Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 SUMO2P16-201ENST00000519475 264 ntBASIC1.77□□□□□ -2.13
RRP9O43818 Y_RNA.783-201ENST00000613546 102 ntBASIC1.77□□□□□ -2.13
RRP9O43818 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.77□□□□□ -2.13
RRP9O43818 RNA5SP259-201ENST00000365541 109 ntBASIC1.76□□□□□ -2.13
RRP9O43818 Y_RNA.441-201ENST00000384123 112 ntBASIC1.76□□□□□ -2.13
RRP9O43818 SNORA67.3-201ENST00000384366 140 ntBASIC1.76□□□□□ -2.13
RRP9O43818 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.76□□□□□ -2.13
RRP9O43818 RNU5E-9P-201ENST00000411164 104 ntBASIC1.76□□□□□ -2.13
RRP9O43818 AC006461.1-201ENST00000412637 326 ntBASIC1.76□□□□□ -2.13
RRP9O43818 SNRPGP13-201ENST00000442212 177 ntBASIC1.76□□□□□ -2.13
RRP9O43818 RNU6-504P-201ENST00000516568 104 ntBASIC1.76□□□□□ -2.13
RRP9O43818 MIR1273D-201ENST00000577266 86 ntBASIC1.76□□□□□ -2.13
RRP9O43818 ICE2P2-201ENST00000483823 2787 ntBASIC1.75□□□□□ -2.13
RRP9O43818 U8.2-201ENST00000363156 134 ntBASIC1.75□□□□□ -2.13
RRP9O43818 Y_RNA.180-201ENST00000363867 113 ntBASIC1.75□□□□□ -2.13
RRP9O43818 SNORD24-201ENST00000383884 75 ntBASIC1.75□□□□□ -2.13
RRP9O43818 MIR548I3-201ENST00000408378 149 ntBASIC1.75□□□□□ -2.13
RRP9O43818 MIR548I1-201ENST00000408810 149 ntBASIC1.75□□□□□ -2.13
RRP9O43818 AC015922.2-201ENST00000435593 184 ntBASIC1.75□□□□□ -2.13
RRP9O43818 snoU13.9-201ENST00000458927 103 ntBASIC1.75□□□□□ -2.13
RRP9O43818 Y_RNA.666-201ENST00000516187 112 ntBASIC1.75□□□□□ -2.13
RRP9O43818 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.75□□□□□ -2.13
RRP9O43818 AC015688.6-201ENST00000577737 104 ntBASIC1.75□□□□□ -2.13
RRP9O43818 AL442644.1-201ENST00000454390 3105 ntBASIC1.74□□□□□ -2.13
RRP9O43818 Y_RNA.66-201ENST00000362862 102 ntBASIC1.74□□□□□ -2.13
RRP9O43818 RNU6-457P-201ENST00000363999 107 ntBASIC1.74□□□□□ -2.13
RRP9O43818 RNU1-42P-201ENST00000364033 160 ntBASIC1.74□□□□□ -2.13
RRP9O43818 RNU4-84P-201ENST00000364200 139 ntBASIC1.74□□□□□ -2.13
RRP9O43818 SNORA70B-201ENST00000384210 135 ntBASIC1.74□□□□□ -2.13
RRP9O43818 MIR548O-201ENST00000408583 114 ntBASIC1.74□□□□□ -2.13
RRP9O43818 AC005908.1-201ENST00000468701 347 ntBASIC1.74□□□□□ -2.13
RRP9O43818 AC090142.3-201ENST00000519012 385 ntBASIC1.74□□□□□ -2.13
RRP9O43818 MIR378D2-201ENST00000580636 98 ntBASIC1.74□□□□□ -2.13
RRP9O43818 AC106754.2-201ENST00000623006 233 ntBASIC1.74□□□□□ -2.13
RRP9O43818 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.74□□□□□ -2.13
RRP9O43818 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RRP9O43818 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RRP9O43818 MIR516B2-201ENST00000385190 85 ntBASIC1.73□□□□□ -2.13
RRP9O43818 MIR136-201ENST00000385207 82 ntBASIC1.73□□□□□ -2.13
RRP9O43818 RNU6-239P-201ENST00000390990 99 ntBASIC1.73□□□□□ -2.13
RRP9O43818 Z98742.3-201ENST00000418637 326 ntBASIC1.73□□□□□ -2.13
RRP9O43818 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.73□□□□□ -2.13
RRP9O43818 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.73□□□□□ -2.13
RRP9O43818 AC015726.2-201ENST00000620112 122 ntBASIC1.73□□□□□ -2.13
RRP9O43818 MIR8063-201ENST00000621930 81 ntBASIC1.73□□□□□ -2.13
RRP9O43818 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
RRP9O43818 RNU6-888P-201ENST00000363010 101 ntBASIC1.72□□□□□ -2.13
RRP9O43818 SNORD61-201ENST00000384252 73 ntBASIC1.72□□□□□ -2.13
RRP9O43818 MIR526A1-201ENST00000384897 85 ntBASIC1.72□□□□□ -2.13
RRP9O43818 RNU6-1135P-201ENST00000411083 103 ntBASIC1.72□□□□□ -2.13
RRP9O43818 RNU6-693P-201ENST00000516134 107 ntBASIC1.72□□□□□ -2.13
RRP9O43818 SNORD116-25-201ENST00000516517 92 ntBASIC1.72□□□□□ -2.13
RRP9O43818 RNU7-25P-201ENST00000516544 62 ntBASIC1.72□□□□□ -2.13
RRP9O43818 RNU6-1270P-201ENST00000517128 108 ntBASIC1.72□□□□□ -2.13
RRP9O43818 Y_RNA.272-201ENST00000364696 102 ntBASIC1.71□□□□□ -2.14
RRP9O43818 RNA5SP126-201ENST00000365092 109 ntBASIC1.71□□□□□ -2.14
RRP9O43818 Y_RNA.337-201ENST00000365312 102 ntBASIC1.71□□□□□ -2.14
RRP9O43818 SNORA2.2-201ENST00000365473 135 ntBASIC1.71□□□□□ -2.14
RRP9O43818 Y_RNA.521-201ENST00000384560 114 ntBASIC1.71□□□□□ -2.14
RRP9O43818 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
RRP9O43818 SNORA3.2-201ENST00000408221 125 ntBASIC1.71□□□□□ -2.14
RRP9O43818 RN7SKP223-201ENST00000410582 62 ntBASIC1.71□□□□□ -2.14
RRP9O43818 AC092991.1-201ENST00000477176 376 ntBASIC1.71□□□□□ -2.14
RRP9O43818 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.71□□□□□ -2.14
RRP9O43818 RNU6-830P-201ENST00000516353 107 ntBASIC1.71□□□□□ -2.14
RRP9O43818 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
RRP9O43818 Y_RNA.547-201ENST00000384654 119 ntBASIC1.7□□□□□ -2.14
RRP9O43818 SNORA11.2-201ENST00000408318 127 ntBASIC1.7□□□□□ -2.14
RRP9O43818 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.7□□□□□ -2.14
RRP9O43818 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.7□□□□□ -2.14
RRP9O43818 RNU6-322P-201ENST00000516010 103 ntBASIC1.7□□□□□ -2.14
RRP9O43818 RNU6-917P-201ENST00000516294 104 ntBASIC1.7□□□□□ -2.14
RRP9O43818 AC007751.1-201ENST00000529260 376 ntBASIC1.7□□□□□ -2.14
RRP9O43818 AC090049.2-201ENST00000550377 109 ntBASIC1.7□□□□□ -2.14
RRP9O43818 FAM106DP-201ENST00000586416 501 ntBASIC1.7□□□□□ -2.14
RRP9O43818 AC104465.1-201ENST00000611365 139 ntBASIC1.7□□□□□ -2.14
RRP9O43818 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.7□□□□□ -2.14
RRP9O43818 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.7□□□□□ -2.14
RRP9O43818 MIR219B-201ENST00000637023 88 ntBASIC1.7□□□□□ -2.14
RRP9O43818 AP000648.3-201ENST00000623539 4507 ntBASIC1.7□□□□□ -2.14
RRP9O43818 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RRP9O43818 MIR302D-201ENST00000362275 68 ntBASIC1.69□□□□□ -2.14
RRP9O43818 SNORD33-201ENST00000362761 85 ntBASIC1.69□□□□□ -2.14
RRP9O43818 RNU6-978P-201ENST00000364371 103 ntBASIC1.69□□□□□ -2.14
RRP9O43818 Y_RNA.393-201ENST00000383936 102 ntBASIC1.69□□□□□ -2.14
RRP9O43818 Y_RNA.464-201ENST00000384282 110 ntBASIC1.69□□□□□ -2.14
RRP9O43818 MIR548A2-201ENST00000384956 97 ntBASIC1.69□□□□□ -2.14
RRP9O43818 MIR518F-201ENST00000384973 87 ntBASIC1.69□□□□□ -2.14
RRP9O43818 MIR653-201ENST00000385279 96 ntBASIC1.69□□□□□ -2.14
RRP9O43818 RNU6-394P-201ENST00000410735 107 ntBASIC1.69□□□□□ -2.14
RRP9O43818 RNA5SP61-201ENST00000516453 100 ntBASIC1.69□□□□□ -2.14
RRP9O43818 RNU7-121P-201ENST00000516604 62 ntBASIC1.69□□□□□ -2.14
RRP9O43818 MIR4648-201ENST00000580107 72 ntBASIC1.69□□□□□ -2.14
RRP9O43818 SNORD115-28-201ENST00000363931 81 ntBASIC1.68□□□□□ -2.14
RRP9O43818 RNU6-597P-201ENST00000365620 102 ntBASIC1.68□□□□□ -2.14
RRP9O43818 AL445646.1-201ENST00000431784 216 ntBASIC1.68□□□□□ -2.14
RRP9O43818 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.68□□□□□ -2.14
RRP9O43818 AL365205.2-201ENST00000594586 68 ntBASIC1.68□□□□□ -2.14
RRP9O43818 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.67□□□□□ -2.14
RRP9O43818 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms