Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MIR627-201ENST00000384979 97 ntBASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 AL445646.1-201ENST00000431784 216 ntBASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 SNRPGP14-201ENST00000435400 219 ntBASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-412P-201ENST00000516434 106 ntBASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 RNU7-70P-201ENST00000516941 66 ntBASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-537P-201ENST00000517277 103 ntBASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 RPL12P50-201ENST00000603116 116 ntBASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 AC006254.2-201ENST00000603259 279 ntBASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 AC015726.2-201ENST00000620112 122 ntBASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 SNORA63.5-201ENST00000363548 123 ntBASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 Y_RNA.281-201ENST00000364774 94 ntBASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 Y_RNA.410-201ENST00000383992 113 ntBASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 SNORA80E-201ENST00000384744 137 ntBASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 MIR196B-201ENST00000384852 84 ntBASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 RNY4P30-201ENST00000410216 95 ntBASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 STAG3L5P-204ENST00000443759 179 ntBASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 COX6CP6-201ENST00000490840 228 ntBASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 MIR5582-201ENST00000579697 68 ntBASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 MIR4762-201ENST00000585261 75 ntBASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 AL035470.1-201ENST00000622571 220 ntBASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 AC022513.1-201ENST00000624512 117 ntBASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SEC61A2Q9H9S3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 MIR342-201ENST00000362212 99 ntBASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 Y_RNA.85-201ENST00000363014 111 ntBASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 U8.5-201ENST00000364528 136 ntBASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 RNU1-91P-201ENST00000364746 163 ntBASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 RNU1-138P-201ENST00000384093 164 ntBASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 AC092427.1-202ENST00000430569 476 ntBASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 AC104389.3-201ENST00000445629 235 ntBASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 RPS29P24-201ENST00000486345 171 ntBASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 Y_RNA.677-201ENST00000516401 85 ntBASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 SNORA31.11-201ENST00000516528 139 ntBASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 RNY4P20-201ENST00000516678 93 ntBASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 MIR5092-201ENST00000583139 88 ntBASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SEC61A2Q9H9S3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 SNORD56.5-201ENST00000364281 72 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 RNU6-440P-201ENST00000390882 105 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 RNA5SP482-201ENST00000391269 118 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 RN7SKP284-201ENST00000411002 343 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 RNU6-938P-201ENST00000411285 103 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 RPS26P48-201ENST00000491713 339 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 AC114811.1-201ENST00000507207 168 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 SNORA18.7-201ENST00000516910 131 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 AP003484.1-201ENST00000530974 250 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 MIR3162-201ENST00000581818 82 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 AC002984.1-201ENST00000591692 448 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 AC021443.1-201ENST00000604478 211 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 U4atac.1-201ENST00000618345 95 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 AC009831.4-201ENST00000620744 325 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 AC106754.2-201ENST00000623006 233 ntBASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.26□□□□□ -2.05
SEC61A2Q9H9S3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 RNU6-349P-201ENST00000362402 107 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 RNA5SP393-201ENST00000363423 117 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 Y_RNA.440-201ENST00000384120 114 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 MT-TI-201ENST00000387365 69 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 U8.17-201ENST00000391292 132 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 BX510359.4-201ENST00000423750 193 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 SNX2P2-201ENST00000424553 323 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 RPS12P2-201ENST00000439728 269 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 SUMO2P16-201ENST00000519475 264 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 AC026271.5-201ENST00000577873 130 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 MIR4446-201ENST00000578505 67 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 HSPE1P19-201ENST00000603327 295 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 MIR8054-201ENST00000620877 86 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 AL596211.1-201ENST00000569873 2277 ntBASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
SEC61A2Q9H9S3 RNU6-414P-201ENST00000363705 104 ntBASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 RNU1-133P-201ENST00000364867 167 ntBASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 Y_RNA.351-201ENST00000365436 96 ntBASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 RNU6-756P-201ENST00000383997 107 ntBASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 RNU6-163P-201ENST00000384396 106 ntBASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms