Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SCOCP1-201ENST00000554676 349 ntBASIC-1.78□□□□□ -2.69
AP4S1Q9Y587 RNU4-28P-201ENST00000364739 141 ntBASIC-1.79□□□□□ -2.7
AP4S1Q9Y587 AC074085.1-201ENST00000413598 418 ntBASIC-1.79□□□□□ -2.7
AP4S1Q9Y587 AC105417.1-201ENST00000514691 285 ntBASIC-1.79□□□□□ -2.7
AP4S1Q9Y587 RNU6-966P-201ENST00000516479 104 ntBASIC-1.79□□□□□ -2.7
AP4S1Q9Y587 MIR548AE1-201ENST00000583292 70 ntBASIC-1.79□□□□□ -2.7
AP4S1Q9Y587 AL354950.2-201ENST00000617939 290 ntBASIC-1.79□□□□□ -2.7
AP4S1Q9Y587 SNORD115-34-201ENST00000362441 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-12-201ENST00000362583 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-29-201ENST00000362834 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-9-201ENST00000362912 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-21-201ENST00000362963 81 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-14-201ENST00000363090 81 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-13-201ENST00000363358 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-41-201ENST00000363608 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-11-201ENST00000363616 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-5-201ENST00000363633 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-39-201ENST00000363694 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-4-201ENST00000363810 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-16-201ENST00000363887 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-6-201ENST00000363942 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-42-201ENST00000364273 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-15-201ENST00000364809 81 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-1-201ENST00000364961 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-26-201ENST00000365067 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-10-201ENST00000365073 81 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-43-201ENST00000365503 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-36-201ENST00000365629 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD24-201ENST00000383884 75 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 RNU7-138P-201ENST00000459479 64 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 PIGPP4-201ENST00000584447 307 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 AP000942.4-201ENST00000604811 241 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 SNORD115-40-201ENST00000606510 82 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 AC004223.4-201ENST00000612426 332 ntBASIC-1.8□□□□□ -2.7
AP4S1Q9Y587 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 RNU4-75P-201ENST00000364621 146 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 RNU1-141P-201ENST00000364623 158 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 RNU6-597P-201ENST00000365620 102 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 RNU7-167P-201ENST00000459160 62 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 MTCO1P29-201ENST00000496868 288 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 MIR5704-201ENST00000584029 77 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 AC080013.3-201ENST00000606839 578 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 AC145423.2-201ENST00000610631 239 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 AL121757.2-201ENST00000611223 313 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 AL391262.2-201ENST00000622466 494 ntBASIC-1.81□□□□□ -2.7
AP4S1Q9Y587 SNORD50.1-201ENST00000362987 71 ntBASIC-1.82□□□□□ -2.7
AP4S1Q9Y587 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.82□□□□□ -2.7
AP4S1Q9Y587 RNU6-169P-201ENST00000365336 107 ntBASIC-1.82□□□□□ -2.7
AP4S1Q9Y587 RNU6-30P-201ENST00000384561 107 ntBASIC-1.82□□□□□ -2.7
AP4S1Q9Y587 RNA5SP237-201ENST00000410414 113 ntBASIC-1.82□□□□□ -2.7
AP4S1Q9Y587 RNU4-55P-201ENST00000410731 137 ntBASIC-1.82□□□□□ -2.7
AP4S1Q9Y587 U8.19-201ENST00000459095 133 ntBASIC-1.82□□□□□ -2.7
AP4S1Q9Y587 U8.22-201ENST00000459141 133 ntBASIC-1.82□□□□□ -2.7
AP4S1Q9Y587 RNU6-531P-201ENST00000516694 104 ntBASIC-1.82□□□□□ -2.7
AP4S1Q9Y587 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.82□□□□□ -2.7
AP4S1Q9Y587 AC093023.1-201ENST00000547375 507 ntBASIC-1.82□□□□□ -2.7
AP4S1Q9Y587 AL158050.2-201ENST00000605336 568 ntBASIC-1.82□□□□□ -2.7
AP4S1Q9Y587 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 RNU6-541P-201ENST00000384709 110 ntBASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 SNORD72-201ENST00000390994 80 ntBASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 RPL30P15-201ENST00000457129 321 ntBASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 AC104576.1-201ENST00000524225 88 ntBASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 AC040926.1-201ENST00000530195 238 ntBASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 AC141846.1-201ENST00000568348 142 ntBASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 MIR3941-201ENST00000582572 103 ntBASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 AC008507.4-201ENST00000585464 127 ntBASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 AC027807.2-201ENST00000616099 408 ntBASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 AC104010.1-201ENST00000616889 150 ntBASIC-1.83□□□□□ -2.7
AP4S1Q9Y587 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.84□□□□□ -2.7
AP4S1Q9Y587 RNU6-767P-201ENST00000384132 107 ntBASIC-1.84□□□□□ -2.7
AP4S1Q9Y587 RNU6-154P-201ENST00000384306 106 ntBASIC-1.84□□□□□ -2.7
AP4S1Q9Y587 SNORA72-201ENST00000384339 132 ntBASIC-1.84□□□□□ -2.7
AP4S1Q9Y587 MIR521-1-201ENST00000384902 87 ntBASIC-1.84□□□□□ -2.7
AP4S1Q9Y587 AL603910.2-201ENST00000407268 136 ntBASIC-1.84□□□□□ -2.7
AP4S1Q9Y587 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.84□□□□□ -2.7
AP4S1Q9Y587 AC112204.1-201ENST00000502591 103 ntBASIC-1.84□□□□□ -2.7
AP4S1Q9Y587 snoU83B.1-201ENST00000517136 88 ntBASIC-1.84□□□□□ -2.7
AP4S1Q9Y587 AC011603.4-201ENST00000611325 277 ntBASIC-1.84□□□□□ -2.7
AP4S1Q9Y587 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.85□□□□□ -2.71
AP4S1Q9Y587 MTND3P8-201ENST00000412909 339 ntBASIC-1.85□□□□□ -2.71
AP4S1Q9Y587 RNU7-53P-201ENST00000516705 60 ntBASIC-1.85□□□□□ -2.71
AP4S1Q9Y587 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.85□□□□□ -2.71
AP4S1Q9Y587 CPDP1-201ENST00000579660 283 ntBASIC-1.85□□□□□ -2.71
AP4S1Q9Y587 YWHAEP2-201ENST00000580066 112 ntBASIC-1.85□□□□□ -2.71
AP4S1Q9Y587 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.85□□□□□ -2.71
AP4S1Q9Y587 MIR8068-201ENST00000618032 68 ntBASIC-1.85□□□□□ -2.71
AP4S1Q9Y587 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.86□□□□□ -2.71
AP4S1Q9Y587 SNORD115-35-201ENST00000365122 82 ntBASIC-1.86□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms