Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNU6-135P-201ENST00000516769 101 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 AC024405.2-202ENST00000532731 184 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 MIR4760-201ENST00000585040 80 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 MIR548AZ-201ENST00000616567 95 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 AC078883.4-201ENST00000623218 367 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 Z97988.1-201ENST00000637697 135 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 RNU6-626P-201ENST00000363354 107 ntBASIC-0.41□□□□□ -2.48
SGCEO43556 SNORD115-24-201ENST00000363528 82 ntBASIC-0.41□□□□□ -2.48
SGCEO43556 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.41□□□□□ -2.48
SGCEO43556 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.41□□□□□ -2.48
SGCEO43556 SNORD116-8-201ENST00000384365 95 ntBASIC-0.41□□□□□ -2.48
SGCEO43556 MIR196A2-201ENST00000385189 110 ntBASIC-0.41□□□□□ -2.48
SGCEO43556 SNORA26-201ENST00000391286 122 ntBASIC-0.41□□□□□ -2.48
SGCEO43556 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.41□□□□□ -2.48
SGCEO43556 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.41□□□□□ -2.48
SGCEO43556 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.41□□□□□ -2.48
SGCEO43556 RNU7-73P-201ENST00000458743 63 ntBASIC-0.41□□□□□ -2.48
SGCEO43556 AC127455.1-201ENST00000565496 145 ntBASIC-0.41□□□□□ -2.48
SGCEO43556 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.41□□□□□ -2.48
SGCEO43556 SNORD115-34-201ENST00000362441 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-12-201ENST00000362583 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-29-201ENST00000362834 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-9-201ENST00000362912 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-21-201ENST00000362963 81 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-14-201ENST00000363090 81 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 RNA5SP98-201ENST00000363158 137 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-13-201ENST00000363358 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-41-201ENST00000363608 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-11-201ENST00000363616 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-5-201ENST00000363633 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-39-201ENST00000363694 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-4-201ENST00000363810 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-16-201ENST00000363887 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-6-201ENST00000363942 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-42-201ENST00000364273 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-15-201ENST00000364809 81 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-1-201ENST00000364961 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-26-201ENST00000365067 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-10-201ENST00000365073 81 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-43-201ENST00000365503 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-36-201ENST00000365629 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 RNU6-20P-201ENST00000384106 107 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 AL603910.2-201ENST00000407268 136 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 MTND4LP11-201ENST00000422184 280 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 RNU6-470P-201ENST00000515954 104 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 RNU7-115P-201ENST00000516433 55 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 RNU6-307P-201ENST00000516743 106 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 SNORD115-40-201ENST00000606510 82 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 MIR8055-201ENST00000610739 97 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 AC092794.2-201ENST00000620933 563 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 MIR499B-201ENST00000636498 73 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 AC091304.10-201ENST00000641554 121 ntBASIC-0.42□□□□□ -2.48
SGCEO43556 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 SNORD72-201ENST00000390994 80 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 SNORD115-47-201ENST00000391226 86 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 SNORD75.1-201ENST00000408373 60 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.43□□□□□ -2.48
SGCEO43556 MTCO1P5-201ENST00000433573 344 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 POLR2KP2-201ENST00000438155 177 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 RPL39P34-201ENST00000477141 156 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 MTND5P5-201ENST00000503764 376 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 RNU6-958P-201ENST00000516995 106 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 AC011921.3-201ENST00000605540 361 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 MIR1244-1-201ENST00000612829 85 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 MIR1244-3-201ENST00000635744 85 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 MIR1244-2-201ENST00000636449 85 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 MIR1244-4-202ENST00000636813 85 ntBASIC-0.43□□□□□ -2.48
SGCEO43556 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 MIR106A-201ENST00000384870 81 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 MIR563-201ENST00000385080 79 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 SNORA75.4-201ENST00000391278 119 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 AC024067.1-201ENST00000426199 223 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 RPS29P8-201ENST00000445109 171 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 MTND1P1-201ENST00000445453 368 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 SNORD126-201ENST00000459475 77 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 AL080274.1-201ENST00000605565 220 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 AC022441.3-201ENST00000605737 136 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 RNU1-29P-201ENST00000606574 126 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 uc_338.22-201ENST00000622722 187 ntBASIC-0.44□□□□□ -2.48
SGCEO43556 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.45□□□□□ -2.48
SGCEO43556 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 RNU4-75P-201ENST00000364621 146 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 SNORD114-12-201ENST00000365400 75 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 RNU6-652P-201ENST00000365488 107 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 SNORA69.1-201ENST00000390904 137 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 RNU4-30P-201ENST00000410245 143 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 SUMO1P3-201ENST00000439961 304 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 PRDX4P1-201ENST00000507189 574 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.45□□□□□ -2.48
SGCEO43556 RNU7-53P-201ENST00000516705 60 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms