Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC104389.3-201ENST00000445629 235 ntBASIC2.62□□□□□ -1.99
FOXP3Q9BZS1 RNA5SP82-201ENST00000516707 92 ntBASIC2.62□□□□□ -1.99
FOXP3Q9BZS1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.62□□□□□ -1.99
FOXP3Q9BZS1 AC026271.5-201ENST00000577873 130 ntBASIC2.62□□□□□ -1.99
FOXP3Q9BZS1 MIR4679-2-201ENST00000578358 77 ntBASIC2.62□□□□□ -1.99
FOXP3Q9BZS1 MIR6817-201ENST00000615588 66 ntBASIC2.62□□□□□ -1.99
FOXP3Q9BZS1 MIR6715A-201ENST00000615929 79 ntBASIC2.62□□□□□ -1.99
FOXP3Q9BZS1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.62□□□□□ -1.99
FOXP3Q9BZS1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
FOXP3Q9BZS1 RNU6-1084P-201ENST00000362498 107 ntBASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 RNA5SP68-201ENST00000363885 119 ntBASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 RNU6-268P-201ENST00000364174 107 ntBASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 snoU2-30.1-201ENST00000365012 70 ntBASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 Y_RNA.528-201ENST00000384575 108 ntBASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 MIR1261-201ENST00000408659 82 ntBASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 RNA5SP136-201ENST00000410906 107 ntBASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 AC245047.3-201ENST00000429428 127 ntBASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 AL513328.1-201ENST00000446460 224 ntBASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 AC011753.1-201ENST00000451001 220 ntBASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 RNA5SP148-201ENST00000516527 94 ntBASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 RNU7-25P-201ENST00000516544 62 ntBASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 RNU7-28P-201ENST00000516759 62 ntBASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 AL137067.1-201ENST00000615933 120 ntBASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
FOXP3Q9BZS1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
FOXP3Q9BZS1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXP3Q9BZS1 RNA5SP456-201ENST00000364002 114 ntBASIC2.6□□□□□ -1.99
FOXP3Q9BZS1 Y_RNA.336-201ENST00000365307 109 ntBASIC2.6□□□□□ -1.99
FOXP3Q9BZS1 RNU6-1189P-201ENST00000383958 107 ntBASIC2.6□□□□□ -1.99
FOXP3Q9BZS1 RPS26P48-201ENST00000491713 339 ntBASIC2.6□□□□□ -1.99
FOXP3Q9BZS1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.6□□□□□ -1.99
FOXP3Q9BZS1 SNORD45.4-201ENST00000516629 73 ntBASIC2.6□□□□□ -1.99
FOXP3Q9BZS1 RNA5SP402-201ENST00000517148 110 ntBASIC2.6□□□□□ -1.99
FOXP3Q9BZS1 AC080100.1-201ENST00000624239 5356 ntBASIC2.6□□□□□ -1.99
FOXP3Q9BZS1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.6□□□□□ -1.99
FOXP3Q9BZS1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -1.99
FOXP3Q9BZS1 Y_RNA.43-201ENST00000362670 111 ntBASIC2.59□□□□□ -1.99
FOXP3Q9BZS1 SNORD115-28-201ENST00000363931 81 ntBASIC2.59□□□□□ -1.99
FOXP3Q9BZS1 Y_RNA.366-201ENST00000365540 102 ntBASIC2.59□□□□□ -1.99
FOXP3Q9BZS1 Y_RNA.547-201ENST00000384654 119 ntBASIC2.59□□□□□ -1.99
FOXP3Q9BZS1 SNORA11.4-201ENST00000408823 129 ntBASIC2.59□□□□□ -1.99
FOXP3Q9BZS1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.59□□□□□ -1.99
FOXP3Q9BZS1 COX6CP6-201ENST00000490840 228 ntBASIC2.59□□□□□ -1.99
FOXP3Q9BZS1 AC104984.5-201ENST00000586878 94 ntBASIC2.59□□□□□ -1.99
FOXP3Q9BZS1 AC005786.1-201ENST00000588553 154 ntBASIC2.59□□□□□ -1.99
FOXP3Q9BZS1 MIR203B-201ENST00000636080 86 ntBASIC2.59□□□□□ -1.99
FOXP3Q9BZS1 AC008555.8-201ENST00000623602 2168 ntBASIC2.59□□□□□ -2
FOXP3Q9BZS1 Y_RNA.37-201ENST00000362606 108 ntBASIC2.58□□□□□ -2
FOXP3Q9BZS1 Y_RNA.265-201ENST00000364677 108 ntBASIC2.58□□□□□ -2
FOXP3Q9BZS1 Y_RNA.281-201ENST00000364774 94 ntBASIC2.58□□□□□ -2
FOXP3Q9BZS1 SNORA80E-201ENST00000384744 137 ntBASIC2.58□□□□□ -2
FOXP3Q9BZS1 MIR570-201ENST00000384917 97 ntBASIC2.58□□□□□ -2
FOXP3Q9BZS1 MIR29C-201ENST00000385231 88 ntBASIC2.58□□□□□ -2
FOXP3Q9BZS1 MIR524-201ENST00000385242 87 ntBASIC2.58□□□□□ -2
FOXP3Q9BZS1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.58□□□□□ -2
FOXP3Q9BZS1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.58□□□□□ -2
FOXP3Q9BZS1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
FOXP3Q9BZS1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
FOXP3Q9BZS1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
FOXP3Q9BZS1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.57□□□□□ -2
FOXP3Q9BZS1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
FOXP3Q9BZS1 RNU1-58P-201ENST00000362413 163 ntBASIC2.57□□□□□ -2
FOXP3Q9BZS1 Y_RNA.309-201ENST00000365046 111 ntBASIC2.57□□□□□ -2
FOXP3Q9BZS1 SNORA2.2-201ENST00000365473 135 ntBASIC2.57□□□□□ -2
FOXP3Q9BZS1 RNA5SP109-201ENST00000391010 116 ntBASIC2.57□□□□□ -2
FOXP3Q9BZS1 HMGN2P32-201ENST00000444648 269 ntBASIC2.57□□□□□ -2
FOXP3Q9BZS1 RNU6-412P-201ENST00000516434 106 ntBASIC2.57□□□□□ -2
FOXP3Q9BZS1 RNA5SP170-201ENST00000517150 101 ntBASIC2.57□□□□□ -2
FOXP3Q9BZS1 U4.3-201ENST00000621047 82 ntBASIC2.57□□□□□ -2
FOXP3Q9BZS1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.57□□□□□ -2
FOXP3Q9BZS1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
FOXP3Q9BZS1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.57□□□□□ -2
FOXP3Q9BZS1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
FOXP3Q9BZS1 AC245060.5-201ENST00000610778 3293 ntBASIC2.56□□□□□ -2
FOXP3Q9BZS1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.56□□□□□ -2
FOXP3Q9BZS1 AL445646.1-201ENST00000431784 216 ntBASIC2.56□□□□□ -2
FOXP3Q9BZS1 RNU6-168P-201ENST00000516189 101 ntBASIC2.56□□□□□ -2
FOXP3Q9BZS1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.56□□□□□ -2
FOXP3Q9BZS1 AC022202.1-201ENST00000613515 211 ntBASIC2.56□□□□□ -2
FOXP3Q9BZS1 MIR8054-201ENST00000620877 86 ntBASIC2.56□□□□□ -2
FOXP3Q9BZS1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.56□□□□□ -2
FOXP3Q9BZS1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
FOXP3Q9BZS1 SNORD115-3-201ENST00000363100 82 ntBASIC2.55□□□□□ -2
FOXP3Q9BZS1 Y_RNA.116-201ENST00000363292 103 ntBASIC2.55□□□□□ -2
FOXP3Q9BZS1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
FOXP3Q9BZS1 RNU1-52P-201ENST00000384190 164 ntBASIC2.55□□□□□ -2
FOXP3Q9BZS1 RNU6-440P-201ENST00000390882 105 ntBASIC2.55□□□□□ -2
FOXP3Q9BZS1 RNA5SP89-201ENST00000410300 108 ntBASIC2.55□□□□□ -2
FOXP3Q9BZS1 RNU6-938P-201ENST00000411285 103 ntBASIC2.55□□□□□ -2
FOXP3Q9BZS1 RNU6-240P-201ENST00000516098 97 ntBASIC2.55□□□□□ -2
FOXP3Q9BZS1 SNORD36C-201ENST00000516733 66 ntBASIC2.55□□□□□ -2
FOXP3Q9BZS1 AC007012.1-201ENST00000567192 175 ntBASIC2.55□□□□□ -2
FOXP3Q9BZS1 AC069114.2-201ENST00000604699 304 ntBASIC2.55□□□□□ -2
FOXP3Q9BZS1 AL137847.3-201ENST00000611521 109 ntBASIC2.55□□□□□ -2
FOXP3Q9BZS1 AL590808.1-201ENST00000618696 141 ntBASIC2.55□□□□□ -2
FOXP3Q9BZS1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
FOXP3Q9BZS1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
FOXP3Q9BZS1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms