Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC104985.2-201ENST00000620598 500 ntBASIC0.84□□□□□ -2.27
NPC1L1Q9UHC9 AL589743.1-201ENST00000551932 2712 ntBASIC0.84□□□□□ -2.27
NPC1L1Q9UHC9 MIR103A2-201ENST00000362154 78 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 RNU6-969P-201ENST00000383900 105 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 RNU6-442P-201ENST00000383968 104 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 Y_RNA.431-201ENST00000384086 102 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 SNORA75.2-201ENST00000391138 150 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 SNORA75.3-201ENST00000391231 150 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 POLR2KP2-201ENST00000438155 177 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 AC040926.1-201ENST00000530195 238 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 MIR548AY-201ENST00000617669 107 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 RNA5SP347-201ENST00000362445 119 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 Y_RNA.370-201ENST00000365589 108 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 Y_RNA.424-201ENST00000384063 103 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 AC022028.1-201ENST00000412054 408 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 MTND1P14-201ENST00000427400 950 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 SNORD123-201ENST00000459473 70 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 RNU11-2P-201ENST00000516898 142 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 AC136628.3-201ENST00000521868 290 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 AC093027.1-201ENST00000546698 429 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 SNORD58B-201ENST00000607313 66 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 SEPT14P17-201ENST00000617978 177 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 AC112487.2-201ENST00000637950 304 ntBASIC0.83□□□□□ -2.28
NPC1L1Q9UHC9 SNORD81.1-201ENST00000363064 77 ntBASIC0.82□□□□□ -2.28
NPC1L1Q9UHC9 SNORA63.7-201ENST00000365579 123 ntBASIC0.82□□□□□ -2.28
NPC1L1Q9UHC9 AL590004.1-201ENST00000405321 300 ntBASIC0.82□□□□□ -2.28
NPC1L1Q9UHC9 MIR1302-11-201ENST00000408051 138 ntBASIC0.82□□□□□ -2.28
NPC1L1Q9UHC9 MIR1302-9-201ENST00000408365 138 ntBASIC0.82□□□□□ -2.28
NPC1L1Q9UHC9 MIR1302-10-201ENST00000408734 138 ntBASIC0.82□□□□□ -2.28
NPC1L1Q9UHC9 RNU2-64P-201ENST00000411315 191 ntBASIC0.82□□□□□ -2.28
NPC1L1Q9UHC9 AL358176.2-201ENST00000425769 204 ntBASIC0.82□□□□□ -2.28
NPC1L1Q9UHC9 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
NPC1L1Q9UHC9 RNU6-507P-201ENST00000516045 100 ntBASIC0.82□□□□□ -2.28
NPC1L1Q9UHC9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
NPC1L1Q9UHC9 AC104695.3-201ENST00000604052 296 ntBASIC0.82□□□□□ -2.28
NPC1L1Q9UHC9 MIR1302-2-201ENST00000607096 138 ntBASIC0.82□□□□□ -2.28
NPC1L1Q9UHC9 AL109933.3-201ENST00000619095 188 ntBASIC0.82□□□□□ -2.28
NPC1L1Q9UHC9 Y_RNA.58-201ENST00000362807 102 ntBASIC0.81□□□□□ -2.28
NPC1L1Q9UHC9 RNU4-73P-201ENST00000363164 141 ntBASIC0.81□□□□□ -2.28
NPC1L1Q9UHC9 Y_RNA.143-201ENST00000363520 106 ntBASIC0.81□□□□□ -2.28
NPC1L1Q9UHC9 Y_RNA.154-201ENST00000363624 102 ntBASIC0.81□□□□□ -2.28
NPC1L1Q9UHC9 Y_RNA.251-201ENST00000364551 99 ntBASIC0.81□□□□□ -2.28
NPC1L1Q9UHC9 RNY3P1-201ENST00000365085 102 ntBASIC0.81□□□□□ -2.28
NPC1L1Q9UHC9 Y_RNA.330-201ENST00000365230 109 ntBASIC0.81□□□□□ -2.28
NPC1L1Q9UHC9 Y_RNA.383-201ENST00000383855 97 ntBASIC0.81□□□□□ -2.28
NPC1L1Q9UHC9 RNU6-937P-201ENST00000384325 106 ntBASIC0.81□□□□□ -2.28
NPC1L1Q9UHC9 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
NPC1L1Q9UHC9 Y_RNA.579-201ENST00000390939 94 ntBASIC0.81□□□□□ -2.28
NPC1L1Q9UHC9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.81□□□□□ -2.28
NPC1L1Q9UHC9 MIR330-201ENST00000362196 94 ntBASIC0.8□□□□□ -2.28
NPC1L1Q9UHC9 U8.7-201ENST00000364940 136 ntBASIC0.8□□□□□ -2.28
NPC1L1Q9UHC9 RNU4-30P-201ENST00000410245 143 ntBASIC0.8□□□□□ -2.28
NPC1L1Q9UHC9 RNU6-437P-201ENST00000459408 95 ntBASIC0.8□□□□□ -2.28
NPC1L1Q9UHC9 AP003716.2-201ENST00000528260 108 ntBASIC0.8□□□□□ -2.28
NPC1L1Q9UHC9 AC004817.2-201ENST00000561794 651 ntBASIC0.8□□□□□ -2.28
NPC1L1Q9UHC9 MIR4795-201ENST00000584182 89 ntBASIC0.8□□□□□ -2.28
NPC1L1Q9UHC9 AL133255.1-201ENST00000606374 441 ntBASIC0.8□□□□□ -2.28
NPC1L1Q9UHC9 MIR8087-201ENST00000612745 78 ntBASIC0.8□□□□□ -2.28
NPC1L1Q9UHC9 Y_RNA.804-201ENST00000615262 101 ntBASIC0.8□□□□□ -2.28
NPC1L1Q9UHC9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.8□□□□□ -2.28
NPC1L1Q9UHC9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
NPC1L1Q9UHC9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
NPC1L1Q9UHC9 RNU6-674P-201ENST00000363831 107 ntBASIC0.79□□□□□ -2.28
NPC1L1Q9UHC9 RPS3AP1-201ENST00000413190 320 ntBASIC0.79□□□□□ -2.28
NPC1L1Q9UHC9 AC023449.1-201ENST00000454464 154 ntBASIC0.79□□□□□ -2.28
NPC1L1Q9UHC9 snoU13.25-201ENST00000458945 104 ntBASIC0.79□□□□□ -2.28
NPC1L1Q9UHC9 RNU7-41P-201ENST00000515917 61 ntBASIC0.79□□□□□ -2.28
NPC1L1Q9UHC9 RNU6-496P-201ENST00000516145 99 ntBASIC0.79□□□□□ -2.28
NPC1L1Q9UHC9 RNU6-830P-201ENST00000516353 107 ntBASIC0.79□□□□□ -2.28
NPC1L1Q9UHC9 AC243829.3-201ENST00000622177 108 ntBASIC0.79□□□□□ -2.28
NPC1L1Q9UHC9 RNU6-1209P-201ENST00000363655 107 ntBASIC0.78□□□□□ -2.28
NPC1L1Q9UHC9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.78□□□□□ -2.28
NPC1L1Q9UHC9 SNORA36B-201ENST00000410438 131 ntBASIC0.78□□□□□ -2.28
NPC1L1Q9UHC9 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
NPC1L1Q9UHC9 AC098934.3-201ENST00000430450 190 ntBASIC0.78□□□□□ -2.28
NPC1L1Q9UHC9 AC092628.1-201ENST00000436250 252 ntBASIC0.78□□□□□ -2.28
NPC1L1Q9UHC9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.78□□□□□ -2.28
NPC1L1Q9UHC9 RNA5SP255-201ENST00000516370 107 ntBASIC0.78□□□□□ -2.28
NPC1L1Q9UHC9 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
NPC1L1Q9UHC9 AC090971.5-201ENST00000621102 293 ntBASIC0.78□□□□□ -2.28
NPC1L1Q9UHC9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
NPC1L1Q9UHC9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
NPC1L1Q9UHC9 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
NPC1L1Q9UHC9 Y_RNA.80-201ENST00000362996 102 ntBASIC0.77□□□□□ -2.29
NPC1L1Q9UHC9 SNORA72.4-201ENST00000384174 132 ntBASIC0.77□□□□□ -2.29
NPC1L1Q9UHC9 RNY3P14-201ENST00000384309 102 ntBASIC0.77□□□□□ -2.29
NPC1L1Q9UHC9 Y_RNA.485-201ENST00000384395 102 ntBASIC0.77□□□□□ -2.29
NPC1L1Q9UHC9 AC067940.1-201ENST00000458411 300 ntBASIC0.77□□□□□ -2.29
NPC1L1Q9UHC9 RNU6-197P-201ENST00000516680 100 ntBASIC0.77□□□□□ -2.29
NPC1L1Q9UHC9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.77□□□□□ -2.29
NPC1L1Q9UHC9 MIR3145-201ENST00000580727 82 ntBASIC0.77□□□□□ -2.29
NPC1L1Q9UHC9 AC025627.3-201ENST00000582078 182 ntBASIC0.77□□□□□ -2.29
NPC1L1Q9UHC9 AL136317.1-201ENST00000612653 226 ntBASIC0.77□□□□□ -2.29
NPC1L1Q9UHC9 Pinc.1-201ENST00000616452 154 ntBASIC0.77□□□□□ -2.29
NPC1L1Q9UHC9 MIR4251-201ENST00000635819 61 ntBASIC0.77□□□□□ -2.29
NPC1L1Q9UHC9 SNORA25.3-201ENST00000363205 127 ntBASIC0.76□□□□□ -2.29
NPC1L1Q9UHC9 Y_RNA.178-201ENST00000363832 102 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms