Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 MIR4431-201ENST00000579990 94 ntBASIC0.12□□□□□ -2.39
CLOCKO15516 DEFB117-201ENST00000602356 141 ntBASIC0.12□□□□□ -2.39
CLOCKO15516 AL080274.1-201ENST00000605565 220 ntBASIC0.12□□□□□ -2.39
CLOCKO15516 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.12□□□□□ -2.39
CLOCKO15516 MIR6718-201ENST00000616153 80 ntBASIC0.12□□□□□ -2.39
CLOCKO15516 AC138305.3-201ENST00000624988 240 ntBASIC0.12□□□□□ -2.39
CLOCKO15516 RNA5SP257-201ENST00000363023 116 ntBASIC0.11□□□□□ -2.39
CLOCKO15516 RNA5SP62-201ENST00000363457 110 ntBASIC0.11□□□□□ -2.39
CLOCKO15516 RNU6-674P-201ENST00000363831 107 ntBASIC0.11□□□□□ -2.39
CLOCKO15516 SNORA63C-201ENST00000364578 129 ntBASIC0.11□□□□□ -2.39
CLOCKO15516 Y_RNA.314-201ENST00000365114 102 ntBASIC0.11□□□□□ -2.39
CLOCKO15516 Y_RNA.331-201ENST00000365267 102 ntBASIC0.11□□□□□ -2.39
CLOCKO15516 RNU6-708P-201ENST00000384217 107 ntBASIC0.11□□□□□ -2.39
CLOCKO15516 SNORD100-201ENST00000408573 76 ntBASIC0.11□□□□□ -2.39
CLOCKO15516 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.11□□□□□ -2.39
CLOCKO15516 RNU7-62P-201ENST00000458856 62 ntBASIC0.11□□□□□ -2.39
CLOCKO15516 RNU6-437P-201ENST00000459408 95 ntBASIC0.11□□□□□ -2.39
CLOCKO15516 AC107297.1-201ENST00000459991 176 ntBASIC0.11□□□□□ -2.39
CLOCKO15516 AP003327.1-201ENST00000529684 127 ntBASIC0.11□□□□□ -2.39
CLOCKO15516 RPL23AP91-201ENST00000569211 455 ntBASIC0.11□□□□□ -2.39
CLOCKO15516 MIR2909-201ENST00000617113 69 ntBASIC0.11□□□□□ -2.39
CLOCKO15516 SNORD81.1-201ENST00000363064 77 ntBASIC0.1□□□□□ -2.39
CLOCKO15516 Y_RNA.374-201ENST00000365606 101 ntBASIC0.1□□□□□ -2.39
CLOCKO15516 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.1□□□□□ -2.39
CLOCKO15516 MIR1278-201ENST00000408753 81 ntBASIC0.1□□□□□ -2.39
CLOCKO15516 AC090844.1-201ENST00000422019 156 ntBASIC0.1□□□□□ -2.39
CLOCKO15516 MTATP6P26-201ENST00000445926 662 ntBASIC0.1□□□□□ -2.39
CLOCKO15516 MTND4P17-201ENST00000470444 350 ntBASIC0.1□□□□□ -2.39
CLOCKO15516 AL355297.3-201ENST00000604082 446 ntBASIC0.1□□□□□ -2.39
CLOCKO15516 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.1□□□□□ -2.39
CLOCKO15516 uc_338.16-201ENST00000621804 95 ntBASIC0.1□□□□□ -2.39
CLOCKO15516 Y_RNA.6-201ENST00000362350 114 ntBASIC0.09□□□□□ -2.4
CLOCKO15516 SNORA24-201ENST00000384096 131 ntBASIC0.09□□□□□ -2.4
CLOCKO15516 Y_RNA.462-201ENST00000384268 102 ntBASIC0.09□□□□□ -2.4
CLOCKO15516 Y_RNA.476-201ENST00000384347 108 ntBASIC0.09□□□□□ -2.4
CLOCKO15516 SNORA36B-201ENST00000410438 131 ntBASIC0.09□□□□□ -2.4
CLOCKO15516 BTF3P11-201ENST00000426582 477 ntBASIC0.09□□□□□ -2.4
CLOCKO15516 AC099799.1-201ENST00000439809 192 ntBASIC0.09□□□□□ -2.4
CLOCKO15516 RNU4-77P-201ENST00000516692 156 ntBASIC0.09□□□□□ -2.4
CLOCKO15516 RNA5SP94-201ENST00000516917 108 ntBASIC0.09□□□□□ -2.4
CLOCKO15516 AC090897.1-201ENST00000580909 226 ntBASIC0.09□□□□□ -2.4
CLOCKO15516 AC078938.1-201ENST00000620993 318 ntBASIC0.09□□□□□ -2.4
CLOCKO15516 RNU6-845P-201ENST00000362578 103 ntBASIC0.08□□□□□ -2.4
CLOCKO15516 Y_RNA.166-201ENST00000363730 102 ntBASIC0.08□□□□□ -2.4
CLOCKO15516 RNU4-50P-201ENST00000364361 141 ntBASIC0.08□□□□□ -2.4
CLOCKO15516 Y_RNA.251-201ENST00000364551 99 ntBASIC0.08□□□□□ -2.4
CLOCKO15516 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
CLOCKO15516 SNORD116-4-201ENST00000384733 96 ntBASIC0.08□□□□□ -2.4
CLOCKO15516 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
CLOCKO15516 MIR18B-201ENST00000454574 71 ntBASIC0.08□□□□□ -2.4
CLOCKO15516 SNORD11-201ENST00000459124 84 ntBASIC0.08□□□□□ -2.4
CLOCKO15516 AC091959.1-201ENST00000495857 238 ntBASIC0.08□□□□□ -2.4
CLOCKO15516 SNORA18.4-201ENST00000516440 124 ntBASIC0.08□□□□□ -2.4
CLOCKO15516 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.08□□□□□ -2.4
CLOCKO15516 AC010205.1-201ENST00000616668 449 ntBASIC0.08□□□□□ -2.4
CLOCKO15516 SNORD118-201ENST00000363593 134 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 RNU6-1319P-201ENST00000390855 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 RNU6-747P-201ENST00000390928 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 RNU6-241P-201ENST00000391148 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 RNU6-447P-201ENST00000410293 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 RNU6-1118P-201ENST00000410382 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 RNU6-1076P-201ENST00000410397 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 RNU6-355P-201ENST00000410427 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 RNU6-791P-201ENST00000410467 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 RNU6-705P-201ENST00000410601 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 RNU6-1100P-201ENST00000410691 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 RNU6-860P-201ENST00000410860 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 RNU6-1217P-201ENST00000411276 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 RNU6-785P-201ENST00000411324 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 AC236972.2-201ENST00000434979 310 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 VN1R91P-201ENST00000594377 169 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 U6.90-201ENST00000614007 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 AC134878.1-201ENST00000619901 243 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 U6.70-201ENST00000620287 104 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 MIR4315-1-201ENST00000636800 73 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 MIR4315-2-201ENST00000640925 73 ntBASIC0.07□□□□□ -2.4
CLOCKO15516 RNU6-490P-201ENST00000362985 107 ntBASIC0.06□□□□□ -2.4
CLOCKO15516 Y_RNA.318-201ENST00000365131 97 ntBASIC0.06□□□□□ -2.4
CLOCKO15516 RNU6-364P-201ENST00000384387 107 ntBASIC0.06□□□□□ -2.4
CLOCKO15516 Y_RNA.547-201ENST00000384654 119 ntBASIC0.06□□□□□ -2.4
CLOCKO15516 AC096644.2-201ENST00000429278 159 ntBASIC0.06□□□□□ -2.4
CLOCKO15516 RNU7-67P-201ENST00000459003 62 ntBASIC0.06□□□□□ -2.4
CLOCKO15516 RNU7-141P-201ENST00000459304 62 ntBASIC0.06□□□□□ -2.4
CLOCKO15516 RNU6-863P-201ENST00000515989 104 ntBASIC0.06□□□□□ -2.4
CLOCKO15516 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.06□□□□□ -2.4
CLOCKO15516 AC011373.1-201ENST00000607270 237 ntBASIC0.06□□□□□ -2.4
CLOCKO15516 uc_338.6-201ENST00000613544 171 ntBASIC0.06□□□□□ -2.4
CLOCKO15516 AC073869.6-201ENST00000640656 341 ntBASIC0.06□□□□□ -2.4
CLOCKO15516 SNORD38B-201ENST00000384690 67 ntBASIC0.05□□□□□ -2.4
CLOCKO15516 MIR125B2-201ENST00000385128 89 ntBASIC0.05□□□□□ -2.4
CLOCKO15516 RNU7-102P-201ENST00000458948 62 ntBASIC0.05□□□□□ -2.4
CLOCKO15516 Y_RNA.653-201ENST00000459091 95 ntBASIC0.05□□□□□ -2.4
CLOCKO15516 RNU7-25P-201ENST00000516544 62 ntBASIC0.05□□□□□ -2.4
CLOCKO15516 AC069113.3-201ENST00000521019 150 ntBASIC0.05□□□□□ -2.4
CLOCKO15516 AC008608.1-201ENST00000603910 127 ntBASIC0.05□□□□□ -2.4
CLOCKO15516 Y_RNA.772-201ENST00000606692 102 ntBASIC0.05□□□□□ -2.4
CLOCKO15516 SNORA25.18-201ENST00000607153 114 ntBASIC0.05□□□□□ -2.4
CLOCKO15516 AC084782.3-201ENST00000612282 578 ntBASIC0.05□□□□□ -2.4
CLOCKO15516 AC022306.2-201ENST00000617563 647 ntBASIC0.05□□□□□ -2.4
CLOCKO15516 SNORD38B-202ENST00000625943 69 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms