Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNU6-985P-201ENST00000410182 104 ntBASIC1.04□□□□□ -2.24
PDGFBP01127 BTF3P11-201ENST00000426582 477 ntBASIC1.04□□□□□ -2.24
PDGFBP01127 MTCYBP6-201ENST00000441810 138 ntBASIC1.04□□□□□ -2.24
PDGFBP01127 RNU6-437P-201ENST00000459408 95 ntBASIC1.04□□□□□ -2.24
PDGFBP01127 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
PDGFBP01127 RNU2-31P-201ENST00000516954 155 ntBASIC1.04□□□□□ -2.24
PDGFBP01127 Y_RNA.714-201ENST00000517065 90 ntBASIC1.04□□□□□ -2.24
PDGFBP01127 MIR4698-201ENST00000577795 80 ntBASIC1.04□□□□□ -2.24
PDGFBP01127 AC005357.1-201ENST00000588399 301 ntBASIC1.04□□□□□ -2.24
PDGFBP01127 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.04□□□□□ -2.24
PDGFBP01127 RNU4-10P-201ENST00000364383 140 ntBASIC1.03□□□□□ -2.24
PDGFBP01127 MIR19B1-201ENST00000384829 87 ntBASIC1.03□□□□□ -2.24
PDGFBP01127 MIR452-201ENST00000385020 85 ntBASIC1.03□□□□□ -2.24
PDGFBP01127 RNU6-910P-201ENST00000390844 107 ntBASIC1.03□□□□□ -2.24
PDGFBP01127 Y_RNA.581-201ENST00000391017 97 ntBASIC1.03□□□□□ -2.24
PDGFBP01127 RNU6-1248P-201ENST00000391096 64 ntBASIC1.03□□□□□ -2.24
PDGFBP01127 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.03□□□□□ -2.24
PDGFBP01127 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.03□□□□□ -2.24
PDGFBP01127 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.03□□□□□ -2.24
PDGFBP01127 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.03□□□□□ -2.24
PDGFBP01127 RNU6-635P-201ENST00000516651 102 ntBASIC1.03□□□□□ -2.24
PDGFBP01127 DEFB108E-201ENST00000524692 240 ntBASIC1.03□□□□□ -2.24
PDGFBP01127 MIR4661-201ENST00000582720 75 ntBASIC1.03□□□□□ -2.24
PDGFBP01127 RNU6-1205P-201ENST00000363625 106 ntBASIC1.02□□□□□ -2.25
PDGFBP01127 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
PDGFBP01127 MIR136-201ENST00000385207 82 ntBASIC1.02□□□□□ -2.25
PDGFBP01127 AC245047.7-201ENST00000440265 293 ntBASIC1.02□□□□□ -2.25
PDGFBP01127 AC091959.1-201ENST00000495857 238 ntBASIC1.02□□□□□ -2.25
PDGFBP01127 RNA5SP330-201ENST00000517096 96 ntBASIC1.02□□□□□ -2.25
PDGFBP01127 AC090142.3-201ENST00000519012 385 ntBASIC1.02□□□□□ -2.25
PDGFBP01127 AC027279.3-201ENST00000625055 122 ntBASIC1.02□□□□□ -2.25
PDGFBP01127 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
PDGFBP01127 Y_RNA.84-201ENST00000363011 104 ntBASIC1.01□□□□□ -2.25
PDGFBP01127 SNORA25.3-201ENST00000363205 127 ntBASIC1.01□□□□□ -2.25
PDGFBP01127 RNU6-694P-201ENST00000364071 147 ntBASIC1.01□□□□□ -2.25
PDGFBP01127 U8.5-201ENST00000364528 136 ntBASIC1.01□□□□□ -2.25
PDGFBP01127 Y_RNA.258-201ENST00000364613 105 ntBASIC1.01□□□□□ -2.25
PDGFBP01127 Y_RNA.326-201ENST00000365176 113 ntBASIC1.01□□□□□ -2.25
PDGFBP01127 AC063976.4-201ENST00000421971 163 ntBASIC1.01□□□□□ -2.25
PDGFBP01127 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.01□□□□□ -2.25
PDGFBP01127 Y_RNA.637-201ENST00000459424 114 ntBASIC1.01□□□□□ -2.25
PDGFBP01127 NDUFA4P2-201ENST00000489989 244 ntBASIC1.01□□□□□ -2.25
PDGFBP01127 SNORD111.1-201ENST00000516421 86 ntBASIC1.01□□□□□ -2.25
PDGFBP01127 AL096861.1-201ENST00000610899 123 ntBASIC1.01□□□□□ -2.25
PDGFBP01127 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
PDGFBP01127 RNU6-899P-201ENST00000363947 107 ntBASIC1□□□□□ -2.25
PDGFBP01127 Y_RNA.336-201ENST00000365307 109 ntBASIC1□□□□□ -2.25
PDGFBP01127 Y_RNA.433-201ENST00000384089 102 ntBASIC1□□□□□ -2.25
PDGFBP01127 MIR570-201ENST00000384917 97 ntBASIC1□□□□□ -2.25
PDGFBP01127 MIR520C-201ENST00000385005 87 ntBASIC1□□□□□ -2.25
PDGFBP01127 MIR532-201ENST00000385025 91 ntBASIC1□□□□□ -2.25
PDGFBP01127 SNORD72-201ENST00000390994 80 ntBASIC1□□□□□ -2.25
PDGFBP01127 AL591704.2-201ENST00000421658 181 ntBASIC1□□□□□ -2.25
PDGFBP01127 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1□□□□□ -2.25
PDGFBP01127 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1□□□□□ -2.25
PDGFBP01127 MIR3192-201ENST00000584920 77 ntBASIC1□□□□□ -2.25
PDGFBP01127 MIR4762-201ENST00000585261 75 ntBASIC1□□□□□ -2.25
PDGFBP01127 AL049861.1-201ENST00000603130 150 ntBASIC1□□□□□ -2.25
PDGFBP01127 AC068700.1-201ENST00000565862 3754 ntBASIC0.99□□□□□ -2.25
PDGFBP01127 Y_RNA.117-201ENST00000363294 101 ntBASIC0.99□□□□□ -2.25
PDGFBP01127 SNORA63-201ENST00000363450 132 ntBASIC0.99□□□□□ -2.25
PDGFBP01127 Y_RNA.330-201ENST00000365230 109 ntBASIC0.99□□□□□ -2.25
PDGFBP01127 RNU6-713P-201ENST00000384761 107 ntBASIC0.99□□□□□ -2.25
PDGFBP01127 MRPL35P3-201ENST00000421557 364 ntBASIC0.99□□□□□ -2.25
PDGFBP01127 AC007742.2-201ENST00000618226 398 ntBASIC0.99□□□□□ -2.25
PDGFBP01127 AC015726.2-201ENST00000620112 122 ntBASIC0.99□□□□□ -2.25
PDGFBP01127 snoU18.1-201ENST00000629629 71 ntBASIC0.99□□□□□ -2.25
PDGFBP01127 Y_RNA.136-201ENST00000363444 102 ntBASIC0.98□□□□□ -2.25
PDGFBP01127 SNORA80D-201ENST00000384488 135 ntBASIC0.98□□□□□ -2.25
PDGFBP01127 MIR200A-201ENST00000384875 90 ntBASIC0.98□□□□□ -2.25
PDGFBP01127 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.98□□□□□ -2.25
PDGFBP01127 AL731563.1-201ENST00000442202 214 ntBASIC0.98□□□□□ -2.25
PDGFBP01127 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.98□□□□□ -2.25
PDGFBP01127 RNU7-41P-201ENST00000515917 61 ntBASIC0.98□□□□□ -2.25
PDGFBP01127 MIR2681-201ENST00000581814 105 ntBASIC0.98□□□□□ -2.25
PDGFBP01127 AC006504.6-201ENST00000590142 199 ntBASIC0.98□□□□□ -2.25
PDGFBP01127 AC008737.2-201ENST00000599446 118 ntBASIC0.98□□□□□ -2.25
PDGFBP01127 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
PDGFBP01127 AL109933.3-201ENST00000619095 188 ntBASIC0.98□□□□□ -2.25
PDGFBP01127 MIR367-201ENST00000362299 68 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 Y_RNA.14-201ENST00000362415 103 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 RNU6-1272P-201ENST00000362776 107 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 SNORD114-24-201ENST00000365029 72 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 Y_RNA.376-201ENST00000365638 108 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 RNU6-442P-201ENST00000383968 104 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 Y_RNA.572-201ENST00000384757 98 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 MIR606-201ENST00000384851 96 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 MIR1285-1-201ENST00000408593 84 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 SNORD123-201ENST00000459473 70 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.97□□□□□ -2.25
PDGFBP01127 SNORD79.1-201ENST00000516069 84 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 RNU6-1143P-201ENST00000516125 104 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 RNU6-1338P-201ENST00000516328 91 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 Y_RNA.720-201ENST00000517166 92 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 MIR5692C2-201ENST00000577959 77 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 AC013791.1-201ENST00000616619 62 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 MIR6513-201ENST00000621188 64 ntBASIC0.97□□□□□ -2.25
PDGFBP01127 Y_RNA.24-201ENST00000362508 103 ntBASIC0.96□□□□□ -2.26
PDGFBP01127 Y_RNA.237-201ENST00000364439 102 ntBASIC0.96□□□□□ -2.26
PDGFBP01127 RNU6-326P-201ENST00000365480 107 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 310.6 ms