Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RNU6-144P-201ENST00000383951 107 ntBASIC0.45□□□□□ -2.34
MBD3O95983 RNA5SP222-201ENST00000411039 105 ntBASIC0.45□□□□□ -2.34
MBD3O95983 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.45□□□□□ -2.34
MBD3O95983 RNU6-1132P-201ENST00000459214 107 ntBASIC0.45□□□□□ -2.34
MBD3O95983 SNORD19B-201ENST00000459623 84 ntBASIC0.45□□□□□ -2.34
MBD3O95983 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.45□□□□□ -2.34
MBD3O95983 RPL23AP91-201ENST00000569211 455 ntBASIC0.45□□□□□ -2.34
MBD3O95983 MIR4264-201ENST00000583520 66 ntBASIC0.45□□□□□ -2.34
MBD3O95983 AP000753.3-201ENST00000604083 169 ntBASIC0.45□□□□□ -2.34
MBD3O95983 Y_RNA.222-201ENST00000364264 102 ntBASIC0.44□□□□□ -2.34
MBD3O95983 SNORA36.2-201ENST00000384004 127 ntBASIC0.44□□□□□ -2.34
MBD3O95983 SNORA24-201ENST00000384096 131 ntBASIC0.44□□□□□ -2.34
MBD3O95983 Y_RNA.632-201ENST00000459189 102 ntBASIC0.44□□□□□ -2.34
MBD3O95983 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
MBD3O95983 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.44□□□□□ -2.34
MBD3O95983 RN7SL793P-201ENST00000583259 296 ntBASIC0.44□□□□□ -2.34
MBD3O95983 uc_338.4-201ENST00000616635 176 ntBASIC0.44□□□□□ -2.34
MBD3O95983 Y_RNA.5-201ENST00000362334 102 ntBASIC0.43□□□□□ -2.34
MBD3O95983 SNORD114-26-201ENST00000363543 72 ntBASIC0.43□□□□□ -2.34
MBD3O95983 RNU6-899P-201ENST00000363947 107 ntBASIC0.43□□□□□ -2.34
MBD3O95983 RNU6-937P-201ENST00000384325 106 ntBASIC0.43□□□□□ -2.34
MBD3O95983 MIR570-201ENST00000384917 97 ntBASIC0.43□□□□□ -2.34
MBD3O95983 MIR573-201ENST00000384964 99 ntBASIC0.43□□□□□ -2.34
MBD3O95983 SNORD72-201ENST00000390994 80 ntBASIC0.43□□□□□ -2.34
MBD3O95983 RNA5SP95-201ENST00000410319 137 ntBASIC0.43□□□□□ -2.34
MBD3O95983 AC236972.2-201ENST00000434979 310 ntBASIC0.43□□□□□ -2.34
MBD3O95983 POLR2KP2-201ENST00000438155 177 ntBASIC0.43□□□□□ -2.34
MBD3O95983 snoU13.16-201ENST00000459350 104 ntBASIC0.43□□□□□ -2.34
MBD3O95983 AC107297.1-201ENST00000459991 176 ntBASIC0.43□□□□□ -2.34
MBD3O95983 RNU7-181P-201ENST00000517234 74 ntBASIC0.43□□□□□ -2.34
MBD3O95983 SNORD58B-201ENST00000607313 66 ntBASIC0.43□□□□□ -2.34
MBD3O95983 AC243994.1-201ENST00000618627 109 ntBASIC0.43□□□□□ -2.34
MBD3O95983 PVT1_3.1-201ENST00000620853 95 ntBASIC0.43□□□□□ -2.34
MBD3O95983 AC243829.3-201ENST00000622177 108 ntBASIC0.43□□□□□ -2.34
MBD3O95983 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
MBD3O95983 SNORD114-23-201ENST00000363536 72 ntBASIC0.42□□□□□ -2.34
MBD3O95983 Y_RNA.393-201ENST00000383936 102 ntBASIC0.42□□□□□ -2.34
MBD3O95983 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
MBD3O95983 Y_RNA.471-201ENST00000384312 102 ntBASIC0.42□□□□□ -2.34
MBD3O95983 RNY1P4-201ENST00000384595 115 ntBASIC0.42□□□□□ -2.34
MBD3O95983 MIR7-2-201ENST00000384970 110 ntBASIC0.42□□□□□ -2.34
MBD3O95983 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.42□□□□□ -2.34
MBD3O95983 AC244023.1-201ENST00000426884 112 ntBASIC0.42□□□□□ -2.34
MBD3O95983 MTCO2P12-201ENST00000427426 682 ntBASIC0.42□□□□□ -2.34
MBD3O95983 AC098934.3-201ENST00000430450 190 ntBASIC0.42□□□□□ -2.34
MBD3O95983 AC092628.1-201ENST00000436250 252 ntBASIC0.42□□□□□ -2.34
MBD3O95983 AC023449.1-201ENST00000454464 154 ntBASIC0.42□□□□□ -2.34
MBD3O95983 MIR3145-201ENST00000580727 82 ntBASIC0.42□□□□□ -2.34
MBD3O95983 AC005357.1-201ENST00000588399 301 ntBASIC0.42□□□□□ -2.34
MBD3O95983 AC012433.1-201ENST00000588916 398 ntBASIC0.42□□□□□ -2.34
MBD3O95983 AC242498.1-201ENST00000604134 111 ntBASIC0.42□□□□□ -2.34
MBD3O95983 AC022140.2-201ENST00000623500 188 ntBASIC0.42□□□□□ -2.34
MBD3O95983 Y_RNA.136-201ENST00000363444 102 ntBASIC0.41□□□□□ -2.34
MBD3O95983 Y_RNA.143-201ENST00000363520 106 ntBASIC0.41□□□□□ -2.34
MBD3O95983 SNORD45.3-201ENST00000363836 72 ntBASIC0.41□□□□□ -2.34
MBD3O95983 RNU6-934P-201ENST00000365154 107 ntBASIC0.41□□□□□ -2.34
MBD3O95983 Y_RNA.390-201ENST00000383932 102 ntBASIC0.41□□□□□ -2.34
MBD3O95983 MIR193B-201ENST00000384907 83 ntBASIC0.41□□□□□ -2.34
MBD3O95983 RNU4-30P-201ENST00000410245 143 ntBASIC0.41□□□□□ -2.34
MBD3O95983 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.41□□□□□ -2.34
MBD3O95983 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.41□□□□□ -2.34
MBD3O95983 AL355297.3-201ENST00000604082 446 ntBASIC0.41□□□□□ -2.34
MBD3O95983 AC015726.2-201ENST00000620112 122 ntBASIC0.41□□□□□ -2.34
MBD3O95983 AC104985.2-201ENST00000620598 500 ntBASIC0.41□□□□□ -2.34
MBD3O95983 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.4□□□□□ -2.34
MBD3O95983 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.34
MBD3O95983 SNORA63C-201ENST00000364578 129 ntBASIC0.4□□□□□ -2.35
MBD3O95983 RNU6-1283P-201ENST00000365314 105 ntBASIC0.4□□□□□ -2.35
MBD3O95983 MIR140-201ENST00000385282 100 ntBASIC0.4□□□□□ -2.35
MBD3O95983 RNA5SP496-201ENST00000391240 109 ntBASIC0.4□□□□□ -2.35
MBD3O95983 RNU2-14P-201ENST00000411053 191 ntBASIC0.4□□□□□ -2.35
MBD3O95983 AC010655.3-201ENST00000478818 450 ntBASIC0.4□□□□□ -2.35
MBD3O95983 AC090625.1-201ENST00000357130 210 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-34-201ENST00000362441 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-12-201ENST00000362583 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-29-201ENST00000362834 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-9-201ENST00000362912 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-21-201ENST00000362963 81 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-14-201ENST00000363090 81 ntBASIC0.39□□□□□ -2.35
MBD3O95983 RNU4-80P-201ENST00000363200 141 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-13-201ENST00000363358 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORA72.1-201ENST00000363485 129 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-41-201ENST00000363608 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-11-201ENST00000363616 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-5-201ENST00000363633 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-39-201ENST00000363694 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-4-201ENST00000363810 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-16-201ENST00000363887 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-6-201ENST00000363942 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-42-201ENST00000364273 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-15-201ENST00000364809 81 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-1-201ENST00000364961 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-26-201ENST00000365067 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-10-201ENST00000365073 81 ntBASIC0.39□□□□□ -2.35
MBD3O95983 RNU6-1138P-201ENST00000365359 106 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-43-201ENST00000365503 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-36-201ENST00000365629 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 RNY1P8-201ENST00000383970 114 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORA26.5-201ENST00000391215 123 ntBASIC0.39□□□□□ -2.35
MBD3O95983 MIR1302-11-201ENST00000408051 138 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 278.3 ms