Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 RNA5SP233-201ENST00000459153 113 ntBASIC2.07□□□□□ -2.08
TDP1Q9NUW8 AC099513.1-201ENST00000490423 301 ntBASIC2.07□□□□□ -2.08
TDP1Q9NUW8 RNU6-1212P-201ENST00000517023 104 ntBASIC2.07□□□□□ -2.08
TDP1Q9NUW8 RNU6-1116P-201ENST00000517269 99 ntBASIC2.07□□□□□ -2.08
TDP1Q9NUW8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.07□□□□□ -2.08
TDP1Q9NUW8 MIR4287-201ENST00000579398 78 ntBASIC2.07□□□□□ -2.08
TDP1Q9NUW8 AC021506.2-201ENST00000612354 169 ntBASIC2.07□□□□□ -2.08
TDP1Q9NUW8 MIR6845-201ENST00000613182 61 ntBASIC2.07□□□□□ -2.08
TDP1Q9NUW8 AL773524.1-201ENST00000614065 229 ntBASIC2.07□□□□□ -2.08
TDP1Q9NUW8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
TDP1Q9NUW8 RNU6-1084P-201ENST00000362498 107 ntBASIC2.06□□□□□ -2.08
TDP1Q9NUW8 Y_RNA.272-201ENST00000364696 102 ntBASIC2.06□□□□□ -2.08
TDP1Q9NUW8 RNU6-804P-201ENST00000384286 107 ntBASIC2.06□□□□□ -2.08
TDP1Q9NUW8 RNU6-424P-201ENST00000384367 105 ntBASIC2.06□□□□□ -2.08
TDP1Q9NUW8 Y_RNA.486-201ENST00000384398 107 ntBASIC2.06□□□□□ -2.08
TDP1Q9NUW8 RNU6-360P-201ENST00000390944 104 ntBASIC2.06□□□□□ -2.08
TDP1Q9NUW8 SNORA79-201ENST00000408376 140 ntBASIC2.06□□□□□ -2.08
TDP1Q9NUW8 AC006461.1-201ENST00000412637 326 ntBASIC2.06□□□□□ -2.08
TDP1Q9NUW8 AC107027.2-201ENST00000512197 115 ntBASIC2.06□□□□□ -2.08
TDP1Q9NUW8 SNORD45.4-201ENST00000516629 73 ntBASIC2.06□□□□□ -2.08
TDP1Q9NUW8 RNA5SP168-201ENST00000516642 112 ntBASIC2.06□□□□□ -2.08
TDP1Q9NUW8 MIR4662B-201ENST00000579498 81 ntBASIC2.06□□□□□ -2.08
TDP1Q9NUW8 AC120024.3-201ENST00000603167 156 ntBASIC2.06□□□□□ -2.08
TDP1Q9NUW8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
TDP1Q9NUW8 Y_RNA.91-201ENST00000363042 107 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 snoU2-30.1-201ENST00000365012 70 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 RNU6-239P-201ENST00000390990 99 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 SNORA40.18-201ENST00000391200 128 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 AL356379.1-201ENST00000414105 126 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 AC244636.1-201ENST00000421152 228 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 AC079804.2-201ENST00000490376 200 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 CYCTP-201ENST00000504253 315 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 RNA5SP153-201ENST00000516498 76 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 RNU6-197P-201ENST00000516680 100 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 RNU6-255P-201ENST00000516957 105 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 AL160236.1-201ENST00000556317 195 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 MIR3144-201ENST00000579460 79 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 AC021753.1-201ENST00000635724 168 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
TDP1Q9NUW8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
TDP1Q9NUW8 SNORD14E-201ENST00000364009 85 ntBASIC2.04□□□□□ -2.08
TDP1Q9NUW8 RNU6-163P-201ENST00000384396 106 ntBASIC2.04□□□□□ -2.08
TDP1Q9NUW8 MIR17-201ENST00000385012 84 ntBASIC2.04□□□□□ -2.08
TDP1Q9NUW8 RNU2-70P-201ENST00000410718 179 ntBASIC2.04□□□□□ -2.08
TDP1Q9NUW8 AL445685.2-201ENST00000422551 342 ntBASIC2.04□□□□□ -2.08
TDP1Q9NUW8 AC114811.1-201ENST00000507207 168 ntBASIC2.04□□□□□ -2.08
TDP1Q9NUW8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.04□□□□□ -2.08
TDP1Q9NUW8 RNU6-126P-201ENST00000516685 103 ntBASIC2.04□□□□□ -2.08
TDP1Q9NUW8 AC022254.1-201ENST00000567857 235 ntBASIC2.04□□□□□ -2.08
TDP1Q9NUW8 MIR5089-201ENST00000580047 84 ntBASIC2.04□□□□□ -2.08
TDP1Q9NUW8 AC097639.2-201ENST00000603159 172 ntBASIC2.04□□□□□ -2.08
TDP1Q9NUW8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
TDP1Q9NUW8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
TDP1Q9NUW8 Y_RNA.8-201ENST00000362353 102 ntBASIC2.03□□□□□ -2.08
TDP1Q9NUW8 Y_RNA.242-201ENST00000364473 110 ntBASIC2.03□□□□□ -2.08
TDP1Q9NUW8 Y_RNA.634-201ENST00000364811 113 ntBASIC2.03□□□□□ -2.08
TDP1Q9NUW8 MIR802-201ENST00000390235 94 ntBASIC2.03□□□□□ -2.08
TDP1Q9NUW8 RPL30P13-201ENST00000418873 348 ntBASIC2.03□□□□□ -2.08
TDP1Q9NUW8 CYCSP49-201ENST00000420810 319 ntBASIC2.03□□□□□ -2.08
TDP1Q9NUW8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.03□□□□□ -2.08
TDP1Q9NUW8 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
TDP1Q9NUW8 AC027279.3-201ENST00000625055 122 ntBASIC2.03□□□□□ -2.08
TDP1Q9NUW8 RNU6-1130P-201ENST00000365434 107 ntBASIC2.02□□□□□ -2.09
TDP1Q9NUW8 Y_RNA.398-201ENST00000383952 99 ntBASIC2.02□□□□□ -2.09
TDP1Q9NUW8 Y_RNA.580-201ENST00000391004 95 ntBASIC2.02□□□□□ -2.09
TDP1Q9NUW8 SNORA26-201ENST00000391286 122 ntBASIC2.02□□□□□ -2.09
TDP1Q9NUW8 PGBD4P5-201ENST00000445958 426 ntBASIC2.02□□□□□ -2.09
TDP1Q9NUW8 RNU7-121P-201ENST00000516604 62 ntBASIC2.02□□□□□ -2.09
TDP1Q9NUW8 AL513423.1-201ENST00000621695 132 ntBASIC2.02□□□□□ -2.09
TDP1Q9NUW8 Y_RNA.170-201ENST00000363746 110 ntBASIC2.01□□□□□ -2.09
TDP1Q9NUW8 Y_RNA.336-201ENST00000365307 109 ntBASIC2.01□□□□□ -2.09
TDP1Q9NUW8 Y_RNA.337-201ENST00000365312 102 ntBASIC2.01□□□□□ -2.09
TDP1Q9NUW8 RNU6-442P-201ENST00000383968 104 ntBASIC2.01□□□□□ -2.09
TDP1Q9NUW8 RNU6-439P-201ENST00000384188 106 ntBASIC2.01□□□□□ -2.09
TDP1Q9NUW8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TDP1Q9NUW8 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
TDP1Q9NUW8 AL603825.1-201ENST00000438481 80 ntBASIC2.01□□□□□ -2.09
TDP1Q9NUW8 HMGN2P32-201ENST00000444648 269 ntBASIC2.01□□□□□ -2.09
TDP1Q9NUW8 RPL23AP6-201ENST00000446637 472 ntBASIC2.01□□□□□ -2.09
TDP1Q9NUW8 RNU7-12P-201ENST00000516030 62 ntBASIC2.01□□□□□ -2.09
TDP1Q9NUW8 RNU6-365P-201ENST00000517113 106 ntBASIC2.01□□□□□ -2.09
TDP1Q9NUW8 MTND5P41-201ENST00000517498 206 ntBASIC2.01□□□□□ -2.09
TDP1Q9NUW8 MIR378D2-201ENST00000580636 98 ntBASIC2.01□□□□□ -2.09
TDP1Q9NUW8 Y_RNA.66-201ENST00000362862 102 ntBASIC2□□□□□ -2.09
TDP1Q9NUW8 RNU6-833P-201ENST00000363486 107 ntBASIC2□□□□□ -2.09
TDP1Q9NUW8 SNORD116-18-201ENST00000383961 92 ntBASIC2□□□□□ -2.09
TDP1Q9NUW8 RNU6-203P-201ENST00000384038 104 ntBASIC2□□□□□ -2.09
TDP1Q9NUW8 SNRPGP14-201ENST00000435400 219 ntBASIC2□□□□□ -2.09
TDP1Q9NUW8 AC090255.1-201ENST00000495779 349 ntBASIC2□□□□□ -2.09
TDP1Q9NUW8 Y_RNA.666-201ENST00000516187 112 ntBASIC2□□□□□ -2.09
TDP1Q9NUW8 MIR4713-201ENST00000582691 75 ntBASIC2□□□□□ -2.09
TDP1Q9NUW8 SNRPGP19-201ENST00000603826 189 ntBASIC2□□□□□ -2.09
TDP1Q9NUW8 MIR424-201ENST00000362227 98 ntBASIC1.99□□□□□ -2.09
TDP1Q9NUW8 RNU6-268P-201ENST00000364174 107 ntBASIC1.99□□□□□ -2.09
TDP1Q9NUW8 RNU6-978P-201ENST00000364371 103 ntBASIC1.99□□□□□ -2.09
TDP1Q9NUW8 RNU6-449P-201ENST00000383914 107 ntBASIC1.99□□□□□ -2.09
TDP1Q9NUW8 Y_RNA.521-201ENST00000384560 114 ntBASIC1.99□□□□□ -2.09
TDP1Q9NUW8 MIR660-201ENST00000385235 97 ntBASIC1.99□□□□□ -2.09
TDP1Q9NUW8 MIR891A-201ENST00000401237 79 ntBASIC1.99□□□□□ -2.09
TDP1Q9NUW8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms