Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC024405.2-202ENST00000532731 184 ntBASIC-1.09□□□□□ -2.58
SRP9P49458 MIR4491-201ENST00000581087 68 ntBASIC-1.09□□□□□ -2.58
SRP9P49458 AP001330.5-201ENST00000607176 411 ntBASIC-1.09□□□□□ -2.58
SRP9P49458 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-34-201ENST00000362441 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-12-201ENST00000362583 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-29-201ENST00000362834 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-9-201ENST00000362912 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-21-201ENST00000362963 81 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-14-201ENST00000363090 81 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-13-201ENST00000363358 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-41-201ENST00000363608 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-11-201ENST00000363616 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-5-201ENST00000363633 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-39-201ENST00000363694 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-4-201ENST00000363810 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-16-201ENST00000363887 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-6-201ENST00000363942 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 RNU6-595P-201ENST00000363944 107 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-42-201ENST00000364273 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-15-201ENST00000364809 81 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-1-201ENST00000364961 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-26-201ENST00000365067 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-10-201ENST00000365073 81 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-43-201ENST00000365503 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-36-201ENST00000365629 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 RNU6-128P-201ENST00000383976 107 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.1□□□□□ -2.59
SRP9P49458 RNU2-11P-201ENST00000459191 187 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 AC083904.1-201ENST00000487828 231 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 RNU6-138P-201ENST00000515952 107 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 MIR4273-201ENST00000582824 84 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 SNORD115-40-201ENST00000606510 82 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 AP001282.2-201ENST00000616149 309 ntBASIC-1.1□□□□□ -2.59
SRP9P49458 RNU6-490P-201ENST00000362985 107 ntBASIC-1.11□□□□□ -2.59
SRP9P49458 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.11□□□□□ -2.59
SRP9P49458 RNU6-601P-201ENST00000384540 107 ntBASIC-1.11□□□□□ -2.59
SRP9P49458 snoU13.19-201ENST00000459148 104 ntBASIC-1.11□□□□□ -2.59
SRP9P49458 RNU7-87P-201ENST00000459343 62 ntBASIC-1.11□□□□□ -2.59
SRP9P49458 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.11□□□□□ -2.59
SRP9P49458 AC055872.1-201ENST00000570978 278 ntBASIC-1.11□□□□□ -2.59
SRP9P49458 RNU6-254P-201ENST00000363377 107 ntBASIC-1.12□□□□□ -2.59
SRP9P49458 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.12□□□□□ -2.59
SRP9P49458 IGKV1-22-201ENST00000524313 326 ntBASIC-1.12□□□□□ -2.59
SRP9P49458 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.12□□□□□ -2.59
SRP9P49458 AP000942.4-201ENST00000604811 241 ntBASIC-1.12□□□□□ -2.59
SRP9P49458 AC124303.1-201ENST00000605703 360 ntBASIC-1.12□□□□□ -2.59
SRP9P49458 SNORD114-14-201ENST00000362723 75 ntBASIC-1.13□□□□□ -2.59
SRP9P49458 SNORA72.3-201ENST00000365074 132 ntBASIC-1.13□□□□□ -2.59
SRP9P49458 MIR516B1-201ENST00000385211 90 ntBASIC-1.13□□□□□ -2.59
SRP9P49458 MTCO2P8-201ENST00000412213 658 ntBASIC-1.13□□□□□ -2.59
SRP9P49458 AL353193.1-201ENST00000421444 268 ntBASIC-1.13□□□□□ -2.59
SRP9P49458 RNU6-437P-201ENST00000459408 95 ntBASIC-1.13□□□□□ -2.59
SRP9P49458 RNA5SP476-201ENST00000516613 103 ntBASIC-1.13□□□□□ -2.59
SRP9P49458 RNU7-53P-201ENST00000516705 60 ntBASIC-1.13□□□□□ -2.59
SRP9P49458 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.14□□□□□ -2.59
SRP9P49458 SNORA63.5-201ENST00000363548 123 ntBASIC-1.14□□□□□ -2.59
SRP9P49458 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.14□□□□□ -2.59
SRP9P49458 RNA5SP237-201ENST00000410414 113 ntBASIC-1.14□□□□□ -2.59
SRP9P49458 RNU6-408P-201ENST00000515910 100 ntBASIC-1.14□□□□□ -2.59
SRP9P49458 MIR548AX-201ENST00000580117 73 ntBASIC-1.14□□□□□ -2.59
SRP9P49458 AC018638.8-201ENST00000588755 281 ntBASIC-1.14□□□□□ -2.59
SRP9P49458 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 RNU6-926P-201ENST00000384075 107 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 RNU6-318P-201ENST00000384283 103 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 RNU6-306P-201ENST00000384617 107 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 SNORD110-201ENST00000408189 75 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 MIR1278-201ENST00000408753 81 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 BX276092.1-201ENST00000427368 251 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 MTND3P16-201ENST00000452205 344 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.15□□□□□ -2.59
SRP9P49458 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 RNU6-311P-201ENST00000516224 102 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 SNORA25.16-201ENST00000516741 121 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 RNA5SP66-201ENST00000517178 101 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 AP003072.1-201ENST00000531740 145 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 AL662814.1-201ENST00000617364 121 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 AC073869.9-201ENST00000641610 120 ntBASIC-1.15□□□□□ -2.59
SRP9P49458 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.16□□□□□ -2.6
SRP9P49458 RNU4-75P-201ENST00000364621 146 ntBASIC-1.16□□□□□ -2.6
SRP9P49458 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.16□□□□□ -2.6
SRP9P49458 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.16□□□□□ -2.6
SRP9P49458 MIR190B-201ENST00000401119 79 ntBASIC-1.16□□□□□ -2.6
SRP9P49458 MIR548O-201ENST00000408583 114 ntBASIC-1.16□□□□□ -2.6
SRP9P49458 AC096949.1-201ENST00000412047 152 ntBASIC-1.16□□□□□ -2.6
SRP9P49458 AC006210.1-201ENST00000424882 111 ntBASIC-1.16□□□□□ -2.6
SRP9P49458 MTND2P14-201ENST00000482139 351 ntBASIC-1.16□□□□□ -2.6
SRP9P49458 RNU6-966P-201ENST00000516479 104 ntBASIC-1.16□□□□□ -2.6
SRP9P49458 RNA5SP169-201ENST00000517268 117 ntBASIC-1.16□□□□□ -2.6
SRP9P49458 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.16□□□□□ -2.6
SRP9P49458 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.16□□□□□ -2.6
SRP9P49458 MIR5188-201ENST00000583467 113 ntBASIC-1.16□□□□□ -2.6
SRP9P49458 AL596211.1-201ENST00000569873 2277 ntBASIC-1.16□□□□□ -2.6
SRP9P49458 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.17□□□□□ -2.6
SRP9P49458 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.17□□□□□ -2.6
SRP9P49458 AP001328.1-201ENST00000528550 176 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 206.4 ms