Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AP000942.4-201ENST00000604811 241 ntBASIC-0.73□□□□□ -2.53
TPM1P09493 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.74□□□□□ -2.53
TPM1P09493 SNORA1.1-201ENST00000364671 133 ntBASIC-0.74□□□□□ -2.53
TPM1P09493 MIR215-201ENST00000384858 110 ntBASIC-0.74□□□□□ -2.53
TPM1P09493 RNA5SP118-201ENST00000410385 109 ntBASIC-0.74□□□□□ -2.53
TPM1P09493 FCF1P9-201ENST00000412546 282 ntBASIC-0.74□□□□□ -2.53
TPM1P09493 FCF1P4-201ENST00000448326 183 ntBASIC-0.74□□□□□ -2.53
TPM1P09493 RNU6-966P-201ENST00000516479 104 ntBASIC-0.74□□□□□ -2.53
TPM1P09493 MTND3P12-201ENST00000559068 328 ntBASIC-0.74□□□□□ -2.53
TPM1P09493 AC006362.1-201ENST00000567392 174 ntBASIC-0.74□□□□□ -2.53
TPM1P09493 AC145350.1-201ENST00000567426 208 ntBASIC-0.74□□□□□ -2.53
TPM1P09493 MIR4752-201ENST00000579672 72 ntBASIC-0.74□□□□□ -2.53
TPM1P09493 RNU1-29P-201ENST00000606574 126 ntBASIC-0.74□□□□□ -2.53
TPM1P09493 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.74□□□□□ -2.53
TPM1P09493 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.75□□□□□ -2.53
TPM1P09493 RNU6-46P-201ENST00000383860 107 ntBASIC-0.75□□□□□ -2.53
TPM1P09493 RNU6-259P-201ENST00000383999 107 ntBASIC-0.75□□□□□ -2.53
TPM1P09493 RNU6-20P-201ENST00000384106 107 ntBASIC-0.75□□□□□ -2.53
TPM1P09493 DEFB108C-201ENST00000400154 252 ntBASIC-0.75□□□□□ -2.53
TPM1P09493 HMGN1P33-201ENST00000432945 451 ntBASIC-0.75□□□□□ -2.53
TPM1P09493 MTND4LP16-201ENST00000440828 295 ntBASIC-0.75□□□□□ -2.53
TPM1P09493 AC026782.1-201ENST00000512952 449 ntBASIC-0.75□□□□□ -2.53
TPM1P09493 RNU7-53P-201ENST00000516705 60 ntBASIC-0.75□□□□□ -2.53
TPM1P09493 AC067863.3-201ENST00000624172 122 ntBASIC-0.75□□□□□ -2.53
TPM1P09493 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.76□□□□□ -2.53
TPM1P09493 AL138752.1-201ENST00000452964 351 ntBASIC-0.76□□□□□ -2.53
TPM1P09493 AC010424.1-201ENST00000506336 297 ntBASIC-0.76□□□□□ -2.53
TPM1P09493 RNU6-470P-201ENST00000515954 104 ntBASIC-0.76□□□□□ -2.53
TPM1P09493 RNA5SP330-201ENST00000517096 96 ntBASIC-0.76□□□□□ -2.53
TPM1P09493 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.76□□□□□ -2.53
TPM1P09493 AC006600.1-201ENST00000572529 153 ntBASIC-0.76□□□□□ -2.53
TPM1P09493 AL670379.3-201ENST00000605040 251 ntBASIC-0.76□□□□□ -2.53
TPM1P09493 MIR548AY-201ENST00000617669 107 ntBASIC-0.76□□□□□ -2.53
TPM1P09493 AC090617.10-201ENST00000624308 134 ntBASIC-0.76□□□□□ -2.53
TPM1P09493 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.77□□□□□ -2.53
TPM1P09493 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.77□□□□□ -2.53
TPM1P09493 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.77□□□□□ -2.53
TPM1P09493 SNORD12C-201ENST00000386307 89 ntBASIC-0.77□□□□□ -2.53
TPM1P09493 MIR548O-201ENST00000408583 114 ntBASIC-0.77□□□□□ -2.53
TPM1P09493 PDCL2P1-201ENST00000419302 352 ntBASIC-0.77□□□□□ -2.53
TPM1P09493 MTND4P28-201ENST00000426217 387 ntBASIC-0.77□□□□□ -2.53
TPM1P09493 SNORD11-201ENST00000459124 84 ntBASIC-0.77□□□□□ -2.53
TPM1P09493 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.78□□□□□ -2.53
TPM1P09493 RNU6-626P-201ENST00000363354 107 ntBASIC-0.78□□□□□ -2.53
TPM1P09493 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.78□□□□□ -2.53
TPM1P09493 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.78□□□□□ -2.53
TPM1P09493 RNU6-437P-201ENST00000459408 95 ntBASIC-0.78□□□□□ -2.53
TPM1P09493 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.78□□□□□ -2.53
TPM1P09493 AC005730.3-201ENST00000583067 366 ntBASIC-0.78□□□□□ -2.53
TPM1P09493 AC022441.3-201ENST00000605737 136 ntBASIC-0.78□□□□□ -2.53
TPM1P09493 MIR1244-1-201ENST00000612829 85 ntBASIC-0.78□□□□□ -2.53
TPM1P09493 MIR2909-201ENST00000617113 69 ntBASIC-0.78□□□□□ -2.53
TPM1P09493 MIR1244-3-201ENST00000635744 85 ntBASIC-0.78□□□□□ -2.53
TPM1P09493 AC090582.1-201ENST00000636321 199 ntBASIC-0.78□□□□□ -2.53
TPM1P09493 MIR1244-2-201ENST00000636449 85 ntBASIC-0.78□□□□□ -2.53
TPM1P09493 MIR1244-4-202ENST00000636813 85 ntBASIC-0.78□□□□□ -2.53
TPM1P09493 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.79□□□□□ -2.54
TPM1P09493 MIR501-201ENST00000390204 84 ntBASIC-0.79□□□□□ -2.54
TPM1P09493 MIR1278-201ENST00000408753 81 ntBASIC-0.79□□□□□ -2.54
TPM1P09493 RNU6-373P-201ENST00000411247 98 ntBASIC-0.79□□□□□ -2.54
TPM1P09493 MTND2P9-201ENST00000422293 931 ntBASIC-0.79□□□□□ -2.54
TPM1P09493 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.79□□□□□ -2.54
TPM1P09493 MIR2053-201ENST00000459295 91 ntBASIC-0.79□□□□□ -2.54
TPM1P09493 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.79□□□□□ -2.54
TPM1P09493 RNU6-180P-201ENST00000516697 61 ntBASIC-0.79□□□□□ -2.54
TPM1P09493 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.79□□□□□ -2.54
TPM1P09493 AC131281.1-201ENST00000522984 164 ntBASIC-0.79□□□□□ -2.54
TPM1P09493 MIR4790-201ENST00000577799 79 ntBASIC-0.79□□□□□ -2.54
TPM1P09493 MIR6082-201ENST00000613604 109 ntBASIC-0.79□□□□□ -2.54
TPM1P09493 AC244669.1-204ENST00000621564 178 ntBASIC-0.79□□□□□ -2.54
TPM1P09493 RNU6-674P-201ENST00000363831 107 ntBASIC-0.8□□□□□ -2.54
TPM1P09493 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.8□□□□□ -2.54
TPM1P09493 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.8□□□□□ -2.54
TPM1P09493 RNU6-831P-201ENST00000384548 107 ntBASIC-0.8□□□□□ -2.54
TPM1P09493 AL590004.1-201ENST00000405321 300 ntBASIC-0.8□□□□□ -2.54
TPM1P09493 AC087499.4-201ENST00000448505 178 ntBASIC-0.8□□□□□ -2.54
TPM1P09493 RNU6-765P-201ENST00000516916 99 ntBASIC-0.8□□□□□ -2.54
TPM1P09493 AL080274.1-201ENST00000605565 220 ntBASIC-0.8□□□□□ -2.54
TPM1P09493 SNORA40.5-201ENST00000391061 128 ntBASIC-0.81□□□□□ -2.54
TPM1P09493 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.81□□□□□ -2.54
TPM1P09493 AF228730.4-201ENST00000421457 183 ntBASIC-0.81□□□□□ -2.54
TPM1P09493 RPL39P25-201ENST00000449384 154 ntBASIC-0.81□□□□□ -2.54
TPM1P09493 AC098826.2-201ENST00000452011 651 ntBASIC-0.81□□□□□ -2.54
TPM1P09493 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.81□□□□□ -2.54
TPM1P09493 MIR3666-201ENST00000607845 111 ntBASIC-0.81□□□□□ -2.54
TPM1P09493 AC092794.2-201ENST00000620933 563 ntBASIC-0.81□□□□□ -2.54
TPM1P09493 MIR1321-201ENST00000637766 79 ntBASIC-0.81□□□□□ -2.54
TPM1P09493 AC024614.3-201ENST00000637860 256 ntBASIC-0.81□□□□□ -2.54
TPM1P09493 RNA5SP275-201ENST00000363936 118 ntBASIC-0.82□□□□□ -2.54
TPM1P09493 RNU4-50P-201ENST00000364361 141 ntBASIC-0.82□□□□□ -2.54
TPM1P09493 SNORD116-9-201ENST00000384000 95 ntBASIC-0.82□□□□□ -2.54
TPM1P09493 SNORD116-3-201ENST00000384287 95 ntBASIC-0.82□□□□□ -2.54
TPM1P09493 SNORD116-8-201ENST00000384365 95 ntBASIC-0.82□□□□□ -2.54
TPM1P09493 SNORD116-7-201ENST00000384404 95 ntBASIC-0.82□□□□□ -2.54
TPM1P09493 SNORD116-5-201ENST00000384462 95 ntBASIC-0.82□□□□□ -2.54
TPM1P09493 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.82□□□□□ -2.54
TPM1P09493 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.82□□□□□ -2.54
TPM1P09493 MTND5P5-201ENST00000503764 376 ntBASIC-0.82□□□□□ -2.54
TPM1P09493 RNU2-60P-201ENST00000517290 128 ntBASIC-0.82□□□□□ -2.54
TPM1P09493 MIR548AD-201ENST00000584780 82 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 255.8 ms