Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC243829.6-201ENST00000612652 106 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD38B-202ENST00000625943 69 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
SMKR1H3BMG3 Y_RNA.383-201ENST00000383855 97 ntBASIC0.12□□□□□ -2.39
SMKR1H3BMG3 Y_RNA.387-201ENST00000383918 102 ntBASIC0.12□□□□□ -2.39
SMKR1H3BMG3 Y_RNA.463-201ENST00000384271 102 ntBASIC0.12□□□□□ -2.39
SMKR1H3BMG3 Y_RNA.494-201ENST00000384432 111 ntBASIC0.12□□□□□ -2.39
SMKR1H3BMG3 MIR548O-201ENST00000408583 114 ntBASIC0.12□□□□□ -2.39
SMKR1H3BMG3 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.12□□□□□ -2.39
SMKR1H3BMG3 Y_RNA.713-201ENST00000517013 96 ntBASIC0.12□□□□□ -2.39
SMKR1H3BMG3 AC092794.1-201ENST00000612734 582 ntBASIC0.12□□□□□ -2.39
SMKR1H3BMG3 AL138825.1-201ENST00000618587 192 ntBASIC0.12□□□□□ -2.39
SMKR1H3BMG3 uc_338.16-201ENST00000621804 95 ntBASIC0.12□□□□□ -2.39
SMKR1H3BMG3 AC022140.2-201ENST00000623500 188 ntBASIC0.12□□□□□ -2.39
SMKR1H3BMG3 MTND4LP32-201ENST00000636111 270 ntBASIC0.12□□□□□ -2.39
SMKR1H3BMG3 RNA5SP62-201ENST00000363457 110 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 Y_RNA.241-201ENST00000364470 117 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 Y_RNA.439-201ENST00000384119 94 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-937P-201ENST00000384325 106 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-364P-201ENST00000384387 107 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-1319P-201ENST00000390855 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-747P-201ENST00000390928 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-241P-201ENST00000391148 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 SNORA26.5-201ENST00000391215 123 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-447P-201ENST00000410293 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-1118P-201ENST00000410382 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-1076P-201ENST00000410397 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-355P-201ENST00000410427 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-791P-201ENST00000410467 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-705P-201ENST00000410601 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-1100P-201ENST00000410691 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-860P-201ENST00000410860 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-1217P-201ENST00000411276 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-785P-201ENST00000411324 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 POLR2KP2-201ENST00000438155 177 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-1170P-201ENST00000515974 106 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNA5SP94-201ENST00000516917 108 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU6-958P-201ENST00000516995 106 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 MIR4431-201ENST00000579990 94 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 uc_338.6-201ENST00000613544 171 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 U6.90-201ENST00000614007 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.11□□□□□ -2.39
SMKR1H3BMG3 MIR6740-201ENST00000618268 113 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 U6.70-201ENST00000620287 104 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 AC010332.2-201ENST00000613083 1904 ntBASIC0.11□□□□□ -2.39
SMKR1H3BMG3 RNU4-80P-201ENST00000363200 141 ntBASIC0.1□□□□□ -2.39
SMKR1H3BMG3 SNORD118-201ENST00000363593 134 ntBASIC0.1□□□□□ -2.39
SMKR1H3BMG3 RNY3-201ENST00000365484 102 ntBASIC0.1□□□□□ -2.39
SMKR1H3BMG3 SNORD116-29-201ENST00000384516 83 ntBASIC0.1□□□□□ -2.39
SMKR1H3BMG3 MIR125B2-201ENST00000385128 89 ntBASIC0.1□□□□□ -2.39
SMKR1H3BMG3 RNY4P36-201ENST00000391116 96 ntBASIC0.1□□□□□ -2.39
SMKR1H3BMG3 RNU7-73P-201ENST00000458743 63 ntBASIC0.1□□□□□ -2.39
SMKR1H3BMG3 RNU7-102P-201ENST00000458948 62 ntBASIC0.1□□□□□ -2.39
SMKR1H3BMG3 AC010655.3-201ENST00000478818 450 ntBASIC0.1□□□□□ -2.39
SMKR1H3BMG3 AC108729.3-201ENST00000513484 108 ntBASIC0.1□□□□□ -2.39
SMKR1H3BMG3 AC008608.1-201ENST00000603910 127 ntBASIC0.1□□□□□ -2.39
SMKR1H3BMG3 MIR8055-201ENST00000610739 97 ntBASIC0.1□□□□□ -2.39
SMKR1H3BMG3 AC078938.1-201ENST00000620993 318 ntBASIC0.1□□□□□ -2.39
SMKR1H3BMG3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.39
SMKR1H3BMG3 Y_RNA.39-201ENST00000362620 98 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 RNU6-899P-201ENST00000363947 107 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 RNU6-144P-201ENST00000383951 107 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 AC087499.4-201ENST00000448505 178 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 U8.20-201ENST00000459445 131 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 SEPT14P8-201ENST00000508026 178 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 SNORA40.14-201ENST00000516543 86 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 RNU7-149P-201ENST00000516739 59 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.718-201ENST00000517110 102 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 MIR4498-201ENST00000577599 66 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 SNORD92-201ENST00000585078 85 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 SNORD113-5-201ENST00000607261 78 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 U6atac.1-201ENST00000616025 117 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 Z97988.1-201ENST00000637697 135 ntBASIC0.09□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.143-201ENST00000363520 106 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.248-201ENST00000364501 109 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 RNA5SP117-201ENST00000365294 118 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 SNORD114-22-201ENST00000365423 72 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 MIR588-201ENST00000384900 83 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 MIR518F-201ENST00000384973 87 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 SNORA40.5-201ENST00000391061 128 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 AL160004.2-201ENST00000432935 350 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 RNU7-185P-201ENST00000459215 60 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 RNU6-863P-201ENST00000515989 104 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 RNU7-156P-201ENST00000517214 74 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.08□□□□□ -2.4
SMKR1H3BMG3 AC092447.9-201ENST00000603395 144 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 AP000942.4-201ENST00000604811 241 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 SNORA25.18-201ENST00000607153 114 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.187-201ENST00000363918 113 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 SNORD115-28-201ENST00000363931 81 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 RNU6-1138P-201ENST00000365359 106 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.384-201ENST00000383909 102 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 SNORA8.2-201ENST00000384372 139 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 RNU6-913P-201ENST00000390913 95 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms