Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.98□□□□□ -2.25
HMGCLP35914 FAM106DP-201ENST00000586416 501 ntBASIC0.98□□□□□ -2.25
HMGCLP35914 AC008737.2-201ENST00000599446 118 ntBASIC0.98□□□□□ -2.25
HMGCLP35914 AL391903.3-201ENST00000612158 163 ntBASIC0.98□□□□□ -2.25
HMGCLP35914 JPX_2.1-201ENST00000614161 69 ntBASIC0.98□□□□□ -2.25
HMGCLP35914 MIR8065-201ENST00000620577 100 ntBASIC0.98□□□□□ -2.25
HMGCLP35914 AC027335.2-201ENST00000624030 375 ntBASIC0.98□□□□□ -2.25
HMGCLP35914 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
HMGCLP35914 Y_RNA.44-201ENST00000362676 108 ntBASIC0.97□□□□□ -2.25
HMGCLP35914 Y_RNA.242-201ENST00000364473 110 ntBASIC0.97□□□□□ -2.25
HMGCLP35914 Y_RNA.363-201ENST00000365529 113 ntBASIC0.97□□□□□ -2.25
HMGCLP35914 RNU6-211P-201ENST00000384047 107 ntBASIC0.97□□□□□ -2.25
HMGCLP35914 RNU6-514P-201ENST00000384208 107 ntBASIC0.97□□□□□ -2.25
HMGCLP35914 Y_RNA.562-201ENST00000384695 113 ntBASIC0.97□□□□□ -2.25
HMGCLP35914 SNORD58.1-201ENST00000391313 66 ntBASIC0.97□□□□□ -2.25
HMGCLP35914 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.97□□□□□ -2.25
HMGCLP35914 RPS26P48-201ENST00000491713 339 ntBASIC0.97□□□□□ -2.25
HMGCLP35914 AL133373.1-201ENST00000497098 94 ntBASIC0.97□□□□□ -2.25
HMGCLP35914 RNU6-570P-201ENST00000517051 105 ntBASIC0.97□□□□□ -2.25
HMGCLP35914 MIR3192-201ENST00000584920 77 ntBASIC0.97□□□□□ -2.25
HMGCLP35914 AL360085.1-201ENST00000604713 532 ntBASIC0.97□□□□□ -2.25
HMGCLP35914 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.97□□□□□ -2.25
HMGCLP35914 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.97□□□□□ -2.25
HMGCLP35914 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HMGCLP35914 MIR337-201ENST00000362281 93 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 RNU6-1084P-201ENST00000362498 107 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 Y_RNA.176-201ENST00000363815 109 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 RNU1-124P-201ENST00000363861 145 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 RNU6-740P-201ENST00000364734 105 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 RNU6-442P-201ENST00000383968 104 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 RNU6-1289P-201ENST00000384431 106 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 MIR19B1-201ENST00000384829 87 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 SNORD72-201ENST00000390994 80 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 SNORD12-201ENST00000391002 90 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 MLLT10P1-201ENST00000418346 262 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 BTF3P11-201ENST00000426582 477 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 UBL5P1-201ENST00000507979 193 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 SNORA31.4-201ENST00000516049 129 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 SNORD77.4-201ENST00000516158 81 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 RNU7-43P-201ENST00000516554 64 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 RNA5SP404-201ENST00000517118 132 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 AC100767.1-201ENST00000528178 123 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.96□□□□□ -2.26
HMGCLP35914 AC011921.3-201ENST00000605540 361 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 uc_338.4-201ENST00000616635 176 ntBASIC0.96□□□□□ -2.26
HMGCLP35914 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
HMGCLP35914 Y_RNA.47-201ENST00000362697 108 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 SNORD14E-201ENST00000364009 85 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 RNU6-713P-201ENST00000384761 107 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 MIR626-201ENST00000385032 94 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 MIR568-201ENST00000385036 95 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
HMGCLP35914 RNU6-383P-201ENST00000410864 94 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 MTCYBP9-201ENST00000431021 303 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 SNORD123-201ENST00000459473 70 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 AC048334.1-201ENST00000477975 159 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 RNU2-13P-201ENST00000515909 113 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 RNU4-57P-201ENST00000515980 135 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 SNORD79.1-201ENST00000516069 84 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 Y_RNA.668-201ENST00000516233 93 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 RNU6-1007P-201ENST00000516586 107 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 AL022345.2-201ENST00000606307 135 ntBASIC0.95□□□□□ -2.26
HMGCLP35914 Y_RNA.122-201ENST00000363331 96 ntBASIC0.94□□□□□ -2.26
HMGCLP35914 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
HMGCLP35914 Y_RNA.396-201ENST00000383949 103 ntBASIC0.94□□□□□ -2.26
HMGCLP35914 Y_RNA.461-201ENST00000384263 103 ntBASIC0.94□□□□□ -2.26
HMGCLP35914 SNORA25-201ENST00000384384 134 ntBASIC0.94□□□□□ -2.26
HMGCLP35914 MIR222-201ENST00000384992 110 ntBASIC0.94□□□□□ -2.26
HMGCLP35914 MIR516B2-201ENST00000385190 85 ntBASIC0.94□□□□□ -2.26
HMGCLP35914 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.94□□□□□ -2.26
HMGCLP35914 MIR1302-6-201ENST00000408466 90 ntBASIC0.94□□□□□ -2.26
HMGCLP35914 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.94□□□□□ -2.26
HMGCLP35914 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.94□□□□□ -2.26
HMGCLP35914 SNORA31.2-201ENST00000516019 134 ntBASIC0.94□□□□□ -2.26
HMGCLP35914 SNORD111.1-201ENST00000516421 86 ntBASIC0.94□□□□□ -2.26
HMGCLP35914 MIR4724-201ENST00000579485 89 ntBASIC0.94□□□□□ -2.26
HMGCLP35914 MIR4781-201ENST00000585250 76 ntBASIC0.94□□□□□ -2.26
HMGCLP35914 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.94□□□□□ -2.26
HMGCLP35914 U6.104-201ENST00000637979 90 ntBASIC0.94□□□□□ -2.26
HMGCLP35914 AL391516.1-201ENST00000554380 2449 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 Y_RNA.117-201ENST00000363294 101 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 Y_RNA.149-201ENST00000363558 117 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 Y_RNA.304-201ENST00000365011 112 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 Y_RNA.352-201ENST00000365439 102 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 Y_RNA.587-201ENST00000391210 103 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 RNU6-651P-201ENST00000411040 105 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 MTND2P23-201ENST00000422990 651 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 SNORD127-201ENST00000458892 86 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
HMGCLP35914 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.93□□□□□ -2.26
HMGCLP35914 RNU6-327P-201ENST00000516270 127 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 SCARNA24.2-201ENST00000516968 130 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 MIR4643-201ENST00000577473 78 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 MIR4764-201ENST00000580680 88 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 AC012433.1-201ENST00000588916 398 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 MIR6857-201ENST00000613267 93 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 Y_RNA.802-201ENST00000614892 130 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 Pinc.1-201ENST00000616452 154 ntBASIC0.93□□□□□ -2.26
HMGCLP35914 SNORD38C-201ENST00000384381 69 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms