Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNU6-177P-201ENST00000411257 104 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 SNORD11-201ENST00000459124 84 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 AC091959.1-201ENST00000495857 238 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 RN7SKP12-201ENST00000516275 143 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 RNU6-830P-201ENST00000516353 107 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 RNU7-25P-201ENST00000516544 62 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 RNU4-77P-201ENST00000516692 156 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 MIR3612-201ENST00000579753 87 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 VN1R91P-201ENST00000594377 169 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 AC104695.3-201ENST00000604052 296 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 AL136317.1-201ENST00000612653 226 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.3□□□□□ -2.36
CHMP2AO43633 RNU6-934P-201ENST00000365154 107 ntBASIC0.29□□□□□ -2.36
CHMP2AO43633 MIR193B-201ENST00000384907 83 ntBASIC0.29□□□□□ -2.36
CHMP2AO43633 RNU7-116P-201ENST00000516940 62 ntBASIC0.29□□□□□ -2.36
CHMP2AO43633 Y_RNA.714-201ENST00000517065 90 ntBASIC0.29□□□□□ -2.36
CHMP2AO43633 AC092447.9-201ENST00000603395 144 ntBASIC0.29□□□□□ -2.36
CHMP2AO43633 PART1_1.1-201ENST00000611761 217 ntBASIC0.29□□□□□ -2.36
CHMP2AO43633 AC091925.1-201ENST00000623204 462 ntBASIC0.29□□□□□ -2.36
CHMP2AO43633 AC139792.2-201ENST00000624218 587 ntBASIC0.29□□□□□ -2.36
CHMP2AO43633 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 RNU6-580P-201ENST00000365159 107 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 RNU6-710P-201ENST00000410424 105 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 RNU6-383P-201ENST00000410864 94 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 RNU6-437P-201ENST00000459408 95 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 RNU2-13P-201ENST00000515909 113 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 RNU6-977P-201ENST00000516411 103 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 RNU6-911P-201ENST00000516523 104 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.28□□□□□ -2.36
CHMP2AO43633 MIR4804-201ENST00000581683 73 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 AC008608.1-201ENST00000603910 127 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 AC011373.1-201ENST00000607270 237 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 MIR1302-1-201ENST00000637932 143 ntBASIC0.28□□□□□ -2.36
CHMP2AO43633 RNU6-1115P-201ENST00000362490 106 ntBASIC0.27□□□□□ -2.37
CHMP2AO43633 Y_RNA.383-201ENST00000383855 97 ntBASIC0.27□□□□□ -2.37
CHMP2AO43633 Y_RNA.547-201ENST00000384654 119 ntBASIC0.27□□□□□ -2.37
CHMP2AO43633 RNU6-308P-201ENST00000390957 107 ntBASIC0.27□□□□□ -2.37
CHMP2AO43633 RNU6-679P-201ENST00000391003 106 ntBASIC0.27□□□□□ -2.37
CHMP2AO43633 HMGN1P33-201ENST00000432945 451 ntBASIC0.27□□□□□ -2.37
CHMP2AO43633 AC099799.1-201ENST00000439809 192 ntBASIC0.27□□□□□ -2.37
CHMP2AO43633 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.27□□□□□ -2.37
CHMP2AO43633 MIR4676-201ENST00000583078 72 ntBASIC0.27□□□□□ -2.37
CHMP2AO43633 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.27□□□□□ -2.37
CHMP2AO43633 AC010205.1-201ENST00000616668 449 ntBASIC0.27□□□□□ -2.37
CHMP2AO43633 MIR6740-201ENST00000618268 113 ntBASIC0.27□□□□□ -2.37
CHMP2AO43633 SNORD114-26-201ENST00000363543 72 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 Y_RNA.418-201ENST00000384029 102 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 SNORA72.4-201ENST00000384174 132 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 RNU6-102P-201ENST00000384485 104 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 Y_RNA.537-201ENST00000384626 109 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 Y_RNA.551-201ENST00000384661 102 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 RNU6-913P-201ENST00000390913 95 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 AC138393.2-201ENST00000414742 246 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 U8.19-201ENST00000459095 133 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 Y_RNA.632-201ENST00000459189 102 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 Y_RNA.666-201ENST00000516187 112 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 RNU6-1046P-201ENST00000516538 107 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 SNORA20.3-201ENST00000516880 132 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 SNORD116.3-201ENST00000517176 78 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 AC007751.1-201ENST00000529260 376 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 MIR4514-201ENST00000581410 57 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 AL132765.2-201ENST00000610812 351 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 AC006441.5-201ENST00000612680 209 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 AC010332.2-201ENST00000613083 1904 ntBASIC0.26□□□□□ -2.37
CHMP2AO43633 Y_RNA.5-201ENST00000362334 102 ntBASIC0.25□□□□□ -2.37
CHMP2AO43633 Y_RNA.58-201ENST00000362807 102 ntBASIC0.25□□□□□ -2.37
CHMP2AO43633 Y_RNA.142-201ENST00000363491 102 ntBASIC0.25□□□□□ -2.37
CHMP2AO43633 Y_RNA.154-201ENST00000363624 102 ntBASIC0.25□□□□□ -2.37
CHMP2AO43633 RNA5SP517-201ENST00000364724 117 ntBASIC0.25□□□□□ -2.37
CHMP2AO43633 RNY3P1-201ENST00000365085 102 ntBASIC0.25□□□□□ -2.37
CHMP2AO43633 RNY3-201ENST00000365484 102 ntBASIC0.25□□□□□ -2.37
CHMP2AO43633 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
CHMP2AO43633 Y_RNA.387-201ENST00000383918 102 ntBASIC0.25□□□□□ -2.37
CHMP2AO43633 Y_RNA.428-201ENST00000384078 102 ntBASIC0.25□□□□□ -2.37
CHMP2AO43633 AC098614.3-201ENST00000438957 440 ntBASIC0.25□□□□□ -2.37
CHMP2AO43633 RNU7-56P-201ENST00000458744 62 ntBASIC0.25□□□□□ -2.37
CHMP2AO43633 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.25□□□□□ -2.37
CHMP2AO43633 AL080274.1-201ENST00000605565 220 ntBASIC0.25□□□□□ -2.37
CHMP2AO43633 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.24□□□□□ -2.37
CHMP2AO43633 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.24□□□□□ -2.37
CHMP2AO43633 AC236972.2-201ENST00000434979 310 ntBASIC0.24□□□□□ -2.37
CHMP2AO43633 RNU7-62P-201ENST00000458856 62 ntBASIC0.24□□□□□ -2.37
CHMP2AO43633 RNU6-958P-201ENST00000516995 106 ntBASIC0.24□□□□□ -2.37
CHMP2AO43633 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.24□□□□□ -2.37
CHMP2AO43633 AC087685.1-201ENST00000587507 141 ntBASIC0.24□□□□□ -2.37
CHMP2AO43633 Y_RNA.772-201ENST00000606692 102 ntBASIC0.24□□□□□ -2.37
CHMP2AO43633 U6atac.1-201ENST00000616025 117 ntBASIC0.24□□□□□ -2.37
CHMP2AO43633 MIR924-201ENST00000638017 53 ntBASIC0.24□□□□□ -2.37
CHMP2AO43633 RNU6-674P-201ENST00000363831 107 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 Y_RNA.205-201ENST00000364128 113 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 Y_RNA.462-201ENST00000384268 102 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 RNU6-21P-201ENST00000384710 107 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 RNU6-763P-201ENST00000390865 106 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 MIR548O-201ENST00000408583 114 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 RNU6-1190P-201ENST00000410811 104 ntBASIC0.23□□□□□ -2.37
CHMP2AO43633 RNU6-847P-201ENST00000411115 108 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms