Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 SNORD115-6-201ENST00000363942 82 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 SNORD115-42-201ENST00000364273 82 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 SNORD115-15-201ENST00000364809 81 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 SNORD115-1-201ENST00000364961 82 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 SNORD115-26-201ENST00000365067 82 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 SNORD115-10-201ENST00000365073 81 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 SNORD115-43-201ENST00000365503 82 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 SNORD115-36-201ENST00000365629 82 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 RNU6-926P-201ENST00000384075 107 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 RNU6-20P-201ENST00000384106 107 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 RNU7-73P-201ENST00000458743 63 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 RNU7-67P-201ENST00000459003 62 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 RNU7-115P-201ENST00000516433 55 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 MIR2681-201ENST00000581814 105 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 SNORD115-40-201ENST00000606510 82 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 MIR1244-1-201ENST00000612829 85 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 MIR8066-201ENST00000617280 78 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 uc_338.22-201ENST00000622722 187 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 AC067863.3-201ENST00000624172 122 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 MIR1244-3-201ENST00000635744 85 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 MIR1244-2-201ENST00000636449 85 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 MIR499B-201ENST00000636498 73 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 MIR1244-4-202ENST00000636813 85 ntBASIC-0.31□□□□□ -2.46
RPL28P46779 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 RNU6-626P-201ENST00000363354 107 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 RNU6-593P-201ENST00000364716 112 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 MIR214-201ENST00000385214 110 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 RNU6-913P-201ENST00000390913 95 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.32□□□□□ -2.46
RPL28P46779 SUMO1P3-201ENST00000439961 304 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 RNU7-165P-201ENST00000458864 60 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 AC104692.1-201ENST00000472406 90 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 PRDX4P1-201ENST00000507189 574 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 AC022441.3-201ENST00000605737 136 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 RNU1-29P-201ENST00000606574 126 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 AC092794.2-201ENST00000620933 563 ntBASIC-0.32□□□□□ -2.46
RPL28P46779 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 RNU4-75P-201ENST00000364621 146 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 MIR329-2-201ENST00000385029 84 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 SNORA75.4-201ENST00000391278 119 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 FCF1P9-201ENST00000412546 282 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 AC009161.1-201ENST00000417306 376 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 AF228730.4-201ENST00000421457 183 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 SNORD11-201ENST00000459124 84 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 MIR2053-201ENST00000459295 91 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 RPL39P34-201ENST00000477141 156 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 RNU7-25P-201ENST00000516544 62 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 RNU6-958P-201ENST00000516995 106 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 AP000942.4-201ENST00000604811 241 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 MIR548AY-201ENST00000617669 107 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 AC091304.10-201ENST00000641554 121 ntBASIC-0.33□□□□□ -2.46
RPL28P46779 RNU6-674P-201ENST00000363831 107 ntBASIC-0.34□□□□□ -2.46
RPL28P46779 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.34□□□□□ -2.46
RPL28P46779 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.34□□□□□ -2.46
RPL28P46779 RNU6-740P-201ENST00000364734 105 ntBASIC-0.34□□□□□ -2.46
RPL28P46779 RNU6-269P-201ENST00000391077 97 ntBASIC-0.34□□□□□ -2.46
RPL28P46779 RNU6-602P-201ENST00000411155 105 ntBASIC-0.34□□□□□ -2.46
RPL28P46779 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.34□□□□□ -2.46
RPL28P46779 SNORD4A-201ENST00000459174 72 ntBASIC-0.34□□□□□ -2.46
RPL28P46779 RNU7-159P-201ENST00000459284 62 ntBASIC-0.34□□□□□ -2.46
RPL28P46779 RNU6-135P-201ENST00000516769 101 ntBASIC-0.34□□□□□ -2.46
RPL28P46779 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.34□□□□□ -2.46
RPL28P46779 RNA5SP47-201ENST00000517230 109 ntBASIC-0.34□□□□□ -2.46
RPL28P46779 AC245008.1-201ENST00000608123 476 ntBASIC-0.34□□□□□ -2.46
RPL28P46779 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 RNU4-50P-201ENST00000364361 141 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 RNY3P4-201ENST00000384428 101 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 AL590004.1-201ENST00000405321 300 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 MIR548O-201ENST00000408583 114 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 MIR1278-201ENST00000408753 81 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 POLR2KP2-201ENST00000438155 177 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 RPL30P15-201ENST00000457129 321 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 RNU6-437P-201ENST00000459408 95 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 AC091951.2-201ENST00000500762 203 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 RNU6-470P-201ENST00000515954 104 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 RNU6-504P-201ENST00000516568 104 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 MIR4752-201ENST00000579672 72 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 AC005899.2-201ENST00000584353 90 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 AC087588.2-201ENST00000617667 426 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 AC078883.4-201ENST00000623218 367 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 MIR3974-201ENST00000637126 96 ntBASIC-0.35□□□□□ -2.47
RPL28P46779 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.36□□□□□ -2.47
RPL28P46779 RNA5SP257-201ENST00000363023 116 ntBASIC-0.36□□□□□ -2.47
RPL28P46779 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.36□□□□□ -2.47
RPL28P46779 SNORA69.1-201ENST00000390904 137 ntBASIC-0.36□□□□□ -2.47
RPL28P46779 RNU4-83P-201ENST00000410863 133 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms