Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SNRPGP14-201ENST00000435400 219 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.77□□□□□ -2.29
PDLIM1O00151 FABP5P4-201ENST00000437203 171 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.77□□□□□ -2.29
PDLIM1O00151 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.77□□□□□ -2.29
PDLIM1O00151 RNU6-830P-201ENST00000516353 107 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 RNU2-31P-201ENST00000516954 155 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.77□□□□□ -2.29
PDLIM1O00151 MIR4452-201ENST00000583004 71 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.77□□□□□ -2.29
PDLIM1O00151 FAM71BP1-201ENST00000604431 523 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 Y_RNA.214-201ENST00000364201 112 ntBASIC0.76□□□□□ -2.29
PDLIM1O00151 MIR520E-201ENST00000384867 87 ntBASIC0.76□□□□□ -2.29
PDLIM1O00151 RNU6-121P-201ENST00000410525 99 ntBASIC0.76□□□□□ -2.29
PDLIM1O00151 RPS3AP1-201ENST00000413190 320 ntBASIC0.76□□□□□ -2.29
PDLIM1O00151 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.76□□□□□ -2.29
PDLIM1O00151 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.76□□□□□ -2.29
PDLIM1O00151 MTND4LP30-201ENST00000454092 297 ntBASIC0.76□□□□□ -2.29
PDLIM1O00151 SNORD11-201ENST00000459124 84 ntBASIC0.76□□□□□ -2.29
PDLIM1O00151 PSMC1P5-201ENST00000512850 177 ntBASIC0.76□□□□□ -2.29
PDLIM1O00151 RN7SKP164-201ENST00000516138 266 ntBASIC0.76□□□□□ -2.29
PDLIM1O00151 Y_RNA.711-201ENST00000516993 102 ntBASIC0.76□□□□□ -2.29
PDLIM1O00151 RNU7-181P-201ENST00000517234 74 ntBASIC0.76□□□□□ -2.29
PDLIM1O00151 AC131281.1-201ENST00000522984 164 ntBASIC0.76□□□□□ -2.29
PDLIM1O00151 AC109810.1-201ENST00000534066 224 ntBASIC0.76□□□□□ -2.29
PDLIM1O00151 MIR3171-201ENST00000584270 74 ntBASIC0.76□□□□□ -2.29
PDLIM1O00151 AC131055.1-201ENST00000584626 316 ntBASIC0.76□□□□□ -2.29
PDLIM1O00151 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.75□□□□□ -2.29
PDLIM1O00151 Y_RNA.216-201ENST00000364205 93 ntBASIC0.75□□□□□ -2.29
PDLIM1O00151 Y_RNA.293-201ENST00000364908 93 ntBASIC0.75□□□□□ -2.29
PDLIM1O00151 SNORA1.2-201ENST00000365189 134 ntBASIC0.75□□□□□ -2.29
PDLIM1O00151 Y_RNA.370-201ENST00000365589 108 ntBASIC0.75□□□□□ -2.29
PDLIM1O00151 MIR215-201ENST00000384858 110 ntBASIC0.75□□□□□ -2.29
PDLIM1O00151 AL603910.2-201ENST00000407268 136 ntBASIC0.75□□□□□ -2.29
PDLIM1O00151 RNU6-383P-201ENST00000410864 94 ntBASIC0.75□□□□□ -2.29
PDLIM1O00151 RNA5SP247-201ENST00000411181 105 ntBASIC0.75□□□□□ -2.29
PDLIM1O00151 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.75□□□□□ -2.29
PDLIM1O00151 Y_RNA.637-201ENST00000459424 114 ntBASIC0.75□□□□□ -2.29
PDLIM1O00151 RNU11-2P-201ENST00000516898 142 ntBASIC0.75□□□□□ -2.29
PDLIM1O00151 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
PDLIM1O00151 AL355297.3-201ENST00000604082 446 ntBASIC0.75□□□□□ -2.29
PDLIM1O00151 AC006441.5-201ENST00000612680 209 ntBASIC0.75□□□□□ -2.29
PDLIM1O00151 AC013791.1-201ENST00000616619 62 ntBASIC0.75□□□□□ -2.29
PDLIM1O00151 MIR367-201ENST00000362299 68 ntBASIC0.74□□□□□ -2.29
PDLIM1O00151 Y_RNA.202-201ENST00000364083 110 ntBASIC0.74□□□□□ -2.29
PDLIM1O00151 SNORA51.10-201ENST00000384418 136 ntBASIC0.74□□□□□ -2.29
PDLIM1O00151 Y_RNA.541-201ENST00000384640 113 ntBASIC0.74□□□□□ -2.29
PDLIM1O00151 MIR1287-201ENST00000408492 90 ntBASIC0.74□□□□□ -2.29
PDLIM1O00151 AC005534.2-201ENST00000431047 433 ntBASIC0.74□□□□□ -2.29
PDLIM1O00151 RNU6-1143P-201ENST00000516125 104 ntBASIC0.74□□□□□ -2.29
PDLIM1O00151 MIR5692C2-201ENST00000577959 77 ntBASIC0.74□□□□□ -2.29
PDLIM1O00151 AC113195.1-201ENST00000579952 141 ntBASIC0.74□□□□□ -2.29
PDLIM1O00151 AC012433.1-201ENST00000588916 398 ntBASIC0.74□□□□□ -2.29
PDLIM1O00151 snoU2_19.2-201ENST00000363024 80 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 RNU6-797P-201ENST00000363101 109 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 RNU6-806P-201ENST00000365147 105 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 RNU6-326P-201ENST00000365480 107 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 RNU6-662P-201ENST00000384253 104 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 MIR608-201ENST00000384820 100 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 MIR100-201ENST00000385259 80 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 RNA5SP496-201ENST00000391240 109 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 Y_RNA.604-201ENST00000410574 102 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 RPL21P38-201ENST00000418090 167 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 BTF3P11-201ENST00000426582 477 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 SCARNA8-201ENST00000515924 131 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 RNA5SP255-201ENST00000516370 107 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 MIR4724-201ENST00000579485 89 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 AL049861.1-201ENST00000603130 150 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 AC106800.4-201ENST00000614905 153 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 AL442644.1-201ENST00000454390 3105 ntBASIC0.73□□□□□ -2.29
PDLIM1O00151 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.72□□□□□ -2.29
PDLIM1O00151 RNU6-1272P-201ENST00000362776 107 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 Y_RNA.64-201ENST00000362845 102 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 SNORD89-201ENST00000390981 114 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 SNORD111-201ENST00000408139 94 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 RNU6-994P-201ENST00000410507 111 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 RNU6-733P-201ENST00000410759 104 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 AC067940.1-201ENST00000458411 300 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 AC091959.1-201ENST00000495857 238 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 RNU6-197P-201ENST00000516680 100 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 RNU7-149P-201ENST00000516739 59 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 AP003733.2-201ENST00000529409 171 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 AC004817.2-201ENST00000561794 651 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 MIR4680-201ENST00000580906 66 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 uc_338.4-201ENST00000616635 176 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 AC022140.2-201ENST00000623500 188 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 MIR6516-201ENST00000630554 81 ntBASIC0.72□□□□□ -2.29
PDLIM1O00151 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
PDLIM1O00151 SNORD113.3-201ENST00000364630 78 ntBASIC0.71□□□□□ -2.3
PDLIM1O00151 RNU6-396P-201ENST00000365369 105 ntBASIC0.71□□□□□ -2.3
PDLIM1O00151 SNORA2B-201ENST00000384583 137 ntBASIC0.71□□□□□ -2.3
PDLIM1O00151 Y_RNA.537-201ENST00000384626 109 ntBASIC0.71□□□□□ -2.3
PDLIM1O00151 AC004941.2-201ENST00000427009 228 ntBASIC0.71□□□□□ -2.3
PDLIM1O00151 AL392103.1-201ENST00000447000 198 ntBASIC0.71□□□□□ -2.3
PDLIM1O00151 AC107297.1-201ENST00000459991 176 ntBASIC0.71□□□□□ -2.3
PDLIM1O00151 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.71□□□□□ -2.3
PDLIM1O00151 SNORA27.4-201ENST00000516650 95 ntBASIC0.71□□□□□ -2.3
PDLIM1O00151 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.71□□□□□ -2.3
PDLIM1O00151 AC036111.3-201ENST00000526389 112 ntBASIC0.71□□□□□ -2.3
PDLIM1O00151 AC020661.2-201ENST00000560114 134 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms