Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 RNU4-77P-201ENST00000516692 156 ntBASIC0.06□□□□□ -2.4
TRBV11-1A0A0K0K1C0 AP003327.1-201ENST00000529684 127 ntBASIC0.06□□□□□ -2.4
TRBV11-1A0A0K0K1C0 MIR4431-201ENST00000579990 94 ntBASIC0.06□□□□□ -2.4
TRBV11-1A0A0K0K1C0 DEFB117-201ENST00000602356 141 ntBASIC0.06□□□□□ -2.4
TRBV11-1A0A0K0K1C0 U6.90-201ENST00000614007 104 ntBASIC0.06□□□□□ -2.4
TRBV11-1A0A0K0K1C0 AC134878.1-201ENST00000619901 243 ntBASIC0.06□□□□□ -2.4
TRBV11-1A0A0K0K1C0 U6.70-201ENST00000620287 104 ntBASIC0.06□□□□□ -2.4
TRBV11-1A0A0K0K1C0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
TRBV11-1A0A0K0K1C0 RNU6-623P-201ENST00000363143 105 ntBASIC0.05□□□□□ -2.4
TRBV11-1A0A0K0K1C0 SNORA63C-201ENST00000364578 129 ntBASIC0.05□□□□□ -2.4
TRBV11-1A0A0K0K1C0 Y_RNA.570-201ENST00000384750 101 ntBASIC0.05□□□□□ -2.4
TRBV11-1A0A0K0K1C0 MIR1295A-201ENST00000408463 79 ntBASIC0.05□□□□□ -2.4
TRBV11-1A0A0K0K1C0 Y_RNA.646-201ENST00000410980 101 ntBASIC0.05□□□□□ -2.4
TRBV11-1A0A0K0K1C0 AC236972.2-201ENST00000434979 310 ntBASIC0.05□□□□□ -2.4
TRBV11-1A0A0K0K1C0 Y_RNA.635-201ENST00000459041 101 ntBASIC0.05□□□□□ -2.4
TRBV11-1A0A0K0K1C0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.05□□□□□ -2.4
TRBV11-1A0A0K0K1C0 MIR5690-201ENST00000583739 73 ntBASIC0.05□□□□□ -2.4
TRBV11-1A0A0K0K1C0 AL355297.3-201ENST00000604082 446 ntBASIC0.05□□□□□ -2.4
TRBV11-1A0A0K0K1C0 U6.92-201ENST00000636464 89 ntBASIC0.05□□□□□ -2.4
TRBV11-1A0A0K0K1C0 Y_RNA.115-201ENST00000363272 98 ntBASIC0.04□□□□□ -2.4
TRBV11-1A0A0K0K1C0 RNA5SP63-201ENST00000391225 112 ntBASIC0.04□□□□□ -2.4
TRBV11-1A0A0K0K1C0 AL603910.2-201ENST00000407268 136 ntBASIC0.04□□□□□ -2.4
TRBV11-1A0A0K0K1C0 RNU4-14P-201ENST00000410858 122 ntBASIC0.04□□□□□ -2.4
TRBV11-1A0A0K0K1C0 RNU6-370P-201ENST00000411008 104 ntBASIC0.04□□□□□ -2.4
TRBV11-1A0A0K0K1C0 AF228730.4-201ENST00000421457 183 ntBASIC0.04□□□□□ -2.4
TRBV11-1A0A0K0K1C0 AC090844.1-201ENST00000422019 156 ntBASIC0.04□□□□□ -2.4
TRBV11-1A0A0K0K1C0 AC090897.1-201ENST00000580909 226 ntBASIC0.04□□□□□ -2.4
TRBV11-1A0A0K0K1C0 MIR4315-1-201ENST00000636800 73 ntBASIC0.04□□□□□ -2.4
TRBV11-1A0A0K0K1C0 MIR4315-2-201ENST00000640925 73 ntBASIC0.04□□□□□ -2.4
TRBV11-1A0A0K0K1C0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.04□□□□□ -2.4
TRBV11-1A0A0K0K1C0 AC010332.2-201ENST00000613083 1904 ntBASIC0.03□□□□□ -2.4
TRBV11-1A0A0K0K1C0 Y_RNA.27-201ENST00000362540 103 ntBASIC0.03□□□□□ -2.4
TRBV11-1A0A0K0K1C0 RNA5SP117-201ENST00000365294 118 ntBASIC0.03□□□□□ -2.4
TRBV11-1A0A0K0K1C0 RNU6-708P-201ENST00000384217 107 ntBASIC0.03□□□□□ -2.4
TRBV11-1A0A0K0K1C0 RNU6-1215P-201ENST00000384441 102 ntBASIC0.03□□□□□ -2.4
TRBV11-1A0A0K0K1C0 RNU6-310P-201ENST00000384655 107 ntBASIC0.03□□□□□ -2.4
TRBV11-1A0A0K0K1C0 SNORD38B-201ENST00000384690 67 ntBASIC0.03□□□□□ -2.4
TRBV11-1A0A0K0K1C0 SNORA36B-201ENST00000410438 131 ntBASIC0.03□□□□□ -2.4
TRBV11-1A0A0K0K1C0 MTND4P17-201ENST00000470444 350 ntBASIC0.03□□□□□ -2.4
TRBV11-1A0A0K0K1C0 AC069113.3-201ENST00000521019 150 ntBASIC0.03□□□□□ -2.4
TRBV11-1A0A0K0K1C0 AC098679.4-201ENST00000624241 654 ntBASIC0.03□□□□□ -2.4
TRBV11-1A0A0K0K1C0 SNORD38B-202ENST00000625943 69 ntBASIC0.03□□□□□ -2.4
TRBV11-1A0A0K0K1C0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.03□□□□□ -2.4
TRBV11-1A0A0K0K1C0 SNORD118-201ENST00000363593 134 ntBASIC0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU6-815P-201ENST00000384080 113 ntBASIC0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU6-890P-201ENST00000384121 107 ntBASIC0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 BTF3P11-201ENST00000426582 477 ntBASIC0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 AC096644.2-201ENST00000429278 159 ntBASIC0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 MIR18B-201ENST00000454574 71 ntBASIC0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU7-102P-201ENST00000458948 62 ntBASIC0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU6-911P-201ENST00000516523 104 ntBASIC0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 AC008608.1-201ENST00000603910 127 ntBASIC0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 uc_338.6-201ENST00000613544 171 ntBASIC0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNA5SP325-201ENST00000363756 130 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 Y_RNA.241-201ENST00000364470 117 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 SNORA8.2-201ENST00000384372 139 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 Y_RNA.567-201ENST00000384736 106 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 MIR518F-201ENST00000384973 87 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 MIR125B2-201ENST00000385128 89 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 MIR1257-201ENST00000408490 117 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 AC091959.1-201ENST00000495857 238 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU6-958P-201ENST00000516995 106 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU7-156P-201ENST00000517214 74 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 MIR3678-201ENST00000578455 94 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 AC080013.6-201ENST00000606185 215 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 AC078938.1-201ENST00000620993 318 ntBASIC0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU6-1188P-201ENST00000363795 107 ntBASIC0□□□□□ -2.41
TRBV11-1A0A0K0K1C0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0□□□□□ -2.41
TRBV11-1A0A0K0K1C0 Y_RNA.599-201ENST00000410489 109 ntBASIC0□□□□□ -2.41
TRBV11-1A0A0K0K1C0 AC023449.1-201ENST00000454464 154 ntBASIC0□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU6-863P-201ENST00000515989 104 ntBASIC0□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU7-25P-201ENST00000516544 62 ntBASIC0□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU7-110P-201ENST00000516891 62 ntBASIC0□□□□□ -2.41
TRBV11-1A0A0K0K1C0 MIR3145-201ENST00000580727 82 ntBASIC0□□□□□ -2.41
TRBV11-1A0A0K0K1C0 AC011373.1-201ENST00000607270 237 ntBASIC0□□□□□ -2.41
TRBV11-1A0A0K0K1C0 MIR6740-201ENST00000618268 113 ntBASIC0□□□□□ -2.41
TRBV11-1A0A0K0K1C0 AL109933.3-201ENST00000619095 188 ntBASIC0□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU6-674P-201ENST00000363831 107 ntBASIC-0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 AL589823.1-201ENST00000429577 183 ntBASIC-0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 SNORD11-201ENST00000459124 84 ntBASIC-0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU7-185P-201ENST00000459215 60 ntBASIC-0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 AC069439.1-201ENST00000494739 167 ntBASIC-0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 AC112693.2-201ENST00000556538 232 ntBASIC-0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 MIR2909-201ENST00000617113 69 ntBASIC-0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 AC022306.2-201ENST00000617563 647 ntBASIC-0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.01□□□□□ -2.41
TRBV11-1A0A0K0K1C0 SNORD81.1-201ENST00000363064 77 ntBASIC-0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 MIR548O-201ENST00000408583 114 ntBASIC-0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 AC099799.1-201ENST00000439809 192 ntBASIC-0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU7-141P-201ENST00000459304 62 ntBASIC-0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU6-358P-201ENST00000516564 75 ntBASIC-0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 MIR4423-201ENST00000580922 80 ntBASIC-0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.02□□□□□ -2.41
TRBV11-1A0A0K0K1C0 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 538.9 ms