Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 uc_338.22-201ENST00000622722 187 ntBASIC0.48□□□□□ -2.33
IGHV3-43DP0DP04 MTND1P7-201ENST00000632801 297 ntBASIC0.48□□□□□ -2.33
IGHV3-43DP0DP04 MIR1-1-201ENST00000362147 71 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 RNU6-1205P-201ENST00000363625 106 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 Y_RNA.445-201ENST00000384168 102 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 RNU6-102P-201ENST00000384485 104 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 SNORD105-201ENST00000386910 85 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 RNU6-763P-201ENST00000390865 106 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 RNU6-847P-201ENST00000411115 108 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 MTND4P19-201ENST00000446659 478 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 AC098869.1-201ENST00000481627 292 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 AC004817.2-201ENST00000561794 651 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 AC011195.1-201ENST00000578177 177 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 MIR6504-201ENST00000613520 61 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 AC243994.1-201ENST00000618627 109 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 AC090574.1-201ENST00000623186 233 ntBASIC0.47□□□□□ -2.33
IGHV3-43DP0DP04 MIR369-201ENST00000362155 70 ntBASIC0.46□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.136-201ENST00000363444 102 ntBASIC0.46□□□□□ -2.34
IGHV3-43DP0DP04 SNORA63.7-201ENST00000365579 123 ntBASIC0.46□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-144P-201ENST00000383951 107 ntBASIC0.46□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.569-201ENST00000384749 103 ntBASIC0.46□□□□□ -2.34
IGHV3-43DP0DP04 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
IGHV3-43DP0DP04 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
IGHV3-43DP0DP04 AC244098.3-201ENST00000424803 96 ntBASIC0.46□□□□□ -2.34
IGHV3-43DP0DP04 HSPE1P25-201ENST00000455484 251 ntBASIC0.46□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-764P-201ENST00000516396 105 ntBASIC0.46□□□□□ -2.34
IGHV3-43DP0DP04 AP000753.3-201ENST00000604083 169 ntBASIC0.46□□□□□ -2.34
IGHV3-43DP0DP04 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
IGHV3-43DP0DP04 RNU4-90P-201ENST00000362773 141 ntBASIC0.45□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.183-201ENST00000363882 113 ntBASIC0.45□□□□□ -2.34
IGHV3-43DP0DP04 SNORA25.9-201ENST00000365087 128 ntBASIC0.45□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.376-201ENST00000365638 108 ntBASIC0.45□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.395-201ENST00000383945 109 ntBASIC0.45□□□□□ -2.34
IGHV3-43DP0DP04 MT-TN-201ENST00000387400 73 ntBASIC0.45□□□□□ -2.34
IGHV3-43DP0DP04 MRPS35P2-201ENST00000508242 191 ntBASIC0.45□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-496P-201ENST00000516145 99 ntBASIC0.45□□□□□ -2.34
IGHV3-43DP0DP04 RNU7-25P-201ENST00000516544 62 ntBASIC0.45□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.715-201ENST00000517082 110 ntBASIC0.45□□□□□ -2.34
IGHV3-43DP0DP04 MIR4452-201ENST00000583004 71 ntBASIC0.45□□□□□ -2.34
IGHV3-43DP0DP04 C8orf59P2-201ENST00000603441 271 ntBASIC0.45□□□□□ -2.34
IGHV3-43DP0DP04 AC090971.5-201ENST00000621102 293 ntBASIC0.45□□□□□ -2.34
IGHV3-43DP0DP04 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 MIR377-201ENST00000362145 69 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.14-201ENST00000362415 103 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-450P-201ENST00000364654 107 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.431-201ENST00000384086 102 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.547-201ENST00000384654 119 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-205P-201ENST00000390858 107 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 SNORD115-46-201ENST00000390982 71 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 MIR548O-201ENST00000408583 114 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-383P-201ENST00000410864 94 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 RNA5SP222-201ENST00000411039 105 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 MTCO1P5-201ENST00000433573 344 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 AC107297.1-201ENST00000459991 176 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 RNU2-13P-201ENST00000515909 113 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 RNU4-54P-201ENST00000516428 129 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 RNA5SP121-201ENST00000516537 101 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 RNU7-149P-201ENST00000516739 59 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-897P-201ENST00000517135 105 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 RAC1P9-201ENST00000604990 392 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 AC022140.2-201ENST00000623500 188 ntBASIC0.44□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-945P-201ENST00000383947 107 ntBASIC0.43□□□□□ -2.34
IGHV3-43DP0DP04 SNORA36.2-201ENST00000384004 127 ntBASIC0.43□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.419-201ENST00000384041 102 ntBASIC0.43□□□□□ -2.34
IGHV3-43DP0DP04 MIR548J-201ENST00000408833 112 ntBASIC0.43□□□□□ -2.34
IGHV3-43DP0DP04 AC022028.1-201ENST00000412054 408 ntBASIC0.43□□□□□ -2.34
IGHV3-43DP0DP04 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.43□□□□□ -2.34
IGHV3-43DP0DP04 AL512605.2-201ENST00000592972 256 ntBASIC0.43□□□□□ -2.34
IGHV3-43DP0DP04 AL049861.1-201ENST00000603130 150 ntBASIC0.43□□□□□ -2.34
IGHV3-43DP0DP04 AC013791.1-201ENST00000616619 62 ntBASIC0.43□□□□□ -2.34
IGHV3-43DP0DP04 uc_338.4-201ENST00000616635 176 ntBASIC0.43□□□□□ -2.34
IGHV3-43DP0DP04 MIR367-201ENST00000362299 68 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.31-201ENST00000362574 102 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 SNORD45.3-201ENST00000363836 72 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 RNA5SP499-201ENST00000363982 119 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 SNORD42.2-201ENST00000365570 69 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-125P-201ENST00000384505 107 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-823P-201ENST00000391042 103 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.645-201ENST00000391229 102 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-101P-201ENST00000410323 104 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-733P-201ENST00000410759 104 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.639-201ENST00000458981 102 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 snoU13.21-201ENST00000459368 105 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.637-201ENST00000459424 114 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 MIR4264-201ENST00000583520 66 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 MIR6788-201ENST00000618842 66 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 uc_338.17-201ENST00000619633 179 ntBASIC0.42□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.241-201ENST00000364470 117 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-934P-201ENST00000365154 107 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 RNU6-580P-201ENST00000365159 107 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.389-201ENST00000383924 113 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.581-201ENST00000391017 97 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 RNA5SP496-201ENST00000391240 109 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 MIR1252-201ENST00000408861 65 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms