Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 RNU6-674P-201ENST00000363831 107 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-815P-201ENST00000384080 113 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 SNORA24-201ENST00000384096 131 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 SNORA8.2-201ENST00000384372 139 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-1319P-201ENST00000390855 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-747P-201ENST00000390928 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-241P-201ENST00000391148 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR1257-201ENST00000408490 117 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-447P-201ENST00000410293 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-1118P-201ENST00000410382 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-1076P-201ENST00000410397 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-355P-201ENST00000410427 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-791P-201ENST00000410467 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-705P-201ENST00000410601 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-1100P-201ENST00000410691 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-860P-201ENST00000410860 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-1217P-201ENST00000411276 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-785P-201ENST00000411324 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC099799.1-201ENST00000439809 192 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR18B-201ENST00000454574 71 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU7-141P-201ENST00000459304 62 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU7-110P-201ENST00000516891 62 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC006600.1-201ENST00000572529 153 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 U6.90-201ENST00000614007 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 U6.70-201ENST00000620287 104 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 AC078938.1-201ENST00000620993 318 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR4315-1-201ENST00000636800 73 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 MIR4315-2-201ENST00000640925 73 ntBASIC0.03□□□□□ -2.4
IGHV3-43A0A0B4J1X8 RNU6-1048P-201ENST00000364054 107 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 Y_RNA.241-201ENST00000364470 117 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 Y_RNA.269-201ENST00000364685 89 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 Y_RNA.318-201ENST00000365131 97 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 Y_RNA.547-201ENST00000384654 119 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD38B-201ENST00000384690 67 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 Y_RNA.567-201ENST00000384736 106 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 MIR518F-201ENST00000384973 87 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 MIR125B2-201ENST00000385128 89 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 MIR548O-201ENST00000408583 114 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 MTATP6P26-201ENST00000445926 662 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 AC069113.3-201ENST00000521019 150 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 AC005357.1-201ENST00000588399 301 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 RAC1P9-201ENST00000604990 392 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 AC011373.1-201ENST00000607270 237 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 AC022306.2-201ENST00000617563 647 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD38B-202ENST00000625943 69 ntBASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.02□□□□□ -2.41
IGHV3-43A0A0B4J1X8 Y_RNA.6-201ENST00000362350 114 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-34-201ENST00000362441 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 RNU6-845P-201ENST00000362578 103 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-12-201ENST00000362583 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-29-201ENST00000362834 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-9-201ENST00000362912 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-21-201ENST00000362963 81 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-14-201ENST00000363090 81 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-13-201ENST00000363358 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-41-201ENST00000363608 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-11-201ENST00000363616 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-5-201ENST00000363633 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-39-201ENST00000363694 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-4-201ENST00000363810 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-16-201ENST00000363887 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-6-201ENST00000363942 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-42-201ENST00000364273 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 RNU4-50P-201ENST00000364361 141 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 RNU4-67P-201ENST00000364569 141 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-15-201ENST00000364809 81 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-1-201ENST00000364961 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-26-201ENST00000365067 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-10-201ENST00000365073 81 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 RNA5SP117-201ENST00000365294 118 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-43-201ENST00000365503 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-36-201ENST00000365629 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 Y_RNA.462-201ENST00000384268 102 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 RNU6-1165P-201ENST00000410119 107 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 Y_RNA.653-201ENST00000459091 95 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 RNU7-185P-201ENST00000459215 60 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 snoU13.18-201ENST00000459483 104 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 RNU6-958P-201ENST00000516995 106 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 RNU7-156P-201ENST00000517214 74 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 MIR3678-201ENST00000578455 94 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 VN1R91P-201ENST00000594377 169 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD115-40-201ENST00000606510 82 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 AC133104.2-201ENST00000615272 193 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 PVT1_3.1-201ENST00000620853 95 ntBASIC0.01□□□□□ -2.41
IGHV3-43A0A0B4J1X8 RNU6-490P-201ENST00000362985 107 ntBASIC0□□□□□ -2.41
IGHV3-43A0A0B4J1X8 Y_RNA.166-201ENST00000363730 102 ntBASIC0□□□□□ -2.41
IGHV3-43A0A0B4J1X8 Y_RNA.355-201ENST00000365462 98 ntBASIC0□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORA72.4-201ENST00000384174 132 ntBASIC0□□□□□ -2.41
IGHV3-43A0A0B4J1X8 Y_RNA.494-201ENST00000384432 111 ntBASIC0□□□□□ -2.41
IGHV3-43A0A0B4J1X8 SNORD116-4-201ENST00000384733 96 ntBASIC0□□□□□ -2.41
IGHV3-43A0A0B4J1X8 MIR588-201ENST00000384900 83 ntBASIC0□□□□□ -2.41
IGHV3-43A0A0B4J1X8 RNU2-14P-201ENST00000411053 191 ntBASIC0□□□□□ -2.41
IGHV3-43A0A0B4J1X8 RNU6-863P-201ENST00000515989 104 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 219.6 ms