Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 AC005357.1-201ENST00000588399 301 ntBASIC1.43□□□□□ -2.18
KDM3AQ9Y4C1 Y_RNA.14-201ENST00000362415 103 ntBASIC1.42□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-1209P-201ENST00000363655 107 ntBASIC1.42□□□□□ -2.18
KDM3AQ9Y4C1 Y_RNA.336-201ENST00000365307 109 ntBASIC1.42□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-1203P-201ENST00000410703 110 ntBASIC1.42□□□□□ -2.18
KDM3AQ9Y4C1 BTF3P11-201ENST00000426582 477 ntBASIC1.42□□□□□ -2.18
KDM3AQ9Y4C1 RPS29P23-201ENST00000458635 123 ntBASIC1.42□□□□□ -2.18
KDM3AQ9Y4C1 MTATP8P1-201ENST00000467115 207 ntBASIC1.42□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-917P-201ENST00000516294 104 ntBASIC1.42□□□□□ -2.18
KDM3AQ9Y4C1 AC013791.1-201ENST00000616619 62 ntBASIC1.42□□□□□ -2.18
KDM3AQ9Y4C1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
KDM3AQ9Y4C1 Y_RNA.16-201ENST00000362421 102 ntBASIC1.41□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-1272P-201ENST00000362776 107 ntBASIC1.41□□□□□ -2.18
KDM3AQ9Y4C1 Y_RNA.459-201ENST00000384251 102 ntBASIC1.41□□□□□ -2.18
KDM3AQ9Y4C1 MIR136-201ENST00000385207 82 ntBASIC1.41□□□□□ -2.18
KDM3AQ9Y4C1 MIR1298-201ENST00000408783 112 ntBASIC1.41□□□□□ -2.18
KDM3AQ9Y4C1 RPS29P29-201ENST00000456396 171 ntBASIC1.41□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-947P-201ENST00000516264 106 ntBASIC1.41□□□□□ -2.18
KDM3AQ9Y4C1 RNA5SP102-201ENST00000516865 106 ntBASIC1.41□□□□□ -2.18
KDM3AQ9Y4C1 DEFB108E-201ENST00000524692 240 ntBASIC1.41□□□□□ -2.18
KDM3AQ9Y4C1 RPL23AP91-201ENST00000569211 455 ntBASIC1.41□□□□□ -2.18
KDM3AQ9Y4C1 MIR367-201ENST00000362299 68 ntBASIC1.4□□□□□ -2.18
KDM3AQ9Y4C1 Y_RNA.293-201ENST00000364908 93 ntBASIC1.4□□□□□ -2.18
KDM3AQ9Y4C1 SNORD50B-201ENST00000364995 70 ntBASIC1.4□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-442P-201ENST00000383968 104 ntBASIC1.4□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-662P-201ENST00000384253 104 ntBASIC1.4□□□□□ -2.18
KDM3AQ9Y4C1 Y_RNA.466-201ENST00000384294 113 ntBASIC1.4□□□□□ -2.18
KDM3AQ9Y4C1 SNORD38C-201ENST00000384381 69 ntBASIC1.4□□□□□ -2.18
KDM3AQ9Y4C1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.4□□□□□ -2.18
KDM3AQ9Y4C1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.4□□□□□ -2.18
KDM3AQ9Y4C1 AC008269.2-201ENST00000561915 1105 ntBASIC1.4□□□□□ -2.18
KDM3AQ9Y4C1 MIR5692C2-201ENST00000577959 77 ntBASIC1.4□□□□□ -2.18
KDM3AQ9Y4C1 SNORA63C-201ENST00000364578 129 ntBASIC1.4□□□□□ -2.19
KDM3AQ9Y4C1 RNU6-969P-201ENST00000383900 105 ntBASIC1.4□□□□□ -2.19
KDM3AQ9Y4C1 Y_RNA.574-201ENST00000384766 95 ntBASIC1.4□□□□□ -2.19
KDM3AQ9Y4C1 MIR4724-201ENST00000579485 89 ntBASIC1.4□□□□□ -2.19
KDM3AQ9Y4C1 Y_RNA.149-201ENST00000363558 117 ntBASIC1.39□□□□□ -2.19
KDM3AQ9Y4C1 RNU6-738P-201ENST00000384531 106 ntBASIC1.39□□□□□ -2.19
KDM3AQ9Y4C1 MIR516B2-201ENST00000385190 85 ntBASIC1.39□□□□□ -2.19
KDM3AQ9Y4C1 AC015922.2-201ENST00000435593 184 ntBASIC1.39□□□□□ -2.19
KDM3AQ9Y4C1 Y_RNA.637-201ENST00000459424 114 ntBASIC1.39□□□□□ -2.19
KDM3AQ9Y4C1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.39□□□□□ -2.19
KDM3AQ9Y4C1 MIR8062-201ENST00000621515 85 ntBASIC1.39□□□□□ -2.19
KDM3AQ9Y4C1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.39□□□□□ -2.19
KDM3AQ9Y4C1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.39□□□□□ -2.19
KDM3AQ9Y4C1 UBE2WP1-201ENST00000362030 340 ntBASIC1.38□□□□□ -2.19
KDM3AQ9Y4C1 Y_RNA.44-201ENST00000362676 108 ntBASIC1.38□□□□□ -2.19
KDM3AQ9Y4C1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.38□□□□□ -2.19
KDM3AQ9Y4C1 Y_RNA.376-201ENST00000365638 108 ntBASIC1.38□□□□□ -2.19
KDM3AQ9Y4C1 Y_RNA.461-201ENST00000384263 103 ntBASIC1.38□□□□□ -2.19
KDM3AQ9Y4C1 MIR526A1-201ENST00000384897 85 ntBASIC1.38□□□□□ -2.19
KDM3AQ9Y4C1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.38□□□□□ -2.19
KDM3AQ9Y4C1 MIR4452-201ENST00000583004 71 ntBASIC1.38□□□□□ -2.19
KDM3AQ9Y4C1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
KDM3AQ9Y4C1 Y_RNA.512-201ENST00000384518 102 ntBASIC1.37□□□□□ -2.19
KDM3AQ9Y4C1 SNORD41-201ENST00000386967 70 ntBASIC1.37□□□□□ -2.19
KDM3AQ9Y4C1 MIR1278-201ENST00000408753 81 ntBASIC1.37□□□□□ -2.19
KDM3AQ9Y4C1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.37□□□□□ -2.19
KDM3AQ9Y4C1 AL117187.1-201ENST00000555482 181 ntBASIC1.37□□□□□ -2.19
KDM3AQ9Y4C1 AC006006.1-201ENST00000603082 144 ntBASIC1.37□□□□□ -2.19
KDM3AQ9Y4C1 AC136443.5-201ENST00000603741 370 ntBASIC1.37□□□□□ -2.19
KDM3AQ9Y4C1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
KDM3AQ9Y4C1 AC091895.1-201ENST00000624494 256 ntBASIC1.37□□□□□ -2.19
KDM3AQ9Y4C1 Y_RNA.217-201ENST00000364214 105 ntBASIC1.36□□□□□ -2.19
KDM3AQ9Y4C1 Y_RNA.237-201ENST00000364439 102 ntBASIC1.36□□□□□ -2.19
KDM3AQ9Y4C1 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
KDM3AQ9Y4C1 SNORD26-201ENST00000384147 75 ntBASIC1.36□□□□□ -2.19
KDM3AQ9Y4C1 RNA5SP496-201ENST00000391240 109 ntBASIC1.36□□□□□ -2.19
KDM3AQ9Y4C1 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
KDM3AQ9Y4C1 Y_RNA.641-201ENST00000459414 105 ntBASIC1.36□□□□□ -2.19
KDM3AQ9Y4C1 SNORA31.4-201ENST00000516049 129 ntBASIC1.36□□□□□ -2.19
KDM3AQ9Y4C1 RNU6-327P-201ENST00000516270 127 ntBASIC1.36□□□□□ -2.19
KDM3AQ9Y4C1 SNORD111.1-201ENST00000516421 86 ntBASIC1.36□□□□□ -2.19
KDM3AQ9Y4C1 AL360085.1-201ENST00000604713 532 ntBASIC1.36□□□□□ -2.19
KDM3AQ9Y4C1 snoU18.1-201ENST00000629629 71 ntBASIC1.36□□□□□ -2.19
KDM3AQ9Y4C1 MIR335-201ENST00000362173 94 ntBASIC1.35□□□□□ -2.19
KDM3AQ9Y4C1 Y_RNA.275-201ENST00000364726 110 ntBASIC1.35□□□□□ -2.19
KDM3AQ9Y4C1 MIR1302-3-201ENST00000408128 138 ntBASIC1.35□□□□□ -2.19
KDM3AQ9Y4C1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.35□□□□□ -2.19
KDM3AQ9Y4C1 AC090142.3-201ENST00000519012 385 ntBASIC1.35□□□□□ -2.19
KDM3AQ9Y4C1 AC090821.2-201ENST00000523552 176 ntBASIC1.35□□□□□ -2.19
KDM3AQ9Y4C1 AC008507.4-201ENST00000585464 127 ntBASIC1.35□□□□□ -2.19
KDM3AQ9Y4C1 Y_RNA.802-201ENST00000614892 130 ntBASIC1.35□□□□□ -2.19
KDM3AQ9Y4C1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KDM3AQ9Y4C1 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.2
KDM3AQ9Y4C1 Y_RNA.162-201ENST00000363683 102 ntBASIC1.34□□□□□ -2.2
KDM3AQ9Y4C1 SNORD114-22-201ENST00000365423 72 ntBASIC1.34□□□□□ -2.2
KDM3AQ9Y4C1 RNU6-1289P-201ENST00000384431 106 ntBASIC1.34□□□□□ -2.2
KDM3AQ9Y4C1 AL078595.1-201ENST00000404458 226 ntBASIC1.34□□□□□ -2.2
KDM3AQ9Y4C1 MIR548F4-201ENST00000408515 105 ntBASIC1.34□□□□□ -2.2
KDM3AQ9Y4C1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.34□□□□□ -2.2
KDM3AQ9Y4C1 Y_RNA.679-201ENST00000516416 91 ntBASIC1.34□□□□□ -2.2
KDM3AQ9Y4C1 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.2
KDM3AQ9Y4C1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.34□□□□□ -2.2
KDM3AQ9Y4C1 AP001282.2-201ENST00000616149 309 ntBASIC1.34□□□□□ -2.2
KDM3AQ9Y4C1 Y_RNA.47-201ENST00000362697 108 ntBASIC1.33□□□□□ -2.2
KDM3AQ9Y4C1 Y_RNA.540-201ENST00000384638 111 ntBASIC1.33□□□□□ -2.2
KDM3AQ9Y4C1 MIR222-201ENST00000384992 110 ntBASIC1.33□□□□□ -2.2
KDM3AQ9Y4C1 RNU6-383P-201ENST00000410864 94 ntBASIC1.33□□□□□ -2.2
KDM3AQ9Y4C1 SNORD11-201ENST00000459124 84 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms