Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 U6.92-201ENST00000636464 89 ntBASIC0.19□□□□□ -2.38
RBFOX1Q9NWB1 SNORA63C-201ENST00000364578 129 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 U8.7-201ENST00000364940 136 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 Y_RNA.318-201ENST00000365131 97 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 RNU6-890P-201ENST00000384121 107 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 AF228730.4-201ENST00000421457 183 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 AL589823.1-201ENST00000429577 183 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 RNU7-169P-201ENST00000459456 61 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 RNU7-181P-201ENST00000517234 74 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 MIR4804-201ENST00000581683 73 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 AL080274.1-201ENST00000605565 220 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 AL162730.1-201ENST00000605734 292 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 AC133104.2-201ENST00000615272 193 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 AC092634.7-201ENST00000621022 103 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 AC073869.6-201ENST00000640656 341 ntBASIC0.18□□□□□ -2.38
RBFOX1Q9NWB1 RNU6-490P-201ENST00000362985 107 ntBASIC0.17□□□□□ -2.38
RBFOX1Q9NWB1 Y_RNA.226-201ENST00000364337 114 ntBASIC0.17□□□□□ -2.38
RBFOX1Q9NWB1 Y_RNA.279-201ENST00000364763 95 ntBASIC0.17□□□□□ -2.38
RBFOX1Q9NWB1 RNY1P14-201ENST00000384426 108 ntBASIC0.17□□□□□ -2.38
RBFOX1Q9NWB1 AL590004.1-201ENST00000405321 300 ntBASIC0.17□□□□□ -2.38
RBFOX1Q9NWB1 MIR1287-201ENST00000408492 90 ntBASIC0.17□□□□□ -2.38
RBFOX1Q9NWB1 FGF7P6-202ENST00000451282 293 ntBASIC0.17□□□□□ -2.38
RBFOX1Q9NWB1 snoU13.16-201ENST00000459350 104 ntBASIC0.17□□□□□ -2.38
RBFOX1Q9NWB1 RNU6-437P-201ENST00000459408 95 ntBASIC0.17□□□□□ -2.38
RBFOX1Q9NWB1 MIR4771-2-201ENST00000577758 74 ntBASIC0.17□□□□□ -2.38
RBFOX1Q9NWB1 MIR4771-1-201ENST00000582617 74 ntBASIC0.17□□□□□ -2.38
RBFOX1Q9NWB1 VN1R91P-201ENST00000594377 169 ntBASIC0.17□□□□□ -2.38
RBFOX1Q9NWB1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 Y_RNA.314-201ENST00000365114 102 ntBASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 Y_RNA.331-201ENST00000365267 102 ntBASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 Y_RNA.354-201ENST00000365448 111 ntBASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 SNORA24-201ENST00000384096 131 ntBASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 RNU6-205P-201ENST00000390858 107 ntBASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 SNORD83.1-201ENST00000411362 77 ntBASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 RNU7-56P-201ENST00000458744 62 ntBASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 snoU13.21-201ENST00000459368 105 ntBASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 MIR4676-201ENST00000583078 72 ntBASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 DEFB117-201ENST00000602356 141 ntBASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 AC022709.1-201ENST00000615967 87 ntBASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.16□□□□□ -2.38
RBFOX1Q9NWB1 SNORD81.1-201ENST00000363064 77 ntBASIC0.15□□□□□ -2.39
RBFOX1Q9NWB1 RNY3P11-201ENST00000364153 102 ntBASIC0.15□□□□□ -2.39
RBFOX1Q9NWB1 Y_RNA.238-201ENST00000364441 102 ntBASIC0.15□□□□□ -2.39
RBFOX1Q9NWB1 RNU6-125P-201ENST00000384505 107 ntBASIC0.15□□□□□ -2.39
RBFOX1Q9NWB1 AL603910.2-201ENST00000407268 136 ntBASIC0.15□□□□□ -2.39
RBFOX1Q9NWB1 Y_RNA.653-201ENST00000459091 95 ntBASIC0.15□□□□□ -2.39
RBFOX1Q9NWB1 SNORD11-201ENST00000459124 84 ntBASIC0.15□□□□□ -2.39
RBFOX1Q9NWB1 AC107297.1-201ENST00000459991 176 ntBASIC0.15□□□□□ -2.39
RBFOX1Q9NWB1 MTND4P17-201ENST00000470444 350 ntBASIC0.15□□□□□ -2.39
RBFOX1Q9NWB1 AL355297.3-201ENST00000604082 446 ntBASIC0.15□□□□□ -2.39
RBFOX1Q9NWB1 LARP7P1-201ENST00000605576 316 ntBASIC0.15□□□□□ -2.39
RBFOX1Q9NWB1 RNU6-349P-201ENST00000362402 107 ntBASIC0.14□□□□□ -2.39
RBFOX1Q9NWB1 MIR518A1-201ENST00000385068 85 ntBASIC0.14□□□□□ -2.39
RBFOX1Q9NWB1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
RBFOX1Q9NWB1 SNORD72-201ENST00000390994 80 ntBASIC0.14□□□□□ -2.39
RBFOX1Q9NWB1 SNORD100-201ENST00000408573 76 ntBASIC0.14□□□□□ -2.39
RBFOX1Q9NWB1 SNORA40.8-201ENST00000411034 126 ntBASIC0.14□□□□□ -2.39
RBFOX1Q9NWB1 SNORD71-201ENST00000411292 86 ntBASIC0.14□□□□□ -2.39
RBFOX1Q9NWB1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.14□□□□□ -2.39
RBFOX1Q9NWB1 RPL23AP91-201ENST00000569211 455 ntBASIC0.14□□□□□ -2.39
RBFOX1Q9NWB1 SNORA4-201ENST00000584302 138 ntBASIC0.14□□□□□ -2.39
RBFOX1Q9NWB1 AC022306.2-201ENST00000617563 647 ntBASIC0.14□□□□□ -2.39
RBFOX1Q9NWB1 uc_338.16-201ENST00000621804 95 ntBASIC0.14□□□□□ -2.39
RBFOX1Q9NWB1 AL589743.1-201ENST00000551932 2712 ntBASIC0.14□□□□□ -2.39
RBFOX1Q9NWB1 SNORD44.1-201ENST00000363202 61 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 RNU4-50P-201ENST00000364361 141 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 RNU6-42P-201ENST00000384165 107 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 MIR938-201ENST00000401216 83 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 SNORA36B-201ENST00000410438 131 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 FCF1P9-201ENST00000412546 282 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 PDCL2P1-201ENST00000419302 352 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 MIR18B-201ENST00000454574 71 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 RNU7-62P-201ENST00000458856 62 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 RNU6-863P-201ENST00000515989 104 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 AC022523.2-201ENST00000561045 150 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 Y_RNA.772-201ENST00000606692 102 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 AC011373.1-201ENST00000607270 237 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 AC084782.3-201ENST00000612282 578 ntBASIC0.13□□□□□ -2.39
RBFOX1Q9NWB1 Y_RNA.116-201ENST00000363292 103 ntBASIC0.12□□□□□ -2.39
RBFOX1Q9NWB1 RNU6-708P-201ENST00000384217 107 ntBASIC0.12□□□□□ -2.39
RBFOX1Q9NWB1 SNORD63-201ENST00000384262 68 ntBASIC0.12□□□□□ -2.39
RBFOX1Q9NWB1 MIR559-201ENST00000385188 96 ntBASIC0.12□□□□□ -2.39
RBFOX1Q9NWB1 RNU6-1248P-201ENST00000391096 64 ntBASIC0.12□□□□□ -2.39
RBFOX1Q9NWB1 SNRPGP12-201ENST00000449481 213 ntBASIC0.12□□□□□ -2.39
RBFOX1Q9NWB1 SNORA25.12-201ENST00000516202 82 ntBASIC0.12□□□□□ -2.39
RBFOX1Q9NWB1 SNORA18.4-201ENST00000516440 124 ntBASIC0.12□□□□□ -2.39
RBFOX1Q9NWB1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.12□□□□□ -2.39
RBFOX1Q9NWB1 AC006600.1-201ENST00000572529 153 ntBASIC0.12□□□□□ -2.39
RBFOX1Q9NWB1 MIR4431-201ENST00000579990 94 ntBASIC0.12□□□□□ -2.39
RBFOX1Q9NWB1 AC113139.1-201ENST00000605049 239 ntBASIC0.12□□□□□ -2.39
RBFOX1Q9NWB1 AC020891.4-201ENST00000605745 93 ntBASIC0.12□□□□□ -2.39
RBFOX1Q9NWB1 SNORD115-34-201ENST00000362441 82 ntBASIC0.11□□□□□ -2.39
RBFOX1Q9NWB1 SNORD115-12-201ENST00000362583 82 ntBASIC0.11□□□□□ -2.39
RBFOX1Q9NWB1 SNORD115-29-201ENST00000362834 82 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms