Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RNU2-14P-201ENST00000411053 191 ntBASIC1.06□□□□□ -2.24
CAPN3P20807 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.06□□□□□ -2.24
CAPN3P20807 AC010655.3-201ENST00000478818 450 ntBASIC1.06□□□□□ -2.24
CAPN3P20807 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.06□□□□□ -2.24
CAPN3P20807 RNU2-31P-201ENST00000516954 155 ntBASIC1.06□□□□□ -2.24
CAPN3P20807 MIR5000-201ENST00000577717 103 ntBASIC1.06□□□□□ -2.24
CAPN3P20807 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
CAPN3P20807 SNORA25.3-201ENST00000363205 127 ntBASIC1.05□□□□□ -2.24
CAPN3P20807 RNU6-268P-201ENST00000364174 107 ntBASIC1.05□□□□□ -2.24
CAPN3P20807 RNU1-36P-201ENST00000365130 165 ntBASIC1.05□□□□□ -2.24
CAPN3P20807 Y_RNA.455-201ENST00000384230 98 ntBASIC1.05□□□□□ -2.24
CAPN3P20807 RNU6-474P-201ENST00000384243 107 ntBASIC1.05□□□□□ -2.24
CAPN3P20807 RNU2-64P-201ENST00000411315 191 ntBASIC1.05□□□□□ -2.24
CAPN3P20807 MTCO2P12-201ENST00000427426 682 ntBASIC1.05□□□□□ -2.24
CAPN3P20807 MTCO1P5-201ENST00000433573 344 ntBASIC1.05□□□□□ -2.24
CAPN3P20807 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.05□□□□□ -2.24
CAPN3P20807 AC067940.1-201ENST00000458411 300 ntBASIC1.05□□□□□ -2.24
CAPN3P20807 AP003716.2-201ENST00000528260 108 ntBASIC1.05□□□□□ -2.24
CAPN3P20807 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.05□□□□□ -2.24
CAPN3P20807 AC006441.5-201ENST00000612680 209 ntBASIC1.05□□□□□ -2.24
CAPN3P20807 AC134026.1-201ENST00000623249 2239 ntBASIC1.05□□□□□ -2.24
CAPN3P20807 MIR367-201ENST00000362299 68 ntBASIC1.04□□□□□ -2.24
CAPN3P20807 RNU6-326P-201ENST00000365480 107 ntBASIC1.04□□□□□ -2.24
CAPN3P20807 RNU6-102P-201ENST00000384485 104 ntBASIC1.04□□□□□ -2.24
CAPN3P20807 MIR216A-201ENST00000385063 110 ntBASIC1.04□□□□□ -2.24
CAPN3P20807 RNA5SP496-201ENST00000391240 109 ntBASIC1.04□□□□□ -2.24
CAPN3P20807 U8.17-201ENST00000391292 132 ntBASIC1.04□□□□□ -2.24
CAPN3P20807 RPS3AP1-201ENST00000413190 320 ntBASIC1.04□□□□□ -2.24
CAPN3P20807 RPS29P28-201ENST00000446439 141 ntBASIC1.04□□□□□ -2.24
CAPN3P20807 snoU13.25-201ENST00000458945 104 ntBASIC1.04□□□□□ -2.24
CAPN3P20807 SNORD11-201ENST00000459124 84 ntBASIC1.04□□□□□ -2.24
CAPN3P20807 AC015726.2-201ENST00000620112 122 ntBASIC1.04□□□□□ -2.24
CAPN3P20807 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
CAPN3P20807 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
CAPN3P20807 SNRPGP14-201ENST00000435400 219 ntBASIC1.03□□□□□ -2.24
CAPN3P20807 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.03□□□□□ -2.24
CAPN3P20807 MRPS35P2-201ENST00000508242 191 ntBASIC1.03□□□□□ -2.24
CAPN3P20807 Y_RNA.711-201ENST00000516993 102 ntBASIC1.03□□□□□ -2.24
CAPN3P20807 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.03□□□□□ -2.24
CAPN3P20807 AC013791.1-201ENST00000616619 62 ntBASIC1.03□□□□□ -2.24
CAPN3P20807 RNU6-770P-201ENST00000363929 105 ntBASIC1.02□□□□□ -2.25
CAPN3P20807 SNORA22B-201ENST00000383876 138 ntBASIC1.02□□□□□ -2.25
CAPN3P20807 RNY1P4-201ENST00000384595 115 ntBASIC1.02□□□□□ -2.25
CAPN3P20807 Y_RNA.537-201ENST00000384626 109 ntBASIC1.02□□□□□ -2.25
CAPN3P20807 RNU6-763P-201ENST00000390865 106 ntBASIC1.02□□□□□ -2.25
CAPN3P20807 MIR1185-1-201ENST00000408598 86 ntBASIC1.02□□□□□ -2.25
CAPN3P20807 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.02□□□□□ -2.25
CAPN3P20807 RN7SKP164-201ENST00000516138 266 ntBASIC1.02□□□□□ -2.25
CAPN3P20807 RNY3P15-201ENST00000516297 97 ntBASIC1.02□□□□□ -2.25
CAPN3P20807 RNU6-126P-201ENST00000516685 103 ntBASIC1.02□□□□□ -2.25
CAPN3P20807 AC131281.1-201ENST00000522984 164 ntBASIC1.02□□□□□ -2.25
CAPN3P20807 MIR548AR-201ENST00000582191 57 ntBASIC1.02□□□□□ -2.25
CAPN3P20807 AL136317.1-201ENST00000612653 226 ntBASIC1.02□□□□□ -2.25
CAPN3P20807 Y_RNA.202-201ENST00000364083 110 ntBASIC1.01□□□□□ -2.25
CAPN3P20807 SNORA51.10-201ENST00000384418 136 ntBASIC1.01□□□□□ -2.25
CAPN3P20807 SNORD111-201ENST00000408139 94 ntBASIC1.01□□□□□ -2.25
CAPN3P20807 MIR1278-201ENST00000408753 81 ntBASIC1.01□□□□□ -2.25
CAPN3P20807 AC107297.1-201ENST00000459991 176 ntBASIC1.01□□□□□ -2.25
CAPN3P20807 MIR2115-201ENST00000516657 100 ntBASIC1.01□□□□□ -2.25
CAPN3P20807 MIR4724-201ENST00000579485 89 ntBASIC1.01□□□□□ -2.25
CAPN3P20807 AC025627.3-201ENST00000582078 182 ntBASIC1.01□□□□□ -2.25
CAPN3P20807 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
CAPN3P20807 AL020996.3-201ENST00000606617 222 ntBASIC1.01□□□□□ -2.25
CAPN3P20807 MIR6767-201ENST00000637302 66 ntBASIC1.01□□□□□ -2.25
CAPN3P20807 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1□□□□□ -2.25
CAPN3P20807 MTND4P29-201ENST00000503122 1372 ntBASIC1□□□□□ -2.25
CAPN3P20807 Y_RNA.19-201ENST00000362462 99 ntBASIC1□□□□□ -2.25
CAPN3P20807 RNU6-797P-201ENST00000363101 109 ntBASIC1□□□□□ -2.25
CAPN3P20807 SNORD72-201ENST00000390994 80 ntBASIC1□□□□□ -2.25
CAPN3P20807 RNU6-994P-201ENST00000410507 111 ntBASIC1□□□□□ -2.25
CAPN3P20807 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1□□□□□ -2.25
CAPN3P20807 RNA5SP255-201ENST00000516370 107 ntBASIC1□□□□□ -2.25
CAPN3P20807 AC109810.1-201ENST00000534066 224 ntBASIC1□□□□□ -2.25
CAPN3P20807 MIR4662B-201ENST00000579498 81 ntBASIC1□□□□□ -2.25
CAPN3P20807 AC131055.1-201ENST00000584626 316 ntBASIC1□□□□□ -2.25
CAPN3P20807 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
CAPN3P20807 RNU6-1272P-201ENST00000362776 107 ntBASIC0.99□□□□□ -2.25
CAPN3P20807 RNU6-847P-201ENST00000411115 108 ntBASIC0.99□□□□□ -2.25
CAPN3P20807 AC023827.1-201ENST00000569247 97 ntBASIC0.99□□□□□ -2.25
CAPN3P20807 MIR5692C2-201ENST00000577959 77 ntBASIC0.99□□□□□ -2.25
CAPN3P20807 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
CAPN3P20807 MIR6857-201ENST00000613267 93 ntBASIC0.99□□□□□ -2.25
CAPN3P20807 uc_338.4-201ENST00000616635 176 ntBASIC0.99□□□□□ -2.25
CAPN3P20807 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.99□□□□□ -2.25
CAPN3P20807 Y_RNA.210-201ENST00000364161 110 ntBASIC0.98□□□□□ -2.25
CAPN3P20807 RNU6-1187P-201ENST00000364771 110 ntBASIC0.98□□□□□ -2.25
CAPN3P20807 Y_RNA.293-201ENST00000364908 93 ntBASIC0.98□□□□□ -2.25
CAPN3P20807 RNU6-396P-201ENST00000365369 105 ntBASIC0.98□□□□□ -2.25
CAPN3P20807 SNORD28B-201ENST00000390993 75 ntBASIC0.98□□□□□ -2.25
CAPN3P20807 AC113618.1-201ENST00000416747 285 ntBASIC0.98□□□□□ -2.25
CAPN3P20807 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.98□□□□□ -2.25
CAPN3P20807 U7.7-201ENST00000459276 60 ntBASIC0.98□□□□□ -2.25
CAPN3P20807 AC113195.1-201ENST00000579952 141 ntBASIC0.98□□□□□ -2.25
CAPN3P20807 MIR5688-201ENST00000580619 83 ntBASIC0.98□□□□□ -2.25
CAPN3P20807 MIR3171-201ENST00000584270 74 ntBASIC0.98□□□□□ -2.25
CAPN3P20807 AC106800.4-201ENST00000614905 153 ntBASIC0.98□□□□□ -2.25
CAPN3P20807 RNA5SP457-201ENST00000363657 124 ntBASIC0.97□□□□□ -2.25
CAPN3P20807 SNORD113.3-201ENST00000364630 78 ntBASIC0.97□□□□□ -2.25
CAPN3P20807 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
CAPN3P20807 AL603910.2-201ENST00000407268 136 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms