Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RNU6-268P-201ENST00000364174 107 ntBASIC1.08□□□□□ -2.24
RAB40ALP0C0E4 SNORD114-22-201ENST00000365423 72 ntBASIC1.08□□□□□ -2.24
RAB40ALP0C0E4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.08□□□□□ -2.24
RAB40ALP0C0E4 SNORA80D-201ENST00000384488 135 ntBASIC1.08□□□□□ -2.24
RAB40ALP0C0E4 MIR606-201ENST00000384851 96 ntBASIC1.08□□□□□ -2.24
RAB40ALP0C0E4 SNRPGP14-201ENST00000435400 219 ntBASIC1.08□□□□□ -2.24
RAB40ALP0C0E4 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
RAB40ALP0C0E4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.08□□□□□ -2.24
RAB40ALP0C0E4 RNU7-41P-201ENST00000515917 61 ntBASIC1.08□□□□□ -2.24
RAB40ALP0C0E4 SNORD79.1-201ENST00000516069 84 ntBASIC1.08□□□□□ -2.24
RAB40ALP0C0E4 AC090821.2-201ENST00000523552 176 ntBASIC1.08□□□□□ -2.24
RAB40ALP0C0E4 AL008718.3-201ENST00000610217 321 ntBASIC1.08□□□□□ -2.24
RAB40ALP0C0E4 Y_RNA.122-201ENST00000363331 96 ntBASIC1.07□□□□□ -2.24
RAB40ALP0C0E4 RNA5SP48-201ENST00000363969 126 ntBASIC1.07□□□□□ -2.24
RAB40ALP0C0E4 RNU1-93P-201ENST00000364704 169 ntBASIC1.07□□□□□ -2.24
RAB40ALP0C0E4 Y_RNA.376-201ENST00000365638 108 ntBASIC1.07□□□□□ -2.24
RAB40ALP0C0E4 SNORD12-201ENST00000391002 90 ntBASIC1.07□□□□□ -2.24
RAB40ALP0C0E4 RNA5SP496-201ENST00000391240 109 ntBASIC1.07□□□□□ -2.24
RAB40ALP0C0E4 AL603910.2-201ENST00000407268 136 ntBASIC1.07□□□□□ -2.24
RAB40ALP0C0E4 AC063976.4-201ENST00000421971 163 ntBASIC1.07□□□□□ -2.24
RAB40ALP0C0E4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.07□□□□□ -2.24
RAB40ALP0C0E4 AL049861.1-201ENST00000603130 150 ntBASIC1.07□□□□□ -2.24
RAB40ALP0C0E4 AP001282.2-201ENST00000616149 309 ntBASIC1.07□□□□□ -2.24
RAB40ALP0C0E4 Pinc.1-201ENST00000616452 154 ntBASIC1.07□□□□□ -2.24
RAB40ALP0C0E4 AC015726.2-201ENST00000620112 122 ntBASIC1.07□□□□□ -2.24
RAB40ALP0C0E4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.07□□□□□ -2.24
RAB40ALP0C0E4 MIR96-201ENST00000362288 78 ntBASIC1.06□□□□□ -2.24
RAB40ALP0C0E4 RNU6-694P-201ENST00000364071 147 ntBASIC1.06□□□□□ -2.24
RAB40ALP0C0E4 Y_RNA.275-201ENST00000364726 110 ntBASIC1.06□□□□□ -2.24
RAB40ALP0C0E4 RNU6-1289P-201ENST00000384431 106 ntBASIC1.06□□□□□ -2.24
RAB40ALP0C0E4 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
RAB40ALP0C0E4 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
RAB40ALP0C0E4 snoU13.25-201ENST00000458945 104 ntBASIC1.06□□□□□ -2.24
RAB40ALP0C0E4 SNORD116-28-201ENST00000516123 91 ntBASIC1.06□□□□□ -2.24
RAB40ALP0C0E4 AC006006.1-201ENST00000603082 144 ntBASIC1.06□□□□□ -2.24
RAB40ALP0C0E4 AC006441.5-201ENST00000612680 209 ntBASIC1.06□□□□□ -2.24
RAB40ALP0C0E4 Y_RNA.802-201ENST00000614892 130 ntBASIC1.06□□□□□ -2.24
RAB40ALP0C0E4 uc_338.4-201ENST00000616635 176 ntBASIC1.06□□□□□ -2.24
RAB40ALP0C0E4 U6.104-201ENST00000637979 90 ntBASIC1.06□□□□□ -2.24
RAB40ALP0C0E4 AC068700.1-201ENST00000565862 3754 ntBASIC1.06□□□□□ -2.24
RAB40ALP0C0E4 AL442644.1-201ENST00000454390 3105 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 MIR103A2-201ENST00000362154 78 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 Y_RNA.44-201ENST00000362676 108 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 RNA5SP264-201ENST00000363115 107 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 SNORA25.3-201ENST00000363205 127 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 RNU1-124P-201ENST00000363861 145 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 Y_RNA.237-201ENST00000364439 102 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 RNU6-211P-201ENST00000384047 107 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 MIR1302-6-201ENST00000408466 90 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 RPS29P28-201ENST00000446439 141 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 RN7SKP164-201ENST00000516138 266 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 RNU6-830P-201ENST00000516353 107 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 RNU7-149P-201ENST00000516739 59 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 MIR548AR-201ENST00000582191 57 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 SNORA4-201ENST00000584302 138 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 AL021707.8-201ENST00000609428 183 ntBASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.05□□□□□ -2.24
RAB40ALP0C0E4 Y_RNA.145-201ENST00000363527 102 ntBASIC1.04□□□□□ -2.24
RAB40ALP0C0E4 RNU4-10P-201ENST00000364383 140 ntBASIC1.04□□□□□ -2.24
RAB40ALP0C0E4 SNORA63C-201ENST00000364578 129 ntBASIC1.04□□□□□ -2.24
RAB40ALP0C0E4 Y_RNA.461-201ENST00000384263 103 ntBASIC1.04□□□□□ -2.24
RAB40ALP0C0E4 MIR526A2-201ENST00000390198 65 ntBASIC1.04□□□□□ -2.24
RAB40ALP0C0E4 SNORA75.2-201ENST00000391138 150 ntBASIC1.04□□□□□ -2.24
RAB40ALP0C0E4 SNORA75.3-201ENST00000391231 150 ntBASIC1.04□□□□□ -2.24
RAB40ALP0C0E4 AC002429.1-201ENST00000437672 148 ntBASIC1.04□□□□□ -2.24
RAB40ALP0C0E4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.04□□□□□ -2.24
RAB40ALP0C0E4 snoU13.18-201ENST00000459483 104 ntBASIC1.04□□□□□ -2.24
RAB40ALP0C0E4 AC008737.2-201ENST00000599446 118 ntBASIC1.04□□□□□ -2.24
RAB40ALP0C0E4 MIR8062-201ENST00000621515 85 ntBASIC1.04□□□□□ -2.24
RAB40ALP0C0E4 AC008133.2-201ENST00000624540 351 ntBASIC1.04□□□□□ -2.24
RAB40ALP0C0E4 AC008163.1-202ENST00000636004 2889 ntBASIC1.03□□□□□ -2.24
RAB40ALP0C0E4 Y_RNA.117-201ENST00000363294 101 ntBASIC1.03□□□□□ -2.24
RAB40ALP0C0E4 RNU6-1067P-201ENST00000384752 107 ntBASIC1.03□□□□□ -2.24
RAB40ALP0C0E4 Y_RNA.574-201ENST00000384766 95 ntBASIC1.03□□□□□ -2.24
RAB40ALP0C0E4 MIR19B1-201ENST00000384829 87 ntBASIC1.03□□□□□ -2.24
RAB40ALP0C0E4 SNORD28B-201ENST00000390993 75 ntBASIC1.03□□□□□ -2.24
RAB40ALP0C0E4 U8.17-201ENST00000391292 132 ntBASIC1.03□□□□□ -2.24
RAB40ALP0C0E4 RPS26P48-201ENST00000491713 339 ntBASIC1.03□□□□□ -2.24
RAB40ALP0C0E4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.03□□□□□ -2.24
RAB40ALP0C0E4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.03□□□□□ -2.24
RAB40ALP0C0E4 U2.14-201ENST00000615943 113 ntBASIC1.03□□□□□ -2.24
RAB40ALP0C0E4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.03□□□□□ -2.24
RAB40ALP0C0E4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
RAB40ALP0C0E4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RAB40ALP0C0E4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.02□□□□□ -2.25
RAB40ALP0C0E4 SNORA8.3-201ENST00000384679 139 ntBASIC1.02□□□□□ -2.25
RAB40ALP0C0E4 MIR548F4-201ENST00000408515 105 ntBASIC1.02□□□□□ -2.25
RAB40ALP0C0E4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.02□□□□□ -2.25
RAB40ALP0C0E4 RNU7-90P-201ENST00000459216 62 ntBASIC1.02□□□□□ -2.25
RAB40ALP0C0E4 RNU7-21P-201ENST00000459430 62 ntBASIC1.02□□□□□ -2.25
RAB40ALP0C0E4 RNU7-181P-201ENST00000517234 74 ntBASIC1.02□□□□□ -2.25
RAB40ALP0C0E4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.02□□□□□ -2.25
RAB40ALP0C0E4 MIR5688-201ENST00000580619 83 ntBASIC1.02□□□□□ -2.25
RAB40ALP0C0E4 MIR7111-201ENST00000619751 72 ntBASIC1.02□□□□□ -2.25
RAB40ALP0C0E4 MIR4251-201ENST00000635819 61 ntBASIC1.02□□□□□ -2.25
RAB40ALP0C0E4 MIR335-201ENST00000362173 94 ntBASIC1.01□□□□□ -2.25
RAB40ALP0C0E4 SNORD114-27-201ENST00000363766 70 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms