Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RNY3-201ENST00000365484 102 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
DDX47Q9H0S4 U8.17-201ENST00000391292 132 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 MIR1278-201ENST00000408753 81 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 RNA5SP95-201ENST00000410319 137 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 SNORA36B-201ENST00000410438 131 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 RNU2-14P-201ENST00000411053 191 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.66□□□□□ -2.3
DDX47Q9H0S4 AC067940.1-201ENST00000458411 300 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 RNU7-141P-201ENST00000459304 62 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 AC098869.1-201ENST00000481627 292 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 Y_RNA.713-201ENST00000517013 96 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 AP003484.1-201ENST00000530974 250 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 MIR2681-201ENST00000581814 105 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 SNORA4-201ENST00000584302 138 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
DDX47Q9H0S4 RNU4-80P-201ENST00000363200 141 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 RNU6-674P-201ENST00000363831 107 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.370-201ENST00000365589 108 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.383-201ENST00000383855 97 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 SNORA72.4-201ENST00000384174 132 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 RNY1P14-201ENST00000384426 108 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.526-201ENST00000384572 110 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 SNORA2B-201ENST00000384583 137 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 SNORD72-201ENST00000390994 80 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 MTCO2P33-201ENST00000402100 465 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 RNU6-613P-201ENST00000410412 108 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 RNU6-130P-201ENST00000411112 103 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 AC005534.2-201ENST00000431047 433 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 AC236972.2-201ENST00000434979 310 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 RPL23AP91-201ENST00000569211 455 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 PART1_1.1-201ENST00000611761 217 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.65□□□□□ -2.31
DDX47Q9H0S4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.65□□□□□ -2.31
DDX47Q9H0S4 RNU6-801P-201ENST00000364087 105 ntBASIC0.64□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.286-201ENST00000364813 102 ntBASIC0.64□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.356-201ENST00000365475 113 ntBASIC0.64□□□□□ -2.31
DDX47Q9H0S4 RNU6-42P-201ENST00000384165 107 ntBASIC0.64□□□□□ -2.31
DDX47Q9H0S4 RNY3P14-201ENST00000384309 102 ntBASIC0.64□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.471-201ENST00000384312 102 ntBASIC0.64□□□□□ -2.31
DDX47Q9H0S4 AL603910.2-201ENST00000407268 136 ntBASIC0.64□□□□□ -2.31
DDX47Q9H0S4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.64□□□□□ -2.31
DDX47Q9H0S4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.64□□□□□ -2.31
DDX47Q9H0S4 POLR2KP2-201ENST00000438155 177 ntBASIC0.64□□□□□ -2.31
DDX47Q9H0S4 RNU7-181P-201ENST00000517234 74 ntBASIC0.64□□□□□ -2.31
DDX47Q9H0S4 AC005357.1-201ENST00000588399 301 ntBASIC0.64□□□□□ -2.31
DDX47Q9H0S4 AL136317.1-201ENST00000612653 226 ntBASIC0.64□□□□□ -2.31
DDX47Q9H0S4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.63□□□□□ -2.31
DDX47Q9H0S4 RNU4-50P-201ENST00000364361 141 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 RNU6-1009P-201ENST00000390996 107 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 MIR1827-201ENST00000408549 66 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 SNORD11-201ENST00000459124 84 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.673-201ENST00000516306 88 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 MIR2115-201ENST00000516657 100 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 AC040926.1-201ENST00000530195 238 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 AC133485.1-201ENST00000567176 124 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 MIR5000-201ENST00000577717 103 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 AC012433.1-201ENST00000588916 398 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 AC006157.1-201ENST00000611750 366 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 AC006441.5-201ENST00000612680 209 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 AC015726.2-201ENST00000620112 122 ntBASIC0.63□□□□□ -2.31
DDX47Q9H0S4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.122-201ENST00000363331 96 ntBASIC0.62□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.813-201ENST00000364639 102 ntBASIC0.62□□□□□ -2.31
DDX47Q9H0S4 SNORA51.10-201ENST00000384418 136 ntBASIC0.62□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.537-201ENST00000384626 109 ntBASIC0.62□□□□□ -2.31
DDX47Q9H0S4 RNU6-1067P-201ENST00000384752 107 ntBASIC0.62□□□□□ -2.31
DDX47Q9H0S4 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
DDX47Q9H0S4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.62□□□□□ -2.31
DDX47Q9H0S4 MTND5P20-201ENST00000448677 143 ntBASIC0.62□□□□□ -2.31
DDX47Q9H0S4 SEPT14P8-201ENST00000508026 178 ntBASIC0.62□□□□□ -2.31
DDX47Q9H0S4 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
DDX47Q9H0S4 MIR548AO-201ENST00000579992 96 ntBASIC0.62□□□□□ -2.31
DDX47Q9H0S4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.62□□□□□ -2.31
DDX47Q9H0S4 SNORD113-5-201ENST00000607261 78 ntBASIC0.62□□□□□ -2.31
DDX47Q9H0S4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
DDX47Q9H0S4 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.579-201ENST00000390939 94 ntBASIC0.61□□□□□ -2.31
DDX47Q9H0S4 SNORA26.5-201ENST00000391215 123 ntBASIC0.61□□□□□ -2.31
DDX47Q9H0S4 AC244098.3-201ENST00000424803 96 ntBASIC0.61□□□□□ -2.31
DDX47Q9H0S4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.61□□□□□ -2.31
DDX47Q9H0S4 RNU4-57P-201ENST00000515980 135 ntBASIC0.61□□□□□ -2.31
DDX47Q9H0S4 RMST_2.1-201ENST00000617263 136 ntBASIC0.61□□□□□ -2.31
DDX47Q9H0S4 MIR6734-201ENST00000621166 68 ntBASIC0.61□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.168-201ENST00000363740 102 ntBASIC0.6□□□□□ -2.31
DDX47Q9H0S4 RNU6-396P-201ENST00000365369 105 ntBASIC0.6□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.355-201ENST00000365462 98 ntBASIC0.6□□□□□ -2.31
DDX47Q9H0S4 RNU6-1248P-201ENST00000391096 64 ntBASIC0.6□□□□□ -2.31
DDX47Q9H0S4 RNU1-119P-201ENST00000391122 165 ntBASIC0.6□□□□□ -2.31
DDX47Q9H0S4 RNU6-475P-201ENST00000516073 104 ntBASIC0.6□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.702-201ENST00000516843 96 ntBASIC0.6□□□□□ -2.31
DDX47Q9H0S4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.6□□□□□ -2.31
DDX47Q9H0S4 AC011195.1-201ENST00000578177 177 ntBASIC0.6□□□□□ -2.31
DDX47Q9H0S4 MIR548S-201ENST00000581352 82 ntBASIC0.6□□□□□ -2.31
DDX47Q9H0S4 MIR4801-201ENST00000582704 82 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms