Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 SNORA80D-201ENST00000384488 135 ntBASIC0.95□□□□□ -2.26
GDF3Q9NR23 Y_RNA.540-201ENST00000384638 111 ntBASIC0.95□□□□□ -2.26
GDF3Q9NR23 MIR598-201ENST00000384868 97 ntBASIC0.95□□□□□ -2.26
GDF3Q9NR23 SNORA26.5-201ENST00000391215 123 ntBASIC0.95□□□□□ -2.26
GDF3Q9NR23 SNORA36B-201ENST00000410438 131 ntBASIC0.95□□□□□ -2.26
GDF3Q9NR23 Y_RNA.602-201ENST00000410535 92 ntBASIC0.95□□□□□ -2.26
GDF3Q9NR23 AC245047.8-201ENST00000456455 284 ntBASIC0.95□□□□□ -2.26
GDF3Q9NR23 NDUFA4P2-201ENST00000489989 244 ntBASIC0.95□□□□□ -2.26
GDF3Q9NR23 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.95□□□□□ -2.26
GDF3Q9NR23 RNA5SP480-201ENST00000516840 109 ntBASIC0.95□□□□□ -2.26
GDF3Q9NR23 JPX_2.1-201ENST00000614161 69 ntBASIC0.95□□□□□ -2.26
GDF3Q9NR23 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.95□□□□□ -2.26
GDF3Q9NR23 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.94□□□□□ -2.26
GDF3Q9NR23 MIR373-201ENST00000362273 69 ntBASIC0.94□□□□□ -2.26
GDF3Q9NR23 Y_RNA.105-201ENST00000363182 111 ntBASIC0.94□□□□□ -2.26
GDF3Q9NR23 Y_RNA.136-201ENST00000363444 102 ntBASIC0.94□□□□□ -2.26
GDF3Q9NR23 RNU6-674P-201ENST00000363831 107 ntBASIC0.94□□□□□ -2.26
GDF3Q9NR23 RNU6-121P-201ENST00000410525 99 ntBASIC0.94□□□□□ -2.26
GDF3Q9NR23 AC063976.4-201ENST00000421971 163 ntBASIC0.94□□□□□ -2.26
GDF3Q9NR23 RNU6-437P-201ENST00000459408 95 ntBASIC0.94□□□□□ -2.26
GDF3Q9NR23 RNU6-764P-201ENST00000516396 105 ntBASIC0.94□□□□□ -2.26
GDF3Q9NR23 SNORA18.7-201ENST00000516910 131 ntBASIC0.94□□□□□ -2.26
GDF3Q9NR23 Y_RNA.711-201ENST00000516993 102 ntBASIC0.94□□□□□ -2.26
GDF3Q9NR23 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.94□□□□□ -2.26
GDF3Q9NR23 AC007742.2-201ENST00000618226 398 ntBASIC0.94□□□□□ -2.26
GDF3Q9NR23 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
GDF3Q9NR23 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
GDF3Q9NR23 RNU4-90P-201ENST00000362773 141 ntBASIC0.93□□□□□ -2.26
GDF3Q9NR23 SNORD14E-201ENST00000364009 85 ntBASIC0.93□□□□□ -2.26
GDF3Q9NR23 MIR520C-201ENST00000385005 87 ntBASIC0.93□□□□□ -2.26
GDF3Q9NR23 MIR15B-201ENST00000385045 98 ntBASIC0.93□□□□□ -2.26
GDF3Q9NR23 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
GDF3Q9NR23 MIR1278-201ENST00000408753 81 ntBASIC0.93□□□□□ -2.26
GDF3Q9NR23 Y_RNA.604-201ENST00000410574 102 ntBASIC0.93□□□□□ -2.26
GDF3Q9NR23 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.93□□□□□ -2.26
GDF3Q9NR23 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.93□□□□□ -2.26
GDF3Q9NR23 RNU7-21P-201ENST00000459430 62 ntBASIC0.93□□□□□ -2.26
GDF3Q9NR23 RNU7-41P-201ENST00000515917 61 ntBASIC0.93□□□□□ -2.26
GDF3Q9NR23 AP003716.2-201ENST00000528260 108 ntBASIC0.93□□□□□ -2.26
GDF3Q9NR23 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.93□□□□□ -2.26
GDF3Q9NR23 MIR4764-201ENST00000580680 88 ntBASIC0.93□□□□□ -2.26
GDF3Q9NR23 MIR2681-201ENST00000581814 105 ntBASIC0.93□□□□□ -2.26
GDF3Q9NR23 AC087685.1-201ENST00000587507 141 ntBASIC0.93□□□□□ -2.26
GDF3Q9NR23 HSPE1P19-201ENST00000603327 295 ntBASIC0.93□□□□□ -2.26
GDF3Q9NR23 AC134026.1-201ENST00000623249 2239 ntBASIC0.93□□□□□ -2.26
GDF3Q9NR23 Y_RNA.380-201ENST00000365663 111 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 Y_RNA.569-201ENST00000384749 103 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 MIR7-2-201ENST00000384970 110 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 Y_RNA.581-201ENST00000391017 97 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 SNORA75.2-201ENST00000391138 150 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 SNORA75.3-201ENST00000391231 150 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 MIR548P-201ENST00000408336 84 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 SNRPGP14-201ENST00000435400 219 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.92□□□□□ -2.26
GDF3Q9NR23 SNORD123-201ENST00000459473 70 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 CYP3A137P-201ENST00000562436 69 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 MIR5000-201ENST00000577717 103 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 MIR3973-201ENST00000579824 107 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 AC005357.1-201ENST00000588399 301 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 PVT1_3.1-201ENST00000620853 95 ntBASIC0.92□□□□□ -2.26
GDF3Q9NR23 AC008163.1-202ENST00000636004 2889 ntBASIC0.91□□□□□ -2.26
GDF3Q9NR23 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
GDF3Q9NR23 RNA5SP264-201ENST00000363115 107 ntBASIC0.91□□□□□ -2.26
GDF3Q9NR23 Y_RNA.158-201ENST00000363651 101 ntBASIC0.91□□□□□ -2.26
GDF3Q9NR23 Y_RNA.216-201ENST00000364205 93 ntBASIC0.91□□□□□ -2.26
GDF3Q9NR23 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.91□□□□□ -2.26
GDF3Q9NR23 ELOCP20-201ENST00000422460 345 ntBASIC0.91□□□□□ -2.26
GDF3Q9NR23 MTCO2P12-201ENST00000427426 682 ntBASIC0.91□□□□□ -2.26
GDF3Q9NR23 MTCO1P5-201ENST00000433573 344 ntBASIC0.91□□□□□ -2.26
GDF3Q9NR23 RNU7-43P-201ENST00000516554 64 ntBASIC0.91□□□□□ -2.26
GDF3Q9NR23 RPL23AP91-201ENST00000569211 455 ntBASIC0.91□□□□□ -2.26
GDF3Q9NR23 MIR3171-201ENST00000584270 74 ntBASIC0.91□□□□□ -2.26
GDF3Q9NR23 AL391516.1-201ENST00000554380 2449 ntBASIC0.91□□□□□ -2.26
GDF3Q9NR23 Y_RNA.214-201ENST00000364201 112 ntBASIC0.9□□□□□ -2.27
GDF3Q9NR23 RNU6-442P-201ENST00000383968 104 ntBASIC0.9□□□□□ -2.27
GDF3Q9NR23 RNU6-342P-201ENST00000384521 104 ntBASIC0.9□□□□□ -2.27
GDF3Q9NR23 RNU6-763P-201ENST00000390865 106 ntBASIC0.9□□□□□ -2.27
GDF3Q9NR23 MTCO2P33-201ENST00000402100 465 ntBASIC0.9□□□□□ -2.27
GDF3Q9NR23 SNORD11-201ENST00000459124 84 ntBASIC0.9□□□□□ -2.27
GDF3Q9NR23 SNORD124-201ENST00000459577 104 ntBASIC0.9□□□□□ -2.27
GDF3Q9NR23 AC098869.1-201ENST00000481627 292 ntBASIC0.9□□□□□ -2.27
GDF3Q9NR23 MRPS35P2-201ENST00000508242 191 ntBASIC0.9□□□□□ -2.27
GDF3Q9NR23 AC020661.2-201ENST00000560114 134 ntBASIC0.9□□□□□ -2.27
GDF3Q9NR23 AC008507.4-201ENST00000585464 127 ntBASIC0.9□□□□□ -2.27
GDF3Q9NR23 AC012676.2-201ENST00000619258 186 ntBASIC0.9□□□□□ -2.27
GDF3Q9NR23 snoU2_19.2-201ENST00000363024 80 ntBASIC0.89□□□□□ -2.27
GDF3Q9NR23 RNU6-797P-201ENST00000363101 109 ntBASIC0.89□□□□□ -2.27
GDF3Q9NR23 RNU6-770P-201ENST00000363929 105 ntBASIC0.89□□□□□ -2.27
GDF3Q9NR23 RNU6-899P-201ENST00000363947 107 ntBASIC0.89□□□□□ -2.27
GDF3Q9NR23 RNU6-268P-201ENST00000364174 107 ntBASIC0.89□□□□□ -2.27
GDF3Q9NR23 Y_RNA.455-201ENST00000384230 98 ntBASIC0.89□□□□□ -2.27
GDF3Q9NR23 SNORD38C-201ENST00000384381 69 ntBASIC0.89□□□□□ -2.27
GDF3Q9NR23 Y_RNA.527-201ENST00000384573 102 ntBASIC0.89□□□□□ -2.27
GDF3Q9NR23 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.89□□□□□ -2.27
GDF3Q9NR23 RNU7-90P-201ENST00000459216 62 ntBASIC0.89□□□□□ -2.27
GDF3Q9NR23 Y_RNA.637-201ENST00000459424 114 ntBASIC0.89□□□□□ -2.27
GDF3Q9NR23 UBL5P1-201ENST00000507979 193 ntBASIC0.89□□□□□ -2.27
GDF3Q9NR23 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
GDF3Q9NR23 RNU6-830P-201ENST00000516353 107 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms