR9P51686 SNORD115-14-201ENST00000363090 81 ntBASIC1.05□□□□□ -2.24
CCR9P51686 RNU6-1309P-201ENST00000363305 108 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 252.2 ms