Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 U8.9-201ENST00000365667 134 ntBASIC3□□□□□ -1.93
RFX1P22670 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3□□□□□ -1.93
RFX1P22670 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
RFX1P22670 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RFX1P22670 MIR452-201ENST00000385020 85 ntBASIC2.99□□□□□ -1.93
RFX1P22670 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.99□□□□□ -1.93
RFX1P22670 AC099513.1-201ENST00000490423 301 ntBASIC2.99□□□□□ -1.93
RFX1P22670 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.99□□□□□ -1.93
RFX1P22670 AL137067.1-201ENST00000615933 120 ntBASIC2.99□□□□□ -1.93
RFX1P22670 MTND5P18-201ENST00000445624 1801 ntBASIC2.98□□□□□ -1.93
RFX1P22670 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RFX1P22670 MIR524-201ENST00000385242 87 ntBASIC2.98□□□□□ -1.93
RFX1P22670 MIR548A3-201ENST00000385297 97 ntBASIC2.98□□□□□ -1.93
RFX1P22670 RNY4P18-201ENST00000391107 89 ntBASIC2.98□□□□□ -1.93
RFX1P22670 MIR1263-201ENST00000408324 86 ntBASIC2.98□□□□□ -1.93
RFX1P22670 PGBD4P5-201ENST00000445958 426 ntBASIC2.98□□□□□ -1.93
RFX1P22670 RNU6-237P-201ENST00000515985 71 ntBASIC2.98□□□□□ -1.93
RFX1P22670 SNORA18.7-201ENST00000516910 131 ntBASIC2.98□□□□□ -1.93
RFX1P22670 RNU7-70P-201ENST00000516941 66 ntBASIC2.98□□□□□ -1.93
RFX1P22670 Y_RNA.709-201ENST00000516952 92 ntBASIC2.98□□□□□ -1.93
RFX1P22670 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RFX1P22670 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RFX1P22670 U8.2-201ENST00000363156 134 ntBASIC2.97□□□□□ -1.93
RFX1P22670 SNORA25.6-201ENST00000364121 118 ntBASIC2.97□□□□□ -1.93
RFX1P22670 Y_RNA.351-201ENST00000365436 96 ntBASIC2.97□□□□□ -1.93
RFX1P22670 Y_RNA.366-201ENST00000365540 102 ntBASIC2.97□□□□□ -1.93
RFX1P22670 MIR660-201ENST00000385235 97 ntBASIC2.97□□□□□ -1.93
RFX1P22670 MIR887-201ENST00000401258 79 ntBASIC2.97□□□□□ -1.93
RFX1P22670 RNU7-34P-201ENST00000459394 64 ntBASIC2.97□□□□□ -1.93
RFX1P22670 RNU7-80P-201ENST00000459562 61 ntBASIC2.97□□□□□ -1.93
RFX1P22670 AC055731.1-201ENST00000474387 401 ntBASIC2.97□□□□□ -1.93
RFX1P22670 RNU6-589P-201ENST00000516485 107 ntBASIC2.97□□□□□ -1.93
RFX1P22670 MIR4524B-201ENST00000581569 115 ntBASIC2.97□□□□□ -1.93
RFX1P22670 AL121890.5-201ENST00000620848 304 ntBASIC2.97□□□□□ -1.93
RFX1P22670 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
RFX1P22670 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RFX1P22670 MIR504-201ENST00000385065 83 ntBASIC2.96□□□□□ -1.94
RFX1P22670 RNA5SP136-201ENST00000410906 107 ntBASIC2.96□□□□□ -1.94
RFX1P22670 SUMO1P4-201ENST00000429430 302 ntBASIC2.96□□□□□ -1.94
RFX1P22670 AL513328.1-201ENST00000446460 224 ntBASIC2.96□□□□□ -1.94
RFX1P22670 AC002984.1-201ENST00000591692 448 ntBASIC2.96□□□□□ -1.94
RFX1P22670 AL590808.1-201ENST00000618696 141 ntBASIC2.96□□□□□ -1.94
RFX1P22670 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RFX1P22670 MIR424-201ENST00000362227 98 ntBASIC2.95□□□□□ -1.94
RFX1P22670 RNU1-133P-201ENST00000364867 167 ntBASIC2.95□□□□□ -1.94
RFX1P22670 Y_RNA.454-201ENST00000384224 113 ntBASIC2.95□□□□□ -1.94
RFX1P22670 Y_RNA.528-201ENST00000384575 108 ntBASIC2.95□□□□□ -1.94
RFX1P22670 SNORD23.1-201ENST00000408212 104 ntBASIC2.95□□□□□ -1.94
RFX1P22670 Y_RNA.649-201ENST00000459077 103 ntBASIC2.95□□□□□ -1.94
RFX1P22670 RNU6-240P-201ENST00000516098 97 ntBASIC2.95□□□□□ -1.94
RFX1P22670 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX1P22670 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
RFX1P22670 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RFX1P22670 RNU6-349P-201ENST00000362402 107 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-34-201ENST00000362441 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-12-201ENST00000362583 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-29-201ENST00000362834 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-9-201ENST00000362912 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-21-201ENST00000362963 81 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-14-201ENST00000363090 81 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-13-201ENST00000363358 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-41-201ENST00000363608 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-11-201ENST00000363616 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-5-201ENST00000363633 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-39-201ENST00000363694 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-4-201ENST00000363810 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-16-201ENST00000363887 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-6-201ENST00000363942 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-42-201ENST00000364273 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-15-201ENST00000364809 81 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-1-201ENST00000364961 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-26-201ENST00000365067 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-10-201ENST00000365073 81 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-43-201ENST00000365503 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-36-201ENST00000365629 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 RNA5SP21-201ENST00000410917 96 ntBASIC2.94□□□□□ -1.94
RFX1P22670 AC093850.1-201ENST00000454121 251 ntBASIC2.94□□□□□ -1.94
RFX1P22670 snoU13.26-201ENST00000459452 105 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORA31.17-201ENST00000516953 127 ntBASIC2.94□□□□□ -1.94
RFX1P22670 IGLV3-17-201ENST00000519099 244 ntBASIC2.94□□□□□ -1.94
RFX1P22670 MIR4778-201ENST00000577635 80 ntBASIC2.94□□□□□ -1.94
RFX1P22670 SNORD115-40-201ENST00000606510 82 ntBASIC2.94□□□□□ -1.94
RFX1P22670 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RFX1P22670 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RFX1P22670 AC008555.8-201ENST00000623602 2168 ntBASIC2.93□□□□□ -1.94
RFX1P22670 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RFX1P22670 SNORA63.4-201ENST00000362763 126 ntBASIC2.93□□□□□ -1.94
RFX1P22670 SNORA27-201ENST00000384323 126 ntBASIC2.93□□□□□ -1.94
RFX1P22670 SNORD116-21-201ENST00000384507 92 ntBASIC2.93□□□□□ -1.94
RFX1P22670 MIR136-201ENST00000385207 82 ntBASIC2.93□□□□□ -1.94
RFX1P22670 RNA5SP212-201ENST00000391223 107 ntBASIC2.93□□□□□ -1.94
RFX1P22670 U8.17-201ENST00000391292 132 ntBASIC2.93□□□□□ -1.94
RFX1P22670 RNA5SP24-201ENST00000516478 95 ntBASIC2.93□□□□□ -1.94
RFX1P22670 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.93□□□□□ -1.94
RFX1P22670 AC064859.1-201ENST00000624741 174 ntBASIC2.93□□□□□ -1.94
RFX1P22670 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
RFX1P22670 Y_RNA.241-201ENST00000364470 117 ntBASIC2.92□□□□□ -1.94
RFX1P22670 SNORA1.2-201ENST00000365189 134 ntBASIC2.92□□□□□ -1.94
RFX1P22670 RNU6-690P-201ENST00000365242 106 ntBASIC2.92□□□□□ -1.94
RFX1P22670 AL138827.1-201ENST00000402666 306 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms