Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.6□□□□□ -2.31
RFC4P35249 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.6□□□□□ -2.31
RFC4P35249 MIR2909-201ENST00000617113 69 ntBASIC0.6□□□□□ -2.31
RFC4P35249 RNU4-80P-201ENST00000363200 141 ntBASIC0.59□□□□□ -2.31
RFC4P35249 RNA5SP62-201ENST00000363457 110 ntBASIC0.59□□□□□ -2.31
RFC4P35249 RNU6-268P-201ENST00000364174 107 ntBASIC0.59□□□□□ -2.31
RFC4P35249 RNU1-115P-201ENST00000365329 160 ntBASIC0.59□□□□□ -2.31
RFC4P35249 Y_RNA.383-201ENST00000383855 97 ntBASIC0.59□□□□□ -2.31
RFC4P35249 RNU6-442P-201ENST00000383968 104 ntBASIC0.59□□□□□ -2.31
RFC4P35249 Y_RNA.579-201ENST00000390939 94 ntBASIC0.59□□□□□ -2.31
RFC4P35249 SNORD72-201ENST00000390994 80 ntBASIC0.59□□□□□ -2.31
RFC4P35249 SNORA36B-201ENST00000410438 131 ntBASIC0.59□□□□□ -2.31
RFC4P35249 RNU2-70P-201ENST00000410718 179 ntBASIC0.59□□□□□ -2.31
RFC4P35249 RNU6-130P-201ENST00000411112 103 ntBASIC0.59□□□□□ -2.31
RFC4P35249 AC236972.2-201ENST00000434979 310 ntBASIC0.59□□□□□ -2.31
RFC4P35249 SNRPGP14-201ENST00000435400 219 ntBASIC0.59□□□□□ -2.31
RFC4P35249 U7.7-201ENST00000459276 60 ntBASIC0.59□□□□□ -2.31
RFC4P35249 RNU7-141P-201ENST00000459304 62 ntBASIC0.59□□□□□ -2.31
RFC4P35249 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.59□□□□□ -2.31
RFC4P35249 AC113410.1-201ENST00000505029 247 ntBASIC0.59□□□□□ -2.31
RFC4P35249 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
RFC4P35249 RNU7-181P-201ENST00000517234 74 ntBASIC0.59□□□□□ -2.31
RFC4P35249 RPL23AP91-201ENST00000569211 455 ntBASIC0.59□□□□□ -2.31
RFC4P35249 Pinc.1-201ENST00000616452 154 ntBASIC0.59□□□□□ -2.31
RFC4P35249 AC007485.1-201ENST00000616755 206 ntBASIC0.59□□□□□ -2.31
RFC4P35249 RNU6-801P-201ENST00000364087 105 ntBASIC0.58□□□□□ -2.32
RFC4P35249 SNORD63-201ENST00000384262 68 ntBASIC0.58□□□□□ -2.32
RFC4P35249 SNORA2B-201ENST00000384583 137 ntBASIC0.58□□□□□ -2.32
RFC4P35249 RNU6-1009P-201ENST00000390996 107 ntBASIC0.58□□□□□ -2.32
RFC4P35249 U8.17-201ENST00000391292 132 ntBASIC0.58□□□□□ -2.32
RFC4P35249 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.58□□□□□ -2.32
RFC4P35249 RNU6-994P-201ENST00000410507 111 ntBASIC0.58□□□□□ -2.32
RFC4P35249 RNU6-437P-201ENST00000459408 95 ntBASIC0.58□□□□□ -2.32
RFC4P35249 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.58□□□□□ -2.32
RFC4P35249 RNU6-976P-201ENST00000516086 111 ntBASIC0.58□□□□□ -2.32
RFC4P35249 RNU6-1046P-201ENST00000516538 107 ntBASIC0.58□□□□□ -2.32
RFC4P35249 Z83818.1-201ENST00000603584 150 ntBASIC0.58□□□□□ -2.32
RFC4P35249 AL080274.1-201ENST00000605565 220 ntBASIC0.58□□□□□ -2.32
RFC4P35249 AL138825.1-201ENST00000618587 192 ntBASIC0.58□□□□□ -2.32
RFC4P35249 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
RFC4P35249 SNORD113.3-201ENST00000364630 78 ntBASIC0.57□□□□□ -2.32
RFC4P35249 Y_RNA.263-201ENST00000364659 114 ntBASIC0.57□□□□□ -2.32
RFC4P35249 MTCO2P33-201ENST00000402100 465 ntBASIC0.57□□□□□ -2.32
RFC4P35249 AL603910.2-201ENST00000407268 136 ntBASIC0.57□□□□□ -2.32
RFC4P35249 SNORD111-201ENST00000408139 94 ntBASIC0.57□□□□□ -2.32
RFC4P35249 POLR2KP2-201ENST00000438155 177 ntBASIC0.57□□□□□ -2.32
RFC4P35249 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.57□□□□□ -2.32
RFC4P35249 RNU11-2P-201ENST00000516898 142 ntBASIC0.57□□□□□ -2.32
RFC4P35249 AC040926.1-201ENST00000530195 238 ntBASIC0.57□□□□□ -2.32
RFC4P35249 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.57□□□□□ -2.32
RFC4P35249 AC008507.4-201ENST00000585464 127 ntBASIC0.57□□□□□ -2.32
RFC4P35249 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
RFC4P35249 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.57□□□□□ -2.32
RFC4P35249 SNORA26.5-201ENST00000391215 123 ntBASIC0.56□□□□□ -2.32
RFC4P35249 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
RFC4P35249 AC067940.1-201ENST00000458411 300 ntBASIC0.56□□□□□ -2.32
RFC4P35249 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
RFC4P35249 MIR548AO-201ENST00000579992 96 ntBASIC0.56□□□□□ -2.32
RFC4P35249 MIR4300-201ENST00000581016 96 ntBASIC0.56□□□□□ -2.32
RFC4P35249 MIR4514-201ENST00000581410 57 ntBASIC0.56□□□□□ -2.32
RFC4P35249 AC025627.3-201ENST00000582078 182 ntBASIC0.56□□□□□ -2.32
RFC4P35249 MIR4795-201ENST00000584182 89 ntBASIC0.56□□□□□ -2.32
RFC4P35249 AC087685.1-201ENST00000587507 141 ntBASIC0.56□□□□□ -2.32
RFC4P35249 AC015726.2-201ENST00000620112 122 ntBASIC0.56□□□□□ -2.32
RFC4P35249 RNU4-50P-201ENST00000364361 141 ntBASIC0.55□□□□□ -2.32
RFC4P35249 SNORA72.4-201ENST00000384174 132 ntBASIC0.55□□□□□ -2.32
RFC4P35249 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.55□□□□□ -2.32
RFC4P35249 MTND5P20-201ENST00000448677 143 ntBASIC0.55□□□□□ -2.32
RFC4P35249 AC098869.1-201ENST00000481627 292 ntBASIC0.55□□□□□ -2.32
RFC4P35249 SEPT14P8-201ENST00000508026 178 ntBASIC0.55□□□□□ -2.32
RFC4P35249 RNU6-830P-201ENST00000516353 107 ntBASIC0.55□□□□□ -2.32
RFC4P35249 RNU6-1110P-201ENST00000516462 101 ntBASIC0.55□□□□□ -2.32
RFC4P35249 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.55□□□□□ -2.32
RFC4P35249 MIR2681-201ENST00000581814 105 ntBASIC0.55□□□□□ -2.32
RFC4P35249 AC005357.1-201ENST00000588399 301 ntBASIC0.55□□□□□ -2.32
RFC4P35249 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
RFC4P35249 Y_RNA.197-201ENST00000364004 102 ntBASIC0.54□□□□□ -2.32
RFC4P35249 SNORA51.10-201ENST00000384418 136 ntBASIC0.54□□□□□ -2.32
RFC4P35249 SNORA62.5-201ENST00000516634 120 ntBASIC0.54□□□□□ -2.32
RFC4P35249 Y_RNA.702-201ENST00000516843 96 ntBASIC0.54□□□□□ -2.32
RFC4P35249 AC011195.1-201ENST00000578177 177 ntBASIC0.54□□□□□ -2.32
RFC4P35249 MIR548S-201ENST00000581352 82 ntBASIC0.54□□□□□ -2.32
RFC4P35249 SNORD113-5-201ENST00000607261 78 ntBASIC0.54□□□□□ -2.32
RFC4P35249 MIR4791-201ENST00000607666 84 ntBASIC0.54□□□□□ -2.32
RFC4P35249 MTND1P7-201ENST00000632801 297 ntBASIC0.54□□□□□ -2.32
RFC4P35249 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
RFC4P35249 RNU4-73P-201ENST00000363164 141 ntBASIC0.53□□□□□ -2.32
RFC4P35249 SNORD113-8-201ENST00000363497 74 ntBASIC0.53□□□□□ -2.32
RFC4P35249 RNU6-674P-201ENST00000363831 107 ntBASIC0.53□□□□□ -2.32
RFC4P35249 Y_RNA.370-201ENST00000365589 108 ntBASIC0.53□□□□□ -2.32
RFC4P35249 Y_RNA.526-201ENST00000384572 110 ntBASIC0.53□□□□□ -2.32
RFC4P35249 RNU6-1067P-201ENST00000384752 107 ntBASIC0.53□□□□□ -2.32
RFC4P35249 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.53□□□□□ -2.32
RFC4P35249 Y_RNA.602-201ENST00000410535 92 ntBASIC0.53□□□□□ -2.32
RFC4P35249 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.53□□□□□ -2.32
RFC4P35249 SNORD11-201ENST00000459124 84 ntBASIC0.53□□□□□ -2.32
RFC4P35249 RNU6-397P-201ENST00000516226 104 ntBASIC0.53□□□□□ -2.32
RFC4P35249 RNU6-191P-201ENST00000516295 94 ntBASIC0.53□□□□□ -2.32
RFC4P35249 Y_RNA.713-201ENST00000517013 96 ntBASIC0.53□□□□□ -2.32
RFC4P35249 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms