Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HERPUD2Q9BSE4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
HERPUD2Q9BSE4 Y_RNA.83-201ENST00000363005 113 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.199-201ENST00000364014 102 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.292-201ENST00000364904 97 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.456-201ENST00000384232 111 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 SNORA72-201ENST00000384339 132 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 MIR320A-201ENST00000385302 82 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 SNORA67.5-201ENST00000391036 107 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 MIR891A-201ENST00000401237 79 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 MIR1323-201ENST00000408090 73 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-394P-201ENST00000410735 107 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 AC104332.1-201ENST00000440471 797 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 SNORD2.1-201ENST00000458762 69 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 SNORD13-201ENST00000459299 104 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 CYCTP-201ENST00000504253 315 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 RNA5SP458-201ENST00000516188 119 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-922P-201ENST00000516753 99 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 RNU7-116P-201ENST00000516940 62 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 MIR4308-201ENST00000580634 81 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 AL591926.4-201ENST00000616895 298 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 U6.104-201ENST00000637979 90 ntBASIC1.65□□□□□ -2.15
HERPUD2Q9BSE4 MIRLET7C-201ENST00000362160 84 ntBASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-818P-201ENST00000364837 108 ntBASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 SNORA2.2-201ENST00000365473 135 ntBASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.368-201ENST00000365547 113 ntBASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.383-201ENST00000383855 97 ntBASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-1248P-201ENST00000391096 64 ntBASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 AL451046.2-201ENST00000403074 277 ntBASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 MIR548I2-201ENST00000408348 149 ntBASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-1135P-201ENST00000411083 103 ntBASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 MLLT10P1-201ENST00000418346 262 ntBASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 MTCO1P5-201ENST00000433573 344 ntBASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 RPS29P23-201ENST00000458635 123 ntBASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-789P-201ENST00000517105 102 ntBASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 AC120024.3-201ENST00000603167 156 ntBASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.64□□□□□ -2.15
HERPUD2Q9BSE4 UBE2WP1-201ENST00000362030 340 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.44-201ENST00000362676 108 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.82-201ENST00000363000 102 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.92-201ENST00000363043 102 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.136-201ENST00000363444 102 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.217-201ENST00000364214 105 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.235-201ENST00000364412 102 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.275-201ENST00000364726 110 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.306-201ENST00000365015 102 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.310-201ENST00000365063 113 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.312-201ENST00000365089 102 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.322-201ENST00000365151 102 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-326P-201ENST00000365480 107 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-1323P-201ENST00000384025 107 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 RNU5E-9P-201ENST00000411164 104 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 AL138752.1-201ENST00000452964 351 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.650-201ENST00000459002 102 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.641-201ENST00000459414 105 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.777-201ENST00000516982 102 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.714-201ENST00000517065 90 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-1116P-201ENST00000517269 99 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 AC024405.2-202ENST00000532731 184 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 AC090049.2-201ENST00000550377 109 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 MIR3145-201ENST00000580727 82 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 POLR3GP1-201ENST00000594073 261 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.771-201ENST00000598668 102 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 AL365265.1-201ENST00000621045 234 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.789-201ENST00000622480 102 ntBASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.63□□□□□ -2.15
HERPUD2Q9BSE4 RNU4-90P-201ENST00000362773 141 ntBASIC1.62□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-833P-201ENST00000363486 107 ntBASIC1.62□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.270-201ENST00000364693 104 ntBASIC1.62□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-804P-201ENST00000384286 107 ntBASIC1.62□□□□□ -2.15
HERPUD2Q9BSE4 COX6CP14-201ENST00000469580 174 ntBASIC1.62□□□□□ -2.15
HERPUD2Q9BSE4 AC091959.1-201ENST00000495857 238 ntBASIC1.62□□□□□ -2.15
HERPUD2Q9BSE4 RNU7-200P-201ENST00000516105 62 ntBASIC1.62□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-1219P-201ENST00000516143 112 ntBASIC1.62□□□□□ -2.15
HERPUD2Q9BSE4 RNU2-31P-201ENST00000516954 155 ntBASIC1.62□□□□□ -2.15
HERPUD2Q9BSE4 MRPS18CP4-201ENST00000535821 231 ntBASIC1.62□□□□□ -2.15
HERPUD2Q9BSE4 AP000942.3-201ENST00000603702 160 ntBASIC1.62□□□□□ -2.15
HERPUD2Q9BSE4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.62□□□□□ -2.15
HERPUD2Q9BSE4 AC027279.3-201ENST00000625055 122 ntBASIC1.62□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-1084P-201ENST00000362498 107 ntBASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-653P-201ENST00000363074 106 ntBASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.240-201ENST00000364469 95 ntBASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.569-201ENST00000384749 103 ntBASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 MIR653-201ENST00000385279 96 ntBASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.793-201ENST00000411222 111 ntBASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 AL606753.1-201ENST00000427435 87 ntBASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 SNORA27.4-201ENST00000516650 95 ntBASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.703-201ENST00000516846 111 ntBASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 AP002392.1-201ENST00000537692 208 ntBASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
HERPUD2Q9BSE4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HERPUD2Q9BSE4 Y_RNA.253-201ENST00000364562 112 ntBASIC1.6□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-923P-201ENST00000364753 107 ntBASIC1.6□□□□□ -2.15
HERPUD2Q9BSE4 SNORD26-201ENST00000384147 75 ntBASIC1.6□□□□□ -2.15
HERPUD2Q9BSE4 RNU6-1289P-201ENST00000384431 106 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 279.1 ms