Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.07□□□□□ -2.24
CYTIPO60759 AC245047.7-201ENST00000440265 293 ntBASIC1.07□□□□□ -2.24
CYTIPO60759 AC245047.8-201ENST00000456455 284 ntBASIC1.07□□□□□ -2.24
CYTIPO60759 snoU13.25-201ENST00000458945 104 ntBASIC1.07□□□□□ -2.24
CYTIPO60759 SNORD123-201ENST00000459473 70 ntBASIC1.07□□□□□ -2.24
CYTIPO60759 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.07□□□□□ -2.24
CYTIPO60759 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.07□□□□□ -2.24
CYTIPO60759 AL049861.1-201ENST00000603130 150 ntBASIC1.07□□□□□ -2.24
CYTIPO60759 AC099654.10-201ENST00000640395 161 ntBASIC1.07□□□□□ -2.24
CYTIPO60759 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CYTIPO60759 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
CYTIPO60759 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
CYTIPO60759 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CYTIPO60759 Y_RNA.133-201ENST00000363428 110 ntBASIC1.06□□□□□ -2.24
CYTIPO60759 Y_RNA.363-201ENST00000365529 113 ntBASIC1.06□□□□□ -2.24
CYTIPO60759 Y_RNA.572-201ENST00000384757 98 ntBASIC1.06□□□□□ -2.24
CYTIPO60759 RNA5SP496-201ENST00000391240 109 ntBASIC1.06□□□□□ -2.24
CYTIPO60759 RNU6-321P-201ENST00000410912 106 ntBASIC1.06□□□□□ -2.24
CYTIPO60759 SNORD2.1-201ENST00000458762 69 ntBASIC1.06□□□□□ -2.24
CYTIPO60759 MTCO2P24-201ENST00000515611 426 ntBASIC1.06□□□□□ -2.24
CYTIPO60759 RNU6-1053P-201ENST00000515930 101 ntBASIC1.06□□□□□ -2.24
CYTIPO60759 RNU6-1007P-201ENST00000516586 107 ntBASIC1.06□□□□□ -2.24
CYTIPO60759 AC012433.1-201ENST00000588916 398 ntBASIC1.06□□□□□ -2.24
CYTIPO60759 AC006006.1-201ENST00000603082 144 ntBASIC1.06□□□□□ -2.24
CYTIPO60759 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CYTIPO60759 Y_RNA.802-201ENST00000614892 130 ntBASIC1.06□□□□□ -2.24
CYTIPO60759 uc_338.4-201ENST00000616635 176 ntBASIC1.06□□□□□ -2.24
CYTIPO60759 Y_RNA.82-201ENST00000363000 102 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 Y_RNA.92-201ENST00000363043 102 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 Y_RNA.235-201ENST00000364412 102 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 RNU6-392P-201ENST00000364926 101 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 Y_RNA.306-201ENST00000365015 102 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 Y_RNA.312-201ENST00000365089 102 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 Y_RNA.322-201ENST00000365151 102 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 MIR222-201ENST00000384992 110 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 MIR520C-201ENST00000385005 87 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 MIR568-201ENST00000385036 95 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 RNU6-910P-201ENST00000390844 107 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 AC023449.1-201ENST00000454464 154 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 Y_RNA.650-201ENST00000459002 102 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 AC005840.1-201ENST00000498412 377 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 TRMT112P2-201ENST00000512910 132 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 SNORA31.4-201ENST00000516049 129 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 RNU7-149P-201ENST00000516739 59 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 Y_RNA.777-201ENST00000516982 102 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 AC090821.2-201ENST00000523552 176 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 MIR4764-201ENST00000580680 88 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 Y_RNA.771-201ENST00000598668 102 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 AC006441.5-201ENST00000612680 209 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 Y_RNA.789-201ENST00000622480 102 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 AL391516.1-201ENST00000554380 2449 ntBASIC1.05□□□□□ -2.24
CYTIPO60759 Y_RNA.24-201ENST00000362508 103 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 SNORA8.3-201ENST00000384679 139 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 SNORD28B-201ENST00000390993 75 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 RNU2-38P-201ENST00000410856 79 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 MRPL35P3-201ENST00000421557 364 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 MTCYBP9-201ENST00000431021 303 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.04□□□□□ -2.24
CYTIPO60759 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.04□□□□□ -2.24
CYTIPO60759 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 RNU7-41P-201ENST00000515917 61 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 RN7SKP164-201ENST00000516138 266 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 RNU6-1045P-201ENST00000516321 107 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 RNU6-830P-201ENST00000516353 107 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 RNU7-43P-201ENST00000516554 64 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 SNORA70.22-201ENST00000517160 124 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 AC100767.1-201ENST00000528178 123 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 AL391903.3-201ENST00000612158 163 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 Pinc.1-201ENST00000616452 154 ntBASIC1.04□□□□□ -2.24
CYTIPO60759 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CYTIPO60759 Y_RNA.242-201ENST00000364473 110 ntBASIC1.03□□□□□ -2.24
CYTIPO60759 MIR626-201ENST00000385032 94 ntBASIC1.03□□□□□ -2.24
CYTIPO60759 Y_RNA.590-201ENST00000410140 107 ntBASIC1.03□□□□□ -2.24
CYTIPO60759 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
CYTIPO60759 MIR5688-201ENST00000580619 83 ntBASIC1.03□□□□□ -2.24
CYTIPO60759 MIR548AR-201ENST00000582191 57 ntBASIC1.03□□□□□ -2.24
CYTIPO60759 AL353621.2-201ENST00000605340 133 ntBASIC1.03□□□□□ -2.24
CYTIPO60759 AC015726.2-201ENST00000620112 122 ntBASIC1.03□□□□□ -2.24
CYTIPO60759 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CYTIPO60759 Y_RNA.122-201ENST00000363331 96 ntBASIC1.02□□□□□ -2.25
CYTIPO60759 Y_RNA.229-201ENST00000364347 113 ntBASIC1.02□□□□□ -2.25
CYTIPO60759 RNU6-1138P-201ENST00000365359 106 ntBASIC1.02□□□□□ -2.25
CYTIPO60759 Y_RNA.587-201ENST00000391210 103 ntBASIC1.02□□□□□ -2.25
CYTIPO60759 SNORD127-201ENST00000458892 86 ntBASIC1.02□□□□□ -2.25
CYTIPO60759 SNORD77.4-201ENST00000516158 81 ntBASIC1.02□□□□□ -2.25
CYTIPO60759 Y_RNA.679-201ENST00000516416 91 ntBASIC1.02□□□□□ -2.25
CYTIPO60759 MIR4643-201ENST00000577473 78 ntBASIC1.02□□□□□ -2.25
CYTIPO60759 MIR4282-201ENST00000583613 67 ntBASIC1.02□□□□□ -2.25
CYTIPO60759 SNORA25.3-201ENST00000363205 127 ntBASIC1.01□□□□□ -2.25
CYTIPO60759 RNY1P10-201ENST00000363268 113 ntBASIC1.01□□□□□ -2.25
CYTIPO60759 Y_RNA.277-201ENST00000364754 102 ntBASIC1.01□□□□□ -2.25
CYTIPO60759 Y_RNA.288-201ENST00000364854 92 ntBASIC1.01□□□□□ -2.25
CYTIPO60759 RNU6-53P-201ENST00000365367 106 ntBASIC1.01□□□□□ -2.25
CYTIPO60759 Y_RNA.352-201ENST00000365439 102 ntBASIC1.01□□□□□ -2.25
CYTIPO60759 U8.17-201ENST00000391292 132 ntBASIC1.01□□□□□ -2.25
CYTIPO60759 MIR1285-1-201ENST00000408593 84 ntBASIC1.01□□□□□ -2.25
CYTIPO60759 AL591704.2-201ENST00000421658 181 ntBASIC1.01□□□□□ -2.25
CYTIPO60759 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.01□□□□□ -2.25
CYTIPO60759 RPS26P48-201ENST00000491713 339 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms