Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.45□□□□□ -2.34
RORAP35398 UBE2V2P2-201ENST00000587677 504 ntBASIC0.45□□□□□ -2.34
RORAP35398 AC005357.1-201ENST00000588399 301 ntBASIC0.45□□□□□ -2.34
RORAP35398 PART1_1.1-201ENST00000611761 217 ntBASIC0.45□□□□□ -2.34
RORAP35398 AC006441.5-201ENST00000612680 209 ntBASIC0.45□□□□□ -2.34
RORAP35398 RNU4-80P-201ENST00000363200 141 ntBASIC0.44□□□□□ -2.34
RORAP35398 Y_RNA.252-201ENST00000364556 101 ntBASIC0.44□□□□□ -2.34
RORAP35398 RNU6-580P-201ENST00000365159 107 ntBASIC0.44□□□□□ -2.34
RORAP35398 SNORA51.10-201ENST00000384418 136 ntBASIC0.44□□□□□ -2.34
RORAP35398 SNORA26.5-201ENST00000391215 123 ntBASIC0.44□□□□□ -2.34
RORAP35398 SNORA36B-201ENST00000410438 131 ntBASIC0.44□□□□□ -2.34
RORAP35398 FGF7P4-201ENST00000509595 295 ntBASIC0.44□□□□□ -2.34
RORAP35398 RPL23AP91-201ENST00000569211 455 ntBASIC0.44□□□□□ -2.34
RORAP35398 MIR4300-201ENST00000581016 96 ntBASIC0.44□□□□□ -2.34
RORAP35398 MIR4791-201ENST00000607666 84 ntBASIC0.44□□□□□ -2.34
RORAP35398 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.44□□□□□ -2.34
RORAP35398 AL606534.2-204ENST00000635008 178 ntBASIC0.44□□□□□ -2.34
RORAP35398 Y_RNA.143-201ENST00000363520 106 ntBASIC0.43□□□□□ -2.34
RORAP35398 Y_RNA.303-201ENST00000364998 94 ntBASIC0.43□□□□□ -2.34
RORAP35398 RNU1-115P-201ENST00000365329 160 ntBASIC0.43□□□□□ -2.34
RORAP35398 Y_RNA.384-201ENST00000383909 102 ntBASIC0.43□□□□□ -2.34
RORAP35398 SNORA72.4-201ENST00000384174 132 ntBASIC0.43□□□□□ -2.34
RORAP35398 Y_RNA.537-201ENST00000384626 109 ntBASIC0.43□□□□□ -2.34
RORAP35398 AC024067.1-201ENST00000426199 223 ntBASIC0.43□□□□□ -2.34
RORAP35398 AL160004.2-201ENST00000432935 350 ntBASIC0.43□□□□□ -2.34
RORAP35398 SNORA40.14-201ENST00000516543 86 ntBASIC0.43□□□□□ -2.34
RORAP35398 AC104695.3-201ENST00000604052 296 ntBASIC0.43□□□□□ -2.34
RORAP35398 AC015726.2-201ENST00000620112 122 ntBASIC0.43□□□□□ -2.34
RORAP35398 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
RORAP35398 AC010487.4-201ENST00000637027 61 ntBASIC0.43□□□□□ -2.34
RORAP35398 MIR1-1-201ENST00000362147 71 ntBASIC0.42□□□□□ -2.34
RORAP35398 Y_RNA.205-201ENST00000364128 113 ntBASIC0.42□□□□□ -2.34
RORAP35398 RNU6-396P-201ENST00000365369 105 ntBASIC0.42□□□□□ -2.34
RORAP35398 Y_RNA.383-201ENST00000383855 97 ntBASIC0.42□□□□□ -2.34
RORAP35398 RNU6-125P-201ENST00000384505 107 ntBASIC0.42□□□□□ -2.34
RORAP35398 RNA5SP222-201ENST00000411039 105 ntBASIC0.42□□□□□ -2.34
RORAP35398 AC090844.1-201ENST00000422019 156 ntBASIC0.42□□□□□ -2.34
RORAP35398 AL080274.1-201ENST00000605565 220 ntBASIC0.42□□□□□ -2.34
RORAP35398 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
RORAP35398 MIR377-201ENST00000362145 69 ntBASIC0.41□□□□□ -2.34
RORAP35398 Y_RNA.39-201ENST00000362620 98 ntBASIC0.41□□□□□ -2.34
RORAP35398 Y_RNA.70-201ENST00000362886 110 ntBASIC0.41□□□□□ -2.34
RORAP35398 Y_RNA.315-201ENST00000365117 102 ntBASIC0.41□□□□□ -2.34
RORAP35398 SNORA36.2-201ENST00000384004 127 ntBASIC0.41□□□□□ -2.34
RORAP35398 Y_RNA.418-201ENST00000384029 102 ntBASIC0.41□□□□□ -2.34
RORAP35398 Y_RNA.439-201ENST00000384119 94 ntBASIC0.41□□□□□ -2.34
RORAP35398 RNU6-1237P-201ENST00000384777 107 ntBASIC0.41□□□□□ -2.34
RORAP35398 MIR193B-201ENST00000384907 83 ntBASIC0.41□□□□□ -2.34
RORAP35398 MT-TN-201ENST00000387400 73 ntBASIC0.41□□□□□ -2.34
RORAP35398 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.41□□□□□ -2.34
RORAP35398 RNU6-177P-201ENST00000411257 104 ntBASIC0.41□□□□□ -2.34
RORAP35398 AC015818.7-201ENST00000428754 109 ntBASIC0.41□□□□□ -2.34
RORAP35398 AC087499.7-201ENST00000441958 109 ntBASIC0.41□□□□□ -2.34
RORAP35398 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.41□□□□□ -2.34
RORAP35398 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.41□□□□□ -2.34
RORAP35398 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.41□□□□□ -2.34
RORAP35398 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
RORAP35398 SNORA72.1-201ENST00000363485 129 ntBASIC0.4□□□□□ -2.35
RORAP35398 Y_RNA.494-201ENST00000384432 111 ntBASIC0.4□□□□□ -2.35
RORAP35398 Y_RNA.529-201ENST00000384586 119 ntBASIC0.4□□□□□ -2.35
RORAP35398 MIR573-201ENST00000384964 99 ntBASIC0.4□□□□□ -2.35
RORAP35398 RNU6-205P-201ENST00000390858 107 ntBASIC0.4□□□□□ -2.35
RORAP35398 MTCO2P12-201ENST00000427426 682 ntBASIC0.4□□□□□ -2.35
RORAP35398 MIR2681-201ENST00000581814 105 ntBASIC0.4□□□□□ -2.35
RORAP35398 RPS29P30-201ENST00000600975 111 ntBASIC0.4□□□□□ -2.35
RORAP35398 Y_RNA.222-201ENST00000364264 102 ntBASIC0.39□□□□□ -2.35
RORAP35398 VTRNA1-3-201ENST00000365645 89 ntBASIC0.39□□□□□ -2.35
RORAP35398 RNU6-21P-201ENST00000384710 107 ntBASIC0.39□□□□□ -2.35
RORAP35398 U8.20-201ENST00000459445 131 ntBASIC0.39□□□□□ -2.35
RORAP35398 RNU6-191P-201ENST00000516295 94 ntBASIC0.39□□□□□ -2.35
RORAP35398 RNU6-875P-201ENST00000516488 106 ntBASIC0.39□□□□□ -2.35
RORAP35398 RNU7-25P-201ENST00000516544 62 ntBASIC0.39□□□□□ -2.35
RORAP35398 uc_338.6-201ENST00000613544 171 ntBASIC0.39□□□□□ -2.35
RORAP35398 AC243994.1-201ENST00000618627 109 ntBASIC0.39□□□□□ -2.35
RORAP35398 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.39□□□□□ -2.35
RORAP35398 RNY3-201ENST00000365484 102 ntBASIC0.38□□□□□ -2.35
RORAP35398 Y_RNA.376-201ENST00000365638 108 ntBASIC0.38□□□□□ -2.35
RORAP35398 RNU6-102P-201ENST00000384485 104 ntBASIC0.38□□□□□ -2.35
RORAP35398 SNORD83.1-201ENST00000411362 77 ntBASIC0.38□□□□□ -2.35
RORAP35398 AC244023.1-201ENST00000426884 112 ntBASIC0.38□□□□□ -2.35
RORAP35398 POLR2KP2-201ENST00000438155 177 ntBASIC0.38□□□□□ -2.35
RORAP35398 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.38□□□□□ -2.35
RORAP35398 SNORA68.3-201ENST00000515906 83 ntBASIC0.38□□□□□ -2.35
RORAP35398 RNU6-1046P-201ENST00000516538 107 ntBASIC0.38□□□□□ -2.35
RORAP35398 AC040926.1-201ENST00000530195 238 ntBASIC0.38□□□□□ -2.35
RORAP35398 MIR1273G-201ENST00000577677 100 ntBASIC0.38□□□□□ -2.35
RORAP35398 AC242498.1-201ENST00000604134 111 ntBASIC0.38□□□□□ -2.35
RORAP35398 LARP7P1-201ENST00000605576 316 ntBASIC0.38□□□□□ -2.35
RORAP35398 AL021707.8-201ENST00000609428 183 ntBASIC0.38□□□□□ -2.35
RORAP35398 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.38□□□□□ -2.35
RORAP35398 AL138825.1-201ENST00000618587 192 ntBASIC0.38□□□□□ -2.35
RORAP35398 AC022140.2-201ENST00000623500 188 ntBASIC0.38□□□□□ -2.35
RORAP35398 Y_RNA.58-201ENST00000362807 102 ntBASIC0.37□□□□□ -2.35
RORAP35398 Y_RNA.154-201ENST00000363624 102 ntBASIC0.37□□□□□ -2.35
RORAP35398 RNY3P1-201ENST00000365085 102 ntBASIC0.37□□□□□ -2.35
RORAP35398 SNORA1.2-201ENST00000365189 134 ntBASIC0.37□□□□□ -2.35
RORAP35398 SNORA24-201ENST00000384096 131 ntBASIC0.37□□□□□ -2.35
RORAP35398 Y_RNA.471-201ENST00000384312 102 ntBASIC0.37□□□□□ -2.35
RORAP35398 Y_RNA.547-201ENST00000384654 119 ntBASIC0.37□□□□□ -2.35
RORAP35398 MIR140-201ENST00000385282 100 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms