Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.32□□□□□ -2.2
ACTN1P12814 AC090142.3-201ENST00000519012 385 ntBASIC1.32□□□□□ -2.2
ACTN1P12814 AL117187.1-201ENST00000555482 181 ntBASIC1.32□□□□□ -2.2
ACTN1P12814 AC019288.1-201ENST00000557918 224 ntBASIC1.32□□□□□ -2.2
ACTN1P12814 MIR2681-201ENST00000581814 105 ntBASIC1.32□□□□□ -2.2
ACTN1P12814 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
ACTN1P12814 MIR367-201ENST00000362299 68 ntBASIC1.31□□□□□ -2.2
ACTN1P12814 Y_RNA.47-201ENST00000362697 108 ntBASIC1.31□□□□□ -2.2
ACTN1P12814 RNU6-674P-201ENST00000363831 107 ntBASIC1.31□□□□□ -2.2
ACTN1P12814 Y_RNA.336-201ENST00000365307 109 ntBASIC1.31□□□□□ -2.2
ACTN1P12814 RNU6-969P-201ENST00000383900 105 ntBASIC1.31□□□□□ -2.2
ACTN1P12814 Y_RNA.396-201ENST00000383949 103 ntBASIC1.31□□□□□ -2.2
ACTN1P12814 SNORD72-201ENST00000390994 80 ntBASIC1.31□□□□□ -2.2
ACTN1P12814 MIR548J-201ENST00000408833 112 ntBASIC1.31□□□□□ -2.2
ACTN1P12814 HMGN2P32-201ENST00000444648 269 ntBASIC1.31□□□□□ -2.2
ACTN1P12814 PVT1_3.1-201ENST00000620853 95 ntBASIC1.31□□□□□ -2.2
ACTN1P12814 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
ACTN1P12814 Y_RNA.14-201ENST00000362415 103 ntBASIC1.3□□□□□ -2.2
ACTN1P12814 Y_RNA.36-201ENST00000362602 112 ntBASIC1.3□□□□□ -2.2
ACTN1P12814 Y_RNA.44-201ENST00000362676 108 ntBASIC1.3□□□□□ -2.2
ACTN1P12814 Y_RNA.162-201ENST00000363683 102 ntBASIC1.3□□□□□ -2.2
ACTN1P12814 RNU6-651P-201ENST00000411040 105 ntBASIC1.3□□□□□ -2.2
ACTN1P12814 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.3□□□□□ -2.2
ACTN1P12814 SNORD111.1-201ENST00000516421 86 ntBASIC1.3□□□□□ -2.2
ACTN1P12814 RNU6-113P-201ENST00000516653 101 ntBASIC1.3□□□□□ -2.2
ACTN1P12814 SNORA18.7-201ENST00000516910 131 ntBASIC1.3□□□□□ -2.2
ACTN1P12814 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
ACTN1P12814 Y_RNA.275-201ENST00000364726 110 ntBASIC1.29□□□□□ -2.2
ACTN1P12814 RNU6-740P-201ENST00000364734 105 ntBASIC1.29□□□□□ -2.2
ACTN1P12814 RNU6-144P-201ENST00000383951 107 ntBASIC1.29□□□□□ -2.2
ACTN1P12814 RNU6-211P-201ENST00000384047 107 ntBASIC1.29□□□□□ -2.2
ACTN1P12814 MIR136-201ENST00000385207 82 ntBASIC1.29□□□□□ -2.2
ACTN1P12814 MIR618-201ENST00000385287 98 ntBASIC1.29□□□□□ -2.2
ACTN1P12814 SNORD11-201ENST00000459124 84 ntBASIC1.29□□□□□ -2.2
ACTN1P12814 AC048334.1-201ENST00000477975 159 ntBASIC1.29□□□□□ -2.2
ACTN1P12814 SNORA31.2-201ENST00000516019 134 ntBASIC1.29□□□□□ -2.2
ACTN1P12814 RN7SKP179-201ENST00000516126 217 ntBASIC1.29□□□□□ -2.2
ACTN1P12814 MIR4724-201ENST00000579485 89 ntBASIC1.29□□□□□ -2.2
ACTN1P12814 AL049861.1-201ENST00000603130 150 ntBASIC1.29□□□□□ -2.2
ACTN1P12814 UBE2WP1-201ENST00000362030 340 ntBASIC1.28□□□□□ -2.2
ACTN1P12814 Y_RNA.149-201ENST00000363558 117 ntBASIC1.28□□□□□ -2.2
ACTN1P12814 RNU6-442P-201ENST00000383968 104 ntBASIC1.28□□□□□ -2.2
ACTN1P12814 RNU6-472P-201ENST00000384299 107 ntBASIC1.28□□□□□ -2.2
ACTN1P12814 RPL39P39-201ENST00000455840 151 ntBASIC1.28□□□□□ -2.2
ACTN1P12814 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.28□□□□□ -2.2
ACTN1P12814 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.28□□□□□ -2.2
ACTN1P12814 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.28□□□□□ -2.2
ACTN1P12814 AC008507.4-201ENST00000585464 127 ntBASIC1.28□□□□□ -2.2
ACTN1P12814 AC006006.1-201ENST00000603082 144 ntBASIC1.28□□□□□ -2.2
ACTN1P12814 AL357312.1-201ENST00000603879 298 ntBASIC1.28□□□□□ -2.2
ACTN1P12814 AL096861.1-201ENST00000610899 123 ntBASIC1.28□□□□□ -2.2
ACTN1P12814 U2.14-201ENST00000615943 113 ntBASIC1.28□□□□□ -2.2
ACTN1P12814 MIR6779-201ENST00000617283 64 ntBASIC1.28□□□□□ -2.2
ACTN1P12814 U6.104-201ENST00000637979 90 ntBASIC1.28□□□□□ -2.2
ACTN1P12814 AC099654.10-201ENST00000640395 161 ntBASIC1.28□□□□□ -2.2
ACTN1P12814 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
ACTN1P12814 Y_RNA.54-201ENST00000362766 105 ntBASIC1.27□□□□□ -2.21
ACTN1P12814 Y_RNA.572-201ENST00000384757 98 ntBASIC1.27□□□□□ -2.21
ACTN1P12814 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.27□□□□□ -2.21
ACTN1P12814 AL358176.2-201ENST00000425769 204 ntBASIC1.27□□□□□ -2.21
ACTN1P12814 RPS23P4-201ENST00000487908 423 ntBASIC1.27□□□□□ -2.21
ACTN1P12814 AL133373.1-201ENST00000497098 94 ntBASIC1.27□□□□□ -2.21
ACTN1P12814 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.27□□□□□ -2.21
ACTN1P12814 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.27□□□□□ -2.21
ACTN1P12814 Y_RNA.24-201ENST00000362508 103 ntBASIC1.26□□□□□ -2.21
ACTN1P12814 SNORD38C-201ENST00000384381 69 ntBASIC1.26□□□□□ -2.21
ACTN1P12814 AL603910.2-201ENST00000407268 136 ntBASIC1.26□□□□□ -2.21
ACTN1P12814 RNU2-38P-201ENST00000410856 79 ntBASIC1.26□□□□□ -2.21
ACTN1P12814 AC023449.1-201ENST00000454464 154 ntBASIC1.26□□□□□ -2.21
ACTN1P12814 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.26□□□□□ -2.21
ACTN1P12814 AC087685.1-201ENST00000587507 141 ntBASIC1.26□□□□□ -2.21
ACTN1P12814 AL353621.2-201ENST00000605340 133 ntBASIC1.26□□□□□ -2.21
ACTN1P12814 AC015726.2-201ENST00000620112 122 ntBASIC1.26□□□□□ -2.21
ACTN1P12814 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.26□□□□□ -2.21
ACTN1P12814 MIR6767-201ENST00000637302 66 ntBASIC1.26□□□□□ -2.21
ACTN1P12814 RNU6-268P-201ENST00000364174 107 ntBASIC1.25□□□□□ -2.21
ACTN1P12814 MIR520C-201ENST00000385005 87 ntBASIC1.25□□□□□ -2.21
ACTN1P12814 Y_RNA.679-201ENST00000516416 91 ntBASIC1.25□□□□□ -2.21
ACTN1P12814 MIR3192-201ENST00000584920 77 ntBASIC1.25□□□□□ -2.21
ACTN1P12814 Y_RNA.802-201ENST00000614892 130 ntBASIC1.25□□□□□ -2.21
ACTN1P12814 SNORA70.7-201ENST00000384159 133 ntBASIC1.24□□□□□ -2.21
ACTN1P12814 RNU6-910P-201ENST00000390844 107 ntBASIC1.24□□□□□ -2.21
ACTN1P12814 Y_RNA.590-201ENST00000410140 107 ntBASIC1.24□□□□□ -2.21
ACTN1P12814 AL118496.2-201ENST00000448300 230 ntBASIC1.24□□□□□ -2.21
ACTN1P12814 SNORD123-201ENST00000459473 70 ntBASIC1.24□□□□□ -2.21
ACTN1P12814 RNU6-1045P-201ENST00000516321 107 ntBASIC1.24□□□□□ -2.21
ACTN1P12814 RNU7-149P-201ENST00000516739 59 ntBASIC1.24□□□□□ -2.21
ACTN1P12814 SNORA74.3-201ENST00000517108 154 ntBASIC1.24□□□□□ -2.21
ACTN1P12814 MIR4719-201ENST00000585233 84 ntBASIC1.24□□□□□ -2.21
ACTN1P12814 AC012433.1-201ENST00000588916 398 ntBASIC1.24□□□□□ -2.21
ACTN1P12814 MIR335-201ENST00000362173 94 ntBASIC1.23□□□□□ -2.21
ACTN1P12814 Y_RNA.587-201ENST00000391210 103 ntBASIC1.23□□□□□ -2.21
ACTN1P12814 AC245047.8-201ENST00000456455 284 ntBASIC1.23□□□□□ -2.21
ACTN1P12814 RNU7-41P-201ENST00000515917 61 ntBASIC1.23□□□□□ -2.21
ACTN1P12814 RNU6-1007P-201ENST00000516586 107 ntBASIC1.23□□□□□ -2.21
ACTN1P12814 AL022345.2-201ENST00000606307 135 ntBASIC1.23□□□□□ -2.21
ACTN1P12814 uc_338.4-201ENST00000616635 176 ntBASIC1.23□□□□□ -2.21
ACTN1P12814 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.23□□□□□ -2.21
ACTN1P12814 SNORA25.3-201ENST00000363205 127 ntBASIC1.22□□□□□ -2.21
ACTN1P12814 Y_RNA.277-201ENST00000364754 102 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms