Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MTND4P17-201ENST00000470444 350 ntBASIC0.12□□□□□ -2.39
CLN6Q9NWW5 AC091951.2-201ENST00000500762 203 ntBASIC0.12□□□□□ -2.39
CLN6Q9NWW5 DEFB117-201ENST00000602356 141 ntBASIC0.12□□□□□ -2.39
CLN6Q9NWW5 AL078603.1-201ENST00000603824 313 ntBASIC0.12□□□□□ -2.39
CLN6Q9NWW5 AL080274.1-201ENST00000605565 220 ntBASIC0.12□□□□□ -2.39
CLN6Q9NWW5 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.12□□□□□ -2.39
CLN6Q9NWW5 uc_338.16-201ENST00000621804 95 ntBASIC0.12□□□□□ -2.39
CLN6Q9NWW5 TPTEP1-208ENST00000636884 213 ntBASIC0.12□□□□□ -2.39
CLN6Q9NWW5 RNA5SP432-201ENST00000362480 116 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 Y_RNA.27-201ENST00000362540 103 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 RNA5SP517-201ENST00000364724 117 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 Y_RNA.331-201ENST00000365267 102 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 RNU6-890P-201ENST00000384121 107 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 MIR499A-201ENST00000384903 122 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 MIR938-201ENST00000401216 83 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 RNU4-14P-201ENST00000410858 122 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 RNU7-56P-201ENST00000458744 62 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 RNU2-13P-201ENST00000515909 113 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 RPL23AP91-201ENST00000569211 455 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 MIR4431-201ENST00000579990 94 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 MIR5690-201ENST00000583739 73 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 AC020891.4-201ENST00000605745 93 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 AC006441.5-201ENST00000612680 209 ntBASIC0.11□□□□□ -2.39
CLN6Q9NWW5 SNORA63C-201ENST00000364578 129 ntBASIC0.1□□□□□ -2.39
CLN6Q9NWW5 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.1□□□□□ -2.39
CLN6Q9NWW5 AF228730.4-201ENST00000421457 183 ntBASIC0.1□□□□□ -2.39
CLN6Q9NWW5 snoU13.16-201ENST00000459350 104 ntBASIC0.1□□□□□ -2.39
CLN6Q9NWW5 RNU6-437P-201ENST00000459408 95 ntBASIC0.1□□□□□ -2.39
CLN6Q9NWW5 AC107297.1-201ENST00000459991 176 ntBASIC0.1□□□□□ -2.39
CLN6Q9NWW5 SNORA18.4-201ENST00000516440 124 ntBASIC0.1□□□□□ -2.39
CLN6Q9NWW5 RNU6-911P-201ENST00000516523 104 ntBASIC0.1□□□□□ -2.39
CLN6Q9NWW5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.1□□□□□ -2.39
CLN6Q9NWW5 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.1□□□□□ -2.39
CLN6Q9NWW5 RNU6-1188P-201ENST00000363795 107 ntBASIC0.09□□□□□ -2.4
CLN6Q9NWW5 RNU6-708P-201ENST00000384217 107 ntBASIC0.09□□□□□ -2.4
CLN6Q9NWW5 AL603910.2-201ENST00000407268 136 ntBASIC0.09□□□□□ -2.4
CLN6Q9NWW5 Y_RNA.599-201ENST00000410489 109 ntBASIC0.09□□□□□ -2.4
CLN6Q9NWW5 AL589823.1-201ENST00000429577 183 ntBASIC0.09□□□□□ -2.4
CLN6Q9NWW5 AC069439.1-201ENST00000494739 167 ntBASIC0.09□□□□□ -2.4
CLN6Q9NWW5 RNA5SP94-201ENST00000516917 108 ntBASIC0.09□□□□□ -2.4
CLN6Q9NWW5 SNORA25.18-201ENST00000607153 114 ntBASIC0.09□□□□□ -2.4
CLN6Q9NWW5 Y_RNA.224-201ENST00000364308 111 ntBASIC0.08□□□□□ -2.4
CLN6Q9NWW5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
CLN6Q9NWW5 RNU6-364P-201ENST00000384387 107 ntBASIC0.08□□□□□ -2.4
CLN6Q9NWW5 SNORD100-201ENST00000408573 76 ntBASIC0.08□□□□□ -2.4
CLN6Q9NWW5 MIR1278-201ENST00000408753 81 ntBASIC0.08□□□□□ -2.4
CLN6Q9NWW5 AC090844.1-201ENST00000422019 156 ntBASIC0.08□□□□□ -2.4
CLN6Q9NWW5 BTF3P11-201ENST00000426582 477 ntBASIC0.08□□□□□ -2.4
CLN6Q9NWW5 AC073261.1-201ENST00000429409 121 ntBASIC0.08□□□□□ -2.4
CLN6Q9NWW5 RNU6-358P-201ENST00000516564 75 ntBASIC0.08□□□□□ -2.4
CLN6Q9NWW5 Y_RNA.691-201ENST00000516611 103 ntBASIC0.08□□□□□ -2.4
CLN6Q9NWW5 AL355297.3-201ENST00000604082 446 ntBASIC0.08□□□□□ -2.4
CLN6Q9NWW5 AC134878.1-201ENST00000619901 243 ntBASIC0.08□□□□□ -2.4
CLN6Q9NWW5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
CLN6Q9NWW5 SNORA36B-201ENST00000410438 131 ntBASIC0.07□□□□□ -2.4
CLN6Q9NWW5 AC236972.2-201ENST00000434979 310 ntBASIC0.07□□□□□ -2.4
CLN6Q9NWW5 RNU6-1132P-201ENST00000459214 107 ntBASIC0.07□□□□□ -2.4
CLN6Q9NWW5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.07□□□□□ -2.4
CLN6Q9NWW5 MIR4423-201ENST00000580922 80 ntBASIC0.07□□□□□ -2.4
CLN6Q9NWW5 Y_RNA.6-201ENST00000362350 114 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 Y_RNA.164-201ENST00000363709 102 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU6-674P-201ENST00000363831 107 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU6-1319P-201ENST00000390855 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU6-747P-201ENST00000390928 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU6-241P-201ENST00000391148 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU6-447P-201ENST00000410293 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU6-1118P-201ENST00000410382 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU6-1076P-201ENST00000410397 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU6-355P-201ENST00000410427 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU6-791P-201ENST00000410467 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU6-705P-201ENST00000410601 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU6-1100P-201ENST00000410691 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU6-860P-201ENST00000410860 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU6-1217P-201ENST00000411276 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU6-785P-201ENST00000411324 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 AC096644.2-201ENST00000429278 159 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 AC099799.1-201ENST00000439809 192 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 MTATP6P26-201ENST00000445926 662 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 RNU7-67P-201ENST00000459003 62 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 AC091959.1-201ENST00000495857 238 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 AC090897.1-201ENST00000580909 226 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 U6.90-201ENST00000614007 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 AC133104.2-201ENST00000615272 193 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 U6.70-201ENST00000620287 104 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 AC078938.1-201ENST00000620993 318 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 AC010332.2-201ENST00000613083 1904 ntBASIC0.06□□□□□ -2.4
CLN6Q9NWW5 MIR1257-201ENST00000408490 117 ntBASIC0.05□□□□□ -2.4
CLN6Q9NWW5 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.05□□□□□ -2.4
CLN6Q9NWW5 MIR18B-201ENST00000454574 71 ntBASIC0.05□□□□□ -2.4
CLN6Q9NWW5 SNORD11-201ENST00000459124 84 ntBASIC0.05□□□□□ -2.4
CLN6Q9NWW5 RNU7-141P-201ENST00000459304 62 ntBASIC0.05□□□□□ -2.4
CLN6Q9NWW5 RNA5SP220-201ENST00000516298 104 ntBASIC0.05□□□□□ -2.4
CLN6Q9NWW5 RNU7-25P-201ENST00000516544 62 ntBASIC0.05□□□□□ -2.4
CLN6Q9NWW5 RNU7-110P-201ENST00000516891 62 ntBASIC0.05□□□□□ -2.4
CLN6Q9NWW5 MIR3145-201ENST00000580727 82 ntBASIC0.05□□□□□ -2.4
CLN6Q9NWW5 AC011373.1-201ENST00000607270 237 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 222.5 ms